Online materials for teaching plant biology to undergraduates: Teaching Tools in Plant Biology

Posted by on October 13th, 2011

Teaching Tools in Plant Biology is an online educational resource published by The Plant Cell and the American Society of Plant Biologists.  Each Teaching Tool includes a set of about 100 PowerPoint slides, a review article suitable for undergraduates with hyperlinked reading lists, and a teaching guide that includes learning objectives and discussion questions. Each article is peer-reviewed and incorporates broad introductory materials as well as some in-depth analysis of key experiments, so can be tailored for use with a variety of students, and each is updated annually. Topics include Leaf Development, Epigenetics, Phytohormones, Why Study Plants and Genetic Improvements in Agriculture. Teaching Tools are available to personal or institutional subscribers of The Plant Cell, but the first six articles, including Leaf Development and Epigenetics, do not require a subscription. We also have a FaceBook page on which we highlight timely topics of interest to teachers of plant development, genetics, molecular and cell biology and physiology. Please have a look and use any materials you like. We’re always happy for feedback! Send comments to mwilliams@aspb.org.
GD Star Rating
loading…
Share

Tags , , , , , ,
Category Education | 2 Comments »

First course on insect neuroscience and Drosophila neurogenetics in Uganda

Posted by on October 7th, 2011

This is the first post of others to come on the first course on insect neuroscience and Drosophila neurogenetics in Uganda, that is being partially funded by The Company of Biologist. The motivation for organizing the course is that currently in East Africa, and most parts of Africa, research in experimental neuroscience is carried out mostly with rats, which are expensive. However, almost no one is using Drosophila, an inexpensive model organism that in Europe and the U.S is leading in neuroscience and basic medical research. The course will include theoretical and practical (laboratory) sessions. It is intended for graduate students and Junior Faculty who are interested or involved in teaching or doing research in neuroscience at universities in Africa. This year course will start next week, and thanks to the support from The Company of Biologist, we will be welcoming students from Uganda, Tanzania, Kenya, Malawi, Nigeria, and Cameroon. The people involved in the project include a local organizing committee that is taking care of all the organization in Ishaka (where the medical campus of the Kampala International University is based, place where the course will take place), and faculty: Dr. BadenDr. Palacios, Dr. Martin-Bermudo, Dr. Vicente, and myself (Dr. Prieto Godino). I will post here some other general posts about the course, but if you are interested and you would like to know more about it, and how it is running everyday you can follow our Facebook or our blog pages.
GD Star Rating
loading…
Share

Category Education | 5 Comments »

PhD Movie

Posted by on September 26th, 2011

Whether you’re familiar with the web comic or not, most of you will probably recognize your own current or past career as a graduate student in the new PHD Comics movie.

PHD Movie Trailer from PHD Comics on Vimeo.



It’s playing at university campuses across the world. If your city is not on the list, don’t fret: the website contains information on how to organise a screening at your own institute. Now if someone in Cambridge would like to host a screening, I’ll be there!

(See last year’s interview with Jorge Cham on the Node.)
GD Star Rating
loading…
Share

Tags ,
Category Education, Video | No Comments »

