Welcome to our monthly trawl for developmental and stem cell biology (and related) preprints.

The preprints this month are hosted on bioRxiv – use these links below to get to the section you want:

Developmental biology

• Patterning & signalling
• Morphogenesis & mechanics
• Genes & genomes
• Stem cells, regeneration & disease modelling
• Plant development
• Environment, evolution and development

Cell Biology

Modelling

Tools & Resources

Developmental biology

| Patterning & signalling

Mac/Lac-tosylceramide regulates intestinal homeostasis and secretory cell fate commitment by facilitating Notch signaling

Kebei Tang, Xuewen Li, Jiulong Hu, Jingyuan Shi, Yumei Li, Yansu Chen, Chang Yin, Fengchao Wang, Rongwen Xi

Genetic evidence: zebrafish hoxba and hoxbb clusters are essential for the anterior-posterior positioning of pectoral fins

Morimichi Kikuchi, Renka Fujii, Daiki Kobayashi, Yuki Kawabe, Haruna Kanno, Sohju Toyama, Farah Tawakkal, Kazuya Yamada, Akinori Kawamura

Geometry-driven asymmetric cell divisions pattern cell cycles and zygotic genome activation in the zebrafish embryo

Nikhil Mishra, Yuting I. Li, Edouard Hannezo, Carl-Philipp Heisenberg

Insect wings arose with a genetic circuit that extends the useful range of a BMP morphogen

Anqi Huang, Luca Cocconi, Ben Nicholls-Mindlin, Cyrille Alexandre, Guillaume Salbreux, Jean-Paul Vincent

Divergent Hox cluster collinearity in horned beetles reveals adult head patterning function of labial

Erica M. Nadolski, Isabel G. Manley, Sukhmani Gill, Armin P. Moczek

Geometric, cell cycle and maternal-to-zygotic transition-associated YAP dynamics during preimplantation embryo development

Madeleine Chalifoux, Maria Avdeeva, Eszter Posfai

Measuring morphogen transport over multiple spatial scales in live zebrafish embryos

Ashwin V. S. Nelanuthala, Bitan Saha, Jagadish Sankaran, Tom J. Carney, Karuna Sampath, Thorsten Wohland

Anti-resonance in developmental signaling regulates cell fate decisions

Samuel J. Rosen, Olivier Witteveen, Naomi Baxter, Ryan S. Lach, Marianne Bauer, Maxwell Z. Wilson

CHD3 regulates BMP signalling response during cranial neural crest cell specification

Zoe H. Mitchell, Joery den Hoed, Willemijn Claassen, Martina Demurtas, Laura Deelen, Philippe M. Campeau, Karen Liu, Simon E. Fisher, Marco Trizzino

Shared Lineage, Distinct Outcomes: Yap and Taz Loss Differentially Impact Schwann and Olfactory Ensheathing Cell Development Without Disrupting GnRH-1 Migration

Ed Zandro M. Taroc, Enrico Amato Jr., Alexis Semon, Nikki Dolphin, Briane Beck, Sophie Belin, Yannick Poitelon, Paolo E. Forni

Bdnf-Ntrk2 Signaling Promotes but is not Essential for Spinal Cord Myelination in Larval Zebrafish

Kristen Russell, Christina A. Kearns, Macie B. Walker, Christopher S. Knoeckel, Angeles B. Ribera, Caleb A. Doll, Bruce Appel

| Morphogenesis & mechanics

Endoderm differentiates into a transient epidermis in the mouse perineum

Christine E. Larkins, Daniel M. Grunberg, Gabriel M. Daniels, Erik J. Feldtmann, Martin J. Cohn

Molecular insights into electroreceptor ribbon synapses from differential gene expression in sturgeon lateral line organs

Alexander S. Campbell, Martin Minařík, David Buckley, Tanmay Anand, David Gela, Martin Pšenička, Clare V. H. Baker

Myelination across cortical hierarchies and depths in humans and macaques

Monami Nishio, Xingyu Liu, Allyson P. Mackey, Michael J. Arcaro

Defects in nephrogenesis result in an expansion of the Foxd1+ stromal progenitor population

