Avian Model Systems 7: Nagoya Chick Meeting

Posted by on February 21st, 2012

 


 

After the devastating earthquake last year forced us to cancel the chick meeting, we are happy to announce that the next chick meeting will be held in Nagoya, Japan. The meeting will be held from 14th to 18th November 2012.


Please check the website for further details.

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Dates for your calendar

Posted by on February 20th, 2012

My inbox is full of abstract submission deadline reminders and meeting registration announcements, so I thought I’d share a few. Which conferences are you planning to go to this year?

 


Abstract submission deadlines:

* February 21 (tomorrow!) - Abstract submission deadline for the JSDB/JSCB meeting (May 28-31, Kobe)
* March 2 - Abstract submission deadline for the BSDB/BSCB/JSDB meeting (April 15-18, Warwick)
* March 26 - Abstract submission deadline for the SDB Meeting (July 19-23, Montreal)

 

Registration open:
* The International Conference on Zebrafish Development and Genetics (June 20-24, Madison, Wisconsin) just opened abstract submission. Get yours in by March 27. Meeting registration starts later this week.
* The Santa Cruz Developmental Biology Meeting (August 8-11, Santa Cruz) launched their website and Facebook page. Abstract submission and registration will open later this Spring.

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Stem cells on the Slovenian slopes

Posted by on February 6th, 2012

A couple of weeks ago, around 70 stem cell scientists gathered in the beautiful ski resort of Kranjska Gora, Slovenia, for the sixth meeting organised by the European Stem Cell consortium EuroSyStem. Although the snow wasn’t up to much (as the photo proves – just take a look at the opposite side of the valley!), the lack of fresh powder left more time for the science. And there was a lot of great science to be discussed…

Hans Clevers (Hubrecht Institute) kicked things off in the first of two outstanding plenary talks, with the latest developments on intestinal stem cell homeostasis, including beautiful demonstrations of how two innovative technologies – in vitro organoid culture, and the “Brainbow” cell labelling technique – have provided insights into the life of the Lgr5+ crypt stem cell. The name of Charles Leblond came up often in his talk: neither I nor many in the audience had ever heard of him, but his insights into stem cell self renewal, as well as his development of autoradiography, definitely earn him a place in the stem cell Hall of Fame (see here for a summary of his achievements).

The following day took us on a whistle-stop tour of model organisms, with planaria, flies, zebrafish, salamanders and Arabidopsis all taking their turn in the spotlight. After that, mammals took centre stage, with talks covering the whole spectrum of the stem cell field, from lineage determination and ES cell reprogramming, to aging and cancer. Prize for “Unsettling Animal Photo of the Week” (with apologies to the Guardian newspaper for blatant plagiarism of their feature) goes to Tom Rando (Stanford), whose lab has provided striking insights into systemic effects of aging from heterochronic parabiosis experiments – essentially grafting two mice together. Take home message: if you need a blood transfusion, you really want a young person’s blood! Other highlights included a lively debate on the Immortal Strand hypothesis following talks from Shahragim Tajbakhsh (Institut Pasteur) and Peter Lansdorp (Terry Fox Laboratory), and a detour into the molecular mechanisms regulating autophagy from Paul Coffer (University Medical Centre Utrecht).

Finally, the scientific program ended with an impressive demonstration of what money and technical resources can achieve, when coupled with hard work and – most importantly – a sharp nose for sniffing out an interesting story. The second plenary speaker, Huck Hui Ng (Genome Institute of Singapore), presented a tour-de-force analysis of the transcriptional and post-transcriptional networks underlying reprogramming, self-renewal and differentiation.

But the real talking point of the meeting came on the Wednesday evening, when we were fortunate enough to be joined by Arnd Hoeveler from the European Commission, who came to talk about future funding from the EC for stem cell research. While the direction the EC’s framework program is taking – towards funding mainly translational research – may not have gone down universally well with the audience of mostly basic researchers, we were given a fantastic forum to discuss science funding and politics with someone who clearly cares deeply about advancing science in Europe