OIST Developmental Neurobiology Course 2011

Posted by on September 20th, 2011


Okinawa institute of Science and technology (OIST), situated on Okinawa Island is an ideal and inspiring place to discuss and learn science. The student participants and mentors of the developmental neurobiology course (July 17- 31, 2011) were from every corner of the globe. The course began with a wonderful talk about history of developmental neuroscience by David Van Vactor. M.A Price spoke about the signaling mechanisms during early development of Drosophila embryo.  James Briscoe from MRC London discussed about brain and neural tube development in vertebrates. Explained, “How does neurogenesis begin and how do neural stem cells maintain their fate”.  Chris Q. Doe from Oregon USA very elegantly described the mechanisms involved. Prof. Ischiro Masai from OIST Japan explained factors involved in spatial and temporal pattern of neurogenesis in Zebra fish retina. Kozo Kaibuchi from Nagoya University, Japan presented how internal and external signals regulate neuronal polarity. How do axon find their right partners and make neural connections, were the major focus of Elke Stien, Hitashi Sakano and J Huang. Students very enthusiastically and actively discussed their work too during the poster sessions in between.  After two days of intense lab work at the main campus, participants could also visit the labs of various groups. Personally talk to researchers and use the lab facilities for experimental work. Drosophila and Zebra fish were mainly used during the practical sessions in the course.  Students learned dye injection into embryonic Zebra fish eye to visualize the connections in wild type animals and then compare with the mutant animals. They got opportunity to do live imaging using Zebra fish and Drosophila embryos. Dissection of embryonic and larval Drosophila nervous system was also performed during the session. Participants could visualize and experience good microscopy by trying out their samples on microscopes from the Institute imaging facility. We also utilized and tried out different kinds of microscopes, which were provided by various companies in the workshop. Image analysis soft wares were also used for data analysis.

Second week of the course started with session on axon targeting and synapse specificity. Akiko Nose from Tokyo University taught how the connections are made and then refined to form a proper functional synapse. He showed some nice movies using optogenetics as a tool. The molecular mechanisms for dendritic self-avoidance and tiling, how is dendritic field size regulated and how are these maintained over time were the major themes of the Prof. Yuh Nung Jan’s talk. He also explained how fruit fly maggots avoid sunlight and described in detail how class IV dendritic arborisation neurons with elaborate dendrites tiling the entire body wall, act as light-sensing antennae. Van Vactor from Harvard school of Medicine shed light on the posttranscriptional machinery of growth cone involved in regulation of synapse assembly. He also discussed his recent findings from the lab about modelling spinal muscular atrophy, a severe neurogenic disease in Drosophila. Vijay from NCBS India explained, how the behaviour output is generated, once the neural circuits are established. He illustrated various assays to quantify behaviour deficits in mutant animals. At the end of the session Hitoshi Okamoto from RIKEN brain Institute described how Zebra fish could be used as a model to study vertebrate behaviour. He explained various behaviour assays to study learning and memory in Zebra fish. We relaxed and also got chance to show our non-scientific talents in the party and dinner at faculty house located nearby the seaside house. We also visited Castle and Aquarium during the course. After fun and enjoyment we attend talk by David Feldhiem, who described how graded expression of Ephrins is involved in generation of topography in vertebrate visual system. Bernando sabatini discussed about various high resolution imaging techniques utilised to study active synaptic connections. In the last of course Takeharu Nagai described broad range of fluorescent probes to image the synaptic structures and how to choose a good fluorescent probe for your experiments. Prof Hideyuki Okano discussed about iPSCs and their use in treating various neurological disorders and injury. Prof. Lee Rubin at the end of the course demonstrated how we could do large-scale drug screening in the lab in collaboration with pharmaceutical companies to treat challenging nervous system disorders. Last but not least, at the end of the last supper, we enjoyed the traditional Japanese dance and Judo Karate. In short this course was full of fun and learning.

You can read more about OIST and Course here

http://www.oist.jp/en/press-room/news-articles/151/1062-dnc2011.html

and watch this video also.


GD Star Rating
loading…
Share

Category Education, Events, Research | No Comments »

The Wonder of Stem Cells

Posted by on August 12th, 2011

At the ISSCR meeting in Toronto in June I noticed this display at the top of the escalators:


These fabrics with patterns related to stem cells are part of an ongoing exhibition at Toronto’s Ontario Science Centre (OSC). In collaboration with the Stem Cell Network, the “Super Cells: The Wonder of Stem Cells” exhibit displays stem cell-inspired work by students from art schools across the city of Toronto.

At the museum itself, this is one of the works on display:

Stem Cell Fashion
(Image by Ricardipus on Flickr, used with permission. Click image for more info.)