Michael G. Michalopulos, Yan Liu, Dinesh Ravindra Raju, John T. Lafin, Yanru Ma, Dhruv Gaur, Sadiksha Khadka, Chao Xing, Andrew P. McMahon, Thomas J. Carroll, Keri A. Drake

Analysis of molecular and cellular bases of honey bee mushroom body development

Shuichi Kamata, Takeo Kubo, Hiroki Kohno

Cross-Species Biomechanical Determinants of Shape Diversity

Richard Bailleul, Nicolas Cuny, Diana Khoromoskaia, Soham Basu, Giulia Bergamini, Paolo Cucurachi, Sebastian Rupp, Annika Guse, Camille Curantz, Natalie Swinhoe, Phillip Cleves, Jamie Craggs, Sosuke Fujita, Yu-ichiro Nakajima, Petrus J. Steenbergen, Alba Diz-Muñoz, Guillaume Salbreux, Aissam Ikmi

Testosterone exposure during fetal masculinization programming window determines the kidney size in adult mice

Arttu Junnila, Kalle T. Rytkönen, Guillermo Martinez-Nieto, Mats Perk, Hao Li, Jenni Airaksinen, Ida Hyötyläinen, Oliver Mehtovuori, Asta Laiho, Claes Ohlsson, Laura L. Elo, Satu Kuure, Matti Poutanen, Petra Sipilä

Mouse scalp development requires Rac1 and SRF for the maintenance of mechanosensing mesenchyme

Bharath H. Rathnakar, Alex Rackley, Hae Ryong Kwon, William L. Berry, Lorin E. Olson

A prevalent Krt8-to-Krt5 cellular state transition in skin is co-opted by p63 for enamel organ development

Qinghuang Tang, Jung-Mi Lee, Liwen Li, Chunmiao Cai, Hunmin Jung, Hyuk-Jae Edward Kwon

Development of the zebrafish anterior lateral line system is influenced by underlying cranial neural crest

Vishruth Venkataraman, Noel H. McGrory, Theresa J. Christiansen, Joaquin Navajas Acedo, Michael I. Coates, Victoria E. Prince

Additive effects on craniofacial development upon conditional ablation of PDGFRα and SHP2 in the mouse neural crest lineage

Daniel Fuhr, Jessica Johnston, Elliott P. Brooks, Katherine A. Fantauzzo

Keratins coordinate tissue spreading by balancing spreading forces with tissue material properties

Suyash Naik, Yann-Edwin Keta, Kornelija Pranjic-Ferscha, Édouard Hannezo, Silke Henkes, Carl-Philipp Heisenberg

mTOR regulates Wnt signaling to promote tension-mediated lens vesicle closure

Qian Wang, Hao Wu, Yingyu Mao, Alyssa Chow, Michael Bouaziz, Yihua Wu, Xin Zhang

A myofilament lattice model of Drosophila flight muscle sarcomeres based on multiscale morphometric analysis during development

Péter Görög, Tibor Novák, Tamás F. Polgár, Péter Bíró, Adél Gutheil, Csaba Kozma, Tamás Gajdos, Krisztina Tóth, Alexandra Tóth, Miklós Erdélyi, József Mihály, Szilárd Szikora

Altered pseudostratified epithelial development of the lateral ventricle choroid plexus in Mllt11 mutants

Sam Moore, Danielle Stanton-Turcotte, Angelo Iulianella

Noncanonical Wnt/Ror2 Signaling Regulates Basal Cell Fidelity and Branching Morphogenesis in the Mammary Gland

Hongjiang Si, Erika Mendoza Mendoza, Madelyn Esquivel, Chad J. Creighton, Jianming Xu, Kevin Roarty

| Genes & genomes

Active DNA demethylation is upstream of rod-photoreceptor fate determination and required for retinal development

Ismael Hernández-Núñez, Alaina Urman, Xiaodong Zhang, William Jacobs, Christy Hoffman, Sohini Rebba, Ellen G Harding, Qiang Li, Fengbiao Mao, Andi K Cani, Shiming Chen, Meelad M Dawlaty, Rajesh C Rao, Philip A Ruzycki, John R Edwards, Brian S Clark

Mismatch repair and homologous recombination are yin-yang partners in hybrid zygote meiosis

Chi-Ning Chuang, Ya-Ling Hung, Hong-Xiang Kim, Jhong-Syuan Yao, Hou-Cheng Liu, Sheng-Yuan Chen, Lavernchy Jovanska, Yi-Ping Hsueh, Ruey-Shyang Chen, Ting-Fang Wang

Spatially regulated mRNA decay sharpens expression patterns in the Drosophila embryo

Jennifer C. Love, Lauren Forbes Beadle, Catherine Sutcliffe, Magnus Rattray, Hilary L. Ashe

Differential Roles of Broadly Expressed Transcription Factors in Early Cardiac Cell Specification

Shiva Abbasi, Evangelia Chrysostomou, Georgios Tegousis, Oscar Villasana Espinosa, Rie Conley, Theodora Koromila

MYRF is Essential in Mesothelial Cells to Promote Lung Development and Maturation

Gidsela Luna, Jamie Verheyden, Chunting Tan, Estelle Kim, Michelle Hwa, Jugraj Sahi, Yufeng Shen, Wendy Chung, David McCulley, Xin Sun

Feed-forward loops by NR5A2 ensure robust gene activation during pre-implantation development

Wataru Kobayashi, Siwat Ruangroengkulrith, Eda Nur Arslantas, Adarsh Mohanan, Kikue Tachibana

The mex-3 3’ untranslated region is essential for reproduction during temperature stress

Hannah E. Brown, Haik V. Varderesian, Sara A. Keane, Sean P. Ryder

Dora, a key component of target-directed miRNA degradation, is essential for local genomic amplification in Drosophila ovarian follicle cells

Natalia Akulenko, Oxana Olenkina, Elena Mikhaleva, Sofya Marfina, Anastasia Krylova, Stepan Toshchakov, Sergei Ryazansky

Single-Cell Roadmap of Early Hemato-Endothelial Development: Functions of Atf3, Zfp711 and Bcl6b

Ridvan Cetin, Giulia Picco, Jente van Staalduinen, Eric Bindels, Remco Hoogenboezem, Gregory van Beek, Mathijs A Sanders, Yaren Fidan, Ahmet Korkmaz, Joost Gribnau, Jeffrey van Haren, Danny Huylebroeck, Eskeatnaf Mulugeta, Frank Grosveld

Single-nucleus multiomics of murine gonadal cells reveals transcriptional regulatory network underlying supporting lineage differentiation

Yu-Ying Chen, Karina Rodriguez, Adriana K. Alexander, Xin Xu, Brian Papas, Martin A. Estermann, Humphrey Hung-Chang Yao

Lysine-specific demethylase 1a is obligatory for gene regulation during kidney development

Savithri Balasubramanian Kota, Satya K. Kota

| Stem cells, regeneration & disease modelling

Dependence of cell fate potential and cadherin switching on primitive streak coordinate during differentiation of human pluripotent stem cells

Ye Zhu, Aryeh Warmflash

A kinetics-based model of hematopoiesis reveals extrinsic regulation of skewed lineage output from stem cells

Esther Rodríguez-Correa, Florian Grünschläger, Tamar Nizharadze, Natasha Anstee, Jude Al-Sabah, Vojtech Kumpost, Anastasia Sedlmeier, Congxin Li, Melanie Ball, Foteini Fotopoulou, Jeyan Jayarajan, Ian Ghezzi, Julia Knoch, Megan Druce, Theo Aurich, Marleen Büchler-Schäff, Susanne Lux, Pablo Hernández-Malmierca, Julius Gräsel, Dominik Vonficht, Anna Mathioudaki, Judith Zaugg, Ralf Mikut, Andreas Trumpp, Thomas Höfer, Daniel Hübschmann, Simon Haas, Michael D. Milsom

Chronic alcohol consumption enhances the differentiation capacity of hematopoietic stem and progenitor cells into osteoclast precursors