The fashion aspect of the exhibit reminds me a bit of Primitive Streak, but Super Cells covers other art forms as well.

From the press release:

“This year marks the 50th anniversary of the discovery of stem cells by Canadian scientists Drs. James Till and Ernest McCulloch. “Till and McCulloch’s discovery in 1961 was unparalleled at the time and their findings continue to influence the field of stem cell research to this day,” said Drew Lyall, Executive Director of the Stem Cell Network. “This exhibition is a fitting tribute to their work, which took place here in Toronto.” “

In addition to the exhibit, the museum also organised Skype chats with stem cell researchers during the ISSCR meeting. Visitors to the science centre could ask delegates of the ISSCR meeting about their research via Skype. I didn’t get a chance to see this at the conference (so I don’t know who was interviewed), but the chats will hopefully be posted on the science centre’s YouTube channel.

Super Cells is at the Ontario Science Centre until October 2nd, 2011. If you’re in Toronto before then, take a look. The rest of the museum is really great as well!
GD Star Rating
loading…
Share

Tags , , ,
Category Education, Events, Images, News | 1 Comment »

Top Developmental Biologists meet in Chile for a laboratory and lecture course: open to Latin American and International applicants

Posted by on July 25th, 2011

Eric Wieschaus , John Gurdon, Claudio Stern, Alejandro Sanchez-Alvarado, among others, will teach, hands-on, the paradigms, problems and technologies of modern Developmental Biology.  The course will take place in the beautiful fishing village of Quintay, at the Centre for Marine Biological Research (CIMARQ).   

The course is intended primarily for Latin American student but it is also open to no-Latin American applicants. We believe that the interaction between the students will establish links and promote a culture of international collaboration that will further contribute to the field.

More information about the course in:

http://biodesarrollo.unab.cl/
GD Star Rating
loading…
Share

Tags , , ,
Category Education, Events | No Comments »

Science – The Bigger Picture

Posted by on May 1st, 2011

This is a retelling of the student and post-doc workshop from the second day of the BSDB/BSCB joint spring meeting that took place in Canterbury at the University of Kent. The session emphasised the need for accurate science and scientific involvement in public communication. It ended up a bit longer than I’d intended, but this is something I’m really enthusiastic about and felt it needed to be shared in detail. I hope you find it helpful.




Panellists:

Dr Peter Wilmshurst – A consultant cardiologist, known for his refusal to falsify or withhold data in pharmaceutical studies. He was being sued for libel and slander by NMT medical until the company entered liquidation in April.

Rose Wu – A representative for the charity Sense about Science which works tirelessly despite limited funding to improve the public image of science, aids accurate reporting of scientific issues in the media and campaigns for further government support for research.

Dr Jenny Rohn – A UCL post-doc by day. Also known for her punditry, she runs the popular science communication website lablit.com has been interviewed numerous times for tv and radio. She has published numerous stories and editorials and two fictional novels Experimental Heart and The Honest Look, communicating science through the engaging and emotional personal lives of scientists. She was also central to the campaign to save UK science funding.

Read the rest of this entry »
GD Star Rating
loading…
Share

Category Discussion, Education, Funding, News, Research | No Comments »

Wellcome to the Node

Posted by on April 19th, 2011



Hello ‘the Node’, it’s very nice to be here. :) This is the first of my cross-posts between the Wellcome Trust and The Node talking about myself and the research I’m doing in my PhD. You can find my first posts for the Wellcome Trust here and here. I try to write in a way that is accessible to all, so I hope you enjoy them.

Hopefully, science permitting, you’ll be seeing a lot more of me around here and I’m looking forward to meeting many of you at the upcoming BSDB-BSCB spring meeting.