Hami Hemati, Madison B. Blanton, Jude koura, Rupak Khadka, Kathleen A. Grant, Ilhem Messaoud

Dimethyl sulfoxide primes induced pluripotent stem cells for more efficient nephron progenitor and kidney organoid differentiation

Helen Kearney, Aleksandra Rak-Raszewska, Adrián Seijas-Gamardo, Enrique Escarda-Castro, Paul Wieringa, Lorenzo Moroni, Carlos Mota

Quiescence modulates age-related changes in the functional capacity of highly proliferative canine lung mesenchymal stromal cell populations

Nakesha Agyapong, Leslie Dominguez-Ortega, Brian Macdonough, Patrick Mulluso, Sagar Patel, Briti Prajapati, Brian Saville, Andrew Shapiro, Ethan Trim, Kara Battaglia, Jocelyn Herrera, Gianna Garifo-MacPartland, Dianne Newcombe, Latoya Okundaye, Heather Paglia, Julia Paxson

Senolytics restore hematopoietic stem cell function in sickle cell disease

Aditya Barve, Adam Cornwell, Pramika Sriram, Alex Kopyov, Preeti Dabas, Emilia Kooienga, Zakiya Kelley, James Johnson, Jacquelyn A. Myers, Esther A. Obeng, Guolian Kang, Yunus Olufadi, Terri Cain, Lindsay Talbot, David Spence, Mauricio Cortes, Sam Miller, Dirk Loeffler, Akshay Sharma, Shannon McKinney-Freeman

Human pluripotent stem cell-derived intestinal epithelial cells maintain small intestine-specific functions over time, even with repeated cell division

Junlong Chen, So Kuramochi, Shinichiro Horiuchi, Tomoyuki Kawasaki, Hiroto Kakizaki, Lirika Tabata, Tohru Kimura, Kazuaki Nakamura, Hidenori Akutsu, Seiichi Ishida, Akihiro Umezawa

Canonical Hedgehog Signaling Controls Astral Microtubules and Mitotic Spindle Orientation in Neural Progenitors and iPSCs

Fengming Liu, Anna Medyukhina, Kris M Olesen, Abbas Shirinifard, Hongjian Jin, Lei Li, Marina Mapelli, Khaled Khairy, Young-Goo Han

YY1 protein is essential for the promotion of Muller glia reprogramming and retina regeneration

Mansi Chaudhary, Omkar Mahadeo Desai, Poonam Sharma, Sharanya Premraj, Pooja Shukla, Rajesh Ramachandran

Analysis of The Senescence Secretome During Zebrafish Retina Regeneration

Gregory J. Konar, Kyle T. Vallone, Tu D. Nguyen, James G. Patton

Platelet endocytosis and α-granule cargo packaging are essential for normal skin wound healing

Daniëlle M. Coenen, Hammodah R. Alfar, Sidney W. Whiteheart

Cooperation between proximate cell layers drives large-scale wound closure prior to whole-body regeneration

Allison P. Kann, Mansi Srivastava

Ectopic head regeneration after nervous system ablation in a sea anemone

Fatemeh Mazloumi Gavgani, Johanna E.M. Kraus, Joshua November, Layla Al-Shaer, Anna Cosima Seybold, Benjamin Lerstad, Harald Hausen, Michael J. Layden, Fabian Rentzsch

Divergent stem cell mechanisms governing the primary body axis and appendage regeneration in the axolotl

Liqun Wang, Li Song, Chao Yi, Jing Zhou, Zhouying Yong, Yan Hu, Xiangyu Pan, Na Qiao, Hao Cai, Wandong Zhao, Rui Zhang, Lieke Yang, Lei Liu, Guangdun Peng, Elly M Tanaka, Hanbo Li, Yanmei Liu, Ji-Feng Fei

Specific cell states underlie complex tissue regeneration in spiny mice

Emilio Oviedo Rivadeneira, Robyn Allen, Mike Adam, Ashley W. Seifert

A Single Mutation in TRPC6 Protects Mice from Acute Lung Injury by Regenerating Endothelium