Me, myself and my PhD

Hi, I’m Jonathan Lawson and I’m here to share my experiences as a developmental biology PhD student in Cambridge. I’m 23 and have already spent four years in Cambridge as an undergraduate, which gave me a BA/MSci in Biochemistry. Although I spend a lot of time in the lab, outside of work I spend a lot of time dancing and my other major passion is baking. I am currently web editor for the student run Cambridge science magazine BlueSci. I am writing these blogs as part of a collaboration between The Node and my benefactors, the Wellcome Trust.

My course is one of the Trust’s Four-year PhD Programmes, it is unusual in that, in the first year, we have a choice of labs we can join, spread across different departments at the University. Each student chooses three labs to join, each for a short nine-week project. This is too short a time to make any significant contributions, but it does allow you to get a good idea of what work is going on in the lab, and whether you will fit in well with the social dynamic. At the end of the first year we choose to join one of these labs for our full 3-year PhD project. This allows students to better understand a lab, and the work, before joining for the long-term, the idea being that students generally feel happier and are more likely to complete their PhD.

Read the rest of this entry »
GD Star Rating
loading…
Share

Category Careers, Education, Funding, Lab Life, Research | 1 Comment »

Marion Silies wins GfE thesis award

Posted by on March 31st, 2011

Every two years, the German society for developmental biology (Gesellschaft für Entwicklungsbiologie - GfE) hands out an award for the best PhD thesis of the previous two years. At their society meeting last week, this award went to Marion Silies, for her PhD thesis on glial cell migration.

I met up with Marion after her talk and asked a few questions about her PhD work in Christian Klämbt’s lab, and whether she had any tips for graduate students.


Congratulations on your award. What was your thesis about?
I worked on glial cell migration in the fly peripheral nervous system. I looked at how neurons and glial cells co-regulate their development. In a screen we found a cell cycle regulator with strong phenotypes in the migration of glial cells, but I showed that it has a post-mitotic function, so a function outside of its function in cell cycle: it controls glial cell migration from the neuron, by regulating distribution of a cell adhesion molecule.

What are you doing now? Are you still working on the nervous system?
For my PhD I studied developmental processes, but for my postdoc I moved on to understand how the nervous system functions. I’m in the lab of Tom Clandinin now, at Stanford University.

Did you have to come back to Germany just to pick up your award?
I would have loved to come just for this meeting, but I was actually in Germany anyway for another meeting, so this just fit very well.

Do you have any tips for current or new PhD students?
My tip for students about to start their PhD would be to pick something that they’re really excited about. I think this is the most important thing: A PhD takes a long time, and you put in a lot of work, so try to find something that you really like. A lot of people think that they have to be at a very prestigious university, or at a very well-known institute. I would say: go wherever you want – just find something that you really like to do, and find a nice boss.
Read the rest of this entry »
GD Star Rating
loading…
Share

Tags ,
Category Careers, Education, Interview | No Comments »

The Third USNCB Symposium on Frontiers in Biomechanics: Mechanics of Development

Posted by on March 8th, 2011

The Third USNCB Symposium on Frontiers in Biomechanics: Mechanics of Development

June 21, 2011, Nemacolin Woodlands Resort, Farmington, PA

In the fields of tissue engineering, synthetic biology, and regenerative medicine, much can be learned by studying how nature creates tissues and organs in the embryo. Accordingly, the last decade has seen rapidly expanding interest among engineers in developmental mechanics. Sponsored by the United States National Committee on Biomechanics (USNCB), this Frontiers Meeting will bring together biologists, engineers, and biophysicists to discuss the state of the art and future directions in this exciting field. The meeting will have a single track of oral sessions and free communications presented in poster format.

For more information, please visit

http://www.engineering.pitt.edu/USNCB2011/

Conference Co-Chairs:
Larry Taber (lat@wustl.edu), Lance Davidson (lad43@pitt.edu)
GD Star Rating
loading…
Share

Tags , , , , ,
Category Careers, Education, Events | No Comments »


Copyright 2010 - 2012 The Company of Biologists Ltd

Company of Biologists