Mumtaz Anwar, Vijay Avin Balaji Raghunathrao, Ruhul Amin, Vigneshwaran Vellingiri, Jagdish Chandra Joshi, Md Zahid Akhter, Mohammad Tauseef, Ibrahim Hassan El-Erian, Nazanin Khaki, Ibra S. Fancher, Hazem Abdelkarim, Irena Levitan, Konstantinos Chronis, Vadim Gaponenko, Dolly Mehta

Cloche/Npas4l is a pro-regenerative platelet factor during zebrafish heart regeneration

Junjie Hou, Yabing Song, Chenglu Xiao, Yuanyuan Sun, Jie Shen, Xiaokai Ma, Qinchao Zhou, Shih-Ching Chiu, Yang Xu, Yanyi Huang, Ye-Guang Chen, Xiaojun Zhu, Jianbin Wang, Jing-Wei Xiong

ZEB2 signaling is essential for ureteral smooth muscle cell differentiation and maintenance

Sudhir Kumar, Xueping Fan, Harshita Pattam, Kun Yan, Easton Jinhun Liaw, Jiayi Ji, Emily Zaltz, Paul Song, Yuqiao Jiang, Yuriko Nishizaki, Yujiro Higashi, Chen-Leng Cai, Weining Lu

Intersecting impact of CAG repeat and Huntingtin knockout in stem cell-derived cortical neurons

Jennifer T. Stocksdale, Matthew J. Leventhal, Stephanie Lam, Yu-Xin Xu, Yang Oliver Wang, Keona Q. Wang, Reuben Tomas, Zohreh Faghihmonzavi, Yogi Raghav, Charlene Smith, Jie Wu, Ricardo Miramontes, Kanchan Sarda, Heather Johnson, Min-Gyoung Shin, Terry Huang, Mikelle Foster, Mariya Barch, Naufa Armani, Chris Paiz, Lindsay Easter, Erse Duderstadt, Vineet Vaibhav, Niveda Sundararaman, Dan P. Felsenfeld, Thomas F. Vogt, Jennifer Van Eyk, Steve Finkbeiner, Julia A. Kaye, Ernest Fraenkel, Leslie M. Thompson

A cell-type specific surveillance complex represses cryptic promoters during differentiation in an adult stem cell lineage

Neuza R. Matias, Lorenzo Gallicchio, Dan Lu, Jongmin J. Kim, Julian Perez, Angela M. Detweiler, Chenggang Lu, Benjamin Bolival, Margaret T. Fuller

An increase in reactive oxygen species underlies neonatal cerebellum repair

Anna Pakula, Salsabiel El Nagar, N. Sumru Bayin, Jens Bager Christensen, Daniel N. Stephen, Adam James Reid, Richard Koche, Alexandra L. Joyner

Hematopoietic stem cells undergo bidirectional fate transitions in vivo

Tsuyoshi Fukushima, Trine Ahn Kristiansen, Lai Ping Wong, Samuel Keyes, Yosuke Tanaka, Michael Mazzola, Ting Zhao, Lingli He, Masaki Yagi, Konrad Hochedlinger, Satoshi Yamazaki, Ruslan I. Sadreyev, David T Scadden

Muscle stem cell activation in response to acute injury is promoted by transient exposure to neutrophil elastase

Christopher J. Clarke, Amy Stonadge, Ethan Aminov, Addolorata Pisconti

| Plant development

Regulation of early-stage tomato fruit growth by the splicing factor RS2Z36

Stavros Vraggalas, Remus RE Rosenkranz, Mario Keller, Yolanda Pérez-Pérez, Samia Bachiri, Kerstin J Zehl, Jessica Bold, Stefan Simm, Arindam Ghatak, Wolfram Weckwerth, Leila Afjehi-Sadat, Palak Chaturvedi, Pilar S Testillano, Michaela Müller-McNicoll, Kathi Zarnack, Sotirios Fragkostefanakis

Multiple fertility restorer loci for cytoplasmic male sterility caused by orf137 in tomato

Yurie Iki, Issei Harada, Kentaro Ezura, Seira Mashita, Kosuke Kuwabara, Hitomi Takei, Atsushi Toyoda, Kenta Shirasawa, Tohru Ariizumi

Shoot at Site: Advancing in planta transformation, regeneration and gene-editing through a cascade of wounding-mediated developmental regulators

Arjun Ojha Kshetry, Kaushik Ghose, Anshu Alok, Vikas Devkar, Vidhyavathi Raman, Robert M. Stupar, Luis Herrera-Estrella, Feng Zhang, Gunvant B. Patil

Transcriptomic insights into the role of miR394 in the regulation of flowering time in Arabidopsis thaliana

Federico Belen, Yanel Bernardi, Andrea Reutemann, Abelardo Vegetti, Marcela Dotto

Protein and genetic interactions between RACK1A and FSD1 modulate plant development and stress granule-dependent response to salt in Arabidopsis

Pavol Melicher, Petr Dvořák, Maryna Tsinyk, Jan Řehák, Olga Šamajová, Kateřina Hlaváčková, Miroslav Ovečka, Jozef Šamaj, Tomáš Takáč

The ribosomal protein RPS6A modulates auxin signalling and root development in Arabidopsis

Kai Pan, Kai Hou, Mengjuan Kong, Shutang Tan

Spatial and single-cell expression analyses reveal complex expression domains in early wheat spike development

Xiaosa Xu, Huiqiong Lin, Junli Zhang, German Burguener, Francine Paraiso, Connor Tumelty, Chengxia Li, Yuchen Liu, Jorge Dubcovsky

| Environment, evolution and development

Physical disturbance induces heart stop in mangrove killifish, Kryptolebias marmoratus embryos

Rosalie Herbert, Alexander David Corbett, Tetsuhiro Kudoh

Evolution of developmental bias explains divergent patterns of phenotypic evolution

Joao Picao-Osorio, Charlotte Bouleau, Pablo M. Gonzalez de la Rosa, Lewis Stevens, Nina Fekonja, Mark Blaxter, Christian Braendle, Marie-Anne Félix

Comparative genomics of sex determination related genes reveals shared evolutionary patterns between bivalves and mammals, but not Drosophila

Filippo Nicolini, Sergey Nuzhdin, Fabrizio Ghiselli, Andrea Luchetti, Liliana Milani

Genetic parallels in biomineralization of the calcareous sponge Sycon ciliatum and stony corals

Oliver Voigt, Magdalena V. Wilde, Thomas Fröhlich, Benedetta Fradusco, Sergio Vargas, Gert Wörheide

NSAID-mediated cyclooxygenase inhibition disrupts ectodermal derivative formation in axolotl embryos

Emma J. Marshall, Raneesh Ramarapu, Tess A. Leathers, Nikolas Morrison-Welch, Kathryn Sandberg, Maxim Kawashima, Crystal D. Rogers

Tooth development in frogs: Implications for the re-evolution of lost mandibular teeth and the origin of a morphological innovation

Daniel J Paluh, Madeline Brinkman, Kyliah Gilliam-Beale, Daniela Salcedo-Recio, Jacob Szafranski, James Hanken, Gareth J Fraser

Shaping of developmental gradients through selection on multiple loci in Antirrhinum

Desmond Bradley, Louis Boell, Daniel Richardson, Lucy Copsey, Annabel Whibley, Ting Xu, Yue Zhang, Yongbiao Xue, David Field, Enrico Coen

Antero-posterior patterning in the brittle star Amphipholis squamata and the evolution of body plans across echinoderms

L. Formery, P. Peluso, D. R. Rank, D. S. Rokhsar, C. J. Lowe

Parallel adaptation to geothermally-warmed habitats due to common structural variation and functional developmental pathways

Matthew K. Brachmann, Ana P. B. Costa, Shaun Robertson, Kate Donoghue, Natalie Pilakouta, Mark Whitehead, Xuan Liu, Bjarni Kristjansson, Skuli Skulason, Colin Selman, Kevin Parsons

Perinatal Nicotine Exposure Disrupts Hematopoietic Stem Cell Development and Elevates Influenza Susceptibility in Adulthood

T Cool, A Rodriguez y Baena, MGE Rommel, C Mattingly, E Bachinsky, S Saini, S Chattopadhyaya, BA Manso, S Rajendiran, AK Worthington, DM Poscablo, A Deguzman, T Berger-Cahn, DF Boyd, EC Forsberg

Enteric neural crest development in Astyanax mexicanus surface fish and cavefish

Pavani Ponnimbaduge Perera, Kaitlyn Webster, Misty R Riddle

Six million years of vole dental evolution driven by tooth development

Fabien Lafuma, Élodie Renvoisé, Julien Clavel, Ian J. Corfe, Gilles Escarguel

Cell Biology

Dysregulation of cell migration by matrix metalloproteinases in geleophysic dysplasia

Alejo A. Morales, Vladimir Camarena, LéShon Peart, Sarah Smithson, Lindsay Shaw, Lucy Webber, Jose M. Negron, Juan E. Sola, Ann-Christina Brady, Katherina Walz, Gaofeng Wang, Mustafa Tekin

Mitophagy at the oocyte-to-zygote transition promotes species immortality

Siddharthan Balachandar Thendral, Sasha Bacot, Katherine S. Morton, Qiuyi Chi, Isabel W. Kenny-Ganzert, Joel N. Meyer, David R. Sherwood

Treatment of human oocytes with extracellular vesicles from follicular fluid during rescue in vitro maturation enhances maturation rates and modulates oocyte proteome and ultrastructure

Sofia Makieva, Mara D. Saenz-de-Juano, Carmen Almiñana, Stefan Bauersachs, Sandra Bernal-Ulloa, Min Xie, Ana G. Velasco, Natalia Cervantes, Maike Sachs, Susanne E. Ulbrich, Brigitte Leeners

Polarity reversal of stable microtubules during neuronal development

Malina K. Iwanski, Albert K. Serweta, H. Noor Verwei, Bronte C. Donders, Lukas C. Kapitein

Super-resolution compatible DNA labeling technique reveals chromatin mobility and organization changes during differentiation

Maruthi K. Pabba, Miroslav Kuba, Tomáš Kraus, Kerem Celikay, Janis Meyer, Sunik Kumar Pradhan, Andreas Maiser, Hartmann Harz, Heinrich Leonhardt, Karl Rohr, Michal Hocek, M. Cristina Cardoso

Drosophila embryo cellularization is modulated by the viscoelastic dynamics of cortical-membrane interactions

Kyle Stark, Mayte Bonilla Quintana, Anna Marie Sokac, Padmini Rangamani

Drosophila larval gut transcriptome reveals a microbe-mediated intestinal tissue growth via Ecdysone during adaptive growth

Longwei Bai, Stéphanie Bellemin, Coralie Drelon, Pauline Joncour, Elodie Guillemot, Maura Strigini, Benjamin Gillet, François Leulier, Cathy Isaura Ramos

Remodeling of extracellular matrix collagen IV by MIG-6/papilin regulates neuronal architecture

Malika Nadour, Robert I. Valette Reveno Leatis, Marie Biard, Noémie Frébault, Lise Rivollet, Philippe St-Louis, Cassandra R. Blanchette, Andrea Thackeray, Paola Perrat, Carlo Bevilacqua, Robert Prevedel, Laurent Cappadocia, Georgia Rapti, Maria Doitsidou, Claire Y. Bénard

Prolonged metaphase II arrest weakens Aurora B/C- dependent error correction in mouse oocytes

Antoine Langeoire, Alison Kem-Seng, Damien Cladière, Katja Wassmann, Eulalie Buffin

Mammalian oocytes receive maternal-effect RNAs from granulosa cells

Caroline A. Doherty, Abdulfatai Tijjani, Steven C. Munger, Diana J. Laird

Molecular organization of the distal tip of vertebrate motile cilia

Juyeon Hong, Chanjae Lee, Ophelia Papoulas, Jiehong Pan, Maki Takagishi, Nadia Manzi, Daniel Dickinson, Amjad Horani, Steven Brody, Edward Marcotte, Tae Joo Park, John B Wallingford

Cell-penetrating peptide-mediated mouse oocyte activation

Toru Suzuki

Rapid pronucleus assembly using cytoplasmic RNAs in fertilized eggs of Xenopus laevis

Mizuki Ikeda, Yuto Tanaka, Tatsuya Shohoji, Yuki Hara

A Critical Role for the Fascin Family of Actin Bundling Proteins in Axon Development, Brain Wiring and Function

Katherine R. Hardin, Arjolyn B. Penas, Shuristeen Joubert, Changtian Ye, Kenneth R. Myers, James Q. Zheng

Dysregulation of the actin cytoskeleton and FMRP causes polar body protrusion defects in human fragile X premutation and aged oocytes

Kelly McCarter, Madhura Deshpande, Phillip Romanski, Christina Anna Stratopoulou, Nikica Zaninovic, Momina Tareen, Razan Al-Mousawi, Daylon James, Advaitha Madireddy, Zev Rosenwaks, Jeannine Gerhardt

NOR1 and Mitophagy: An Insight into Sertoli Cell Function Regulating Spermatogenesis

Bhola Shankar Pradhan, Deepyaman Das, Hironmoy Sarkar, Indrashis Bhattacharya, Subeer S Majumdar

In toto imaging of germ plasm dynamics reveals an essential role for early distribution of germ granules in germline development

Andreas Zaucker, Maria Papafoti, David Corcoran, DaeNia La Shawn La Rodé, Rebecca Leech, Pavle Vrliczak, Pooja Kumari, Karuna Sampath

Modelling

Predicting organoid morphology through a phase field model: insights into cell division and lumenal pressure

Sakurako Tanida, Kana Fuji, Linjie Lu, Tristan Guyomar, Byung Ho Lee, Alf Honigmann, Anne Grapin-Botton, Daniel Riveline, Tetsuya Hiraiwa, Makiko Nonomura, Masaki Sano

Modeling Epithelial Morphogenesis and Cell Rearrangement during Zebrafish Epiboly: Tissue Deformation, Cell-Cell Coupling, and the Mechanical Response to Stress

Sharon B. Minsuk, T. J. Sego, David M. Umulis, Mary C. Mullins, James A. Glazier

Generative model for the first cell fate bifurcation in mammalian development

Maria Avdeeva, Madeleine Chalifoux, Bradley Joyce, Stanislav Y. Shvartsman, Eszter Posfai

Mathematical modelling predicts novel mechanisms of stream confinement from Trail/Colec12/Dan in the collective migration of cranial neural crest cells

Samuel W.S. Johnson, Paul M. Kulesa, Ruth E. Baker, Philip K. Maini

Learning a mechanical growth model of flower morphogenesis

Argyris Zardilis, Alexandra Budnikova, Henrik Jönsson

Tools & Resources

CellFateExplorer: An integrated platform for exploring cell fate

Zhaoyang Huang, Haonan Ma, Yuchuan Peng, Chenguang Zhao, Liang Yu

Deep learning predicts tissue outcomes in retinal organoids

Cassian Afting, Norin Bhatti, Christina Schlagheck, Encarnación Sánchez Salvador, Laura Herrera-Astorga, Rashi Agarwal, Risa Suzuki, Nicolaj Hackert, Hanns-Martin Lorenz, Lucie Zilova, Joachim Wittbrodt, Tarik Exner

Inducible, virus-free direct lineage reprogramming enhances scalable generation of human inner ear hair cell-like cells

Robert N. Rainey, Sam D. Houman, Louise Menendez, Ryan Chang, Litao Tao, Helena Bugacov, Andrew P. McMahon, Radha Kalluri, John S. Oghalai, Andrew K. Groves, Neil Segil

pholidosis: an R package to compare biological surface patterns

Isaac W Krone

Temperature-dependence of Early Development of Zebrafish and the Consequences for Laboratory Use and Animal Welfare

Angelina Miller, Katja Lisa Schröder, Karsten Eike Braun, Caitlin Steindorf, Richard Ottermanns, Martina Roß-Nickoll, Henner Hollert, Thomas Backhaus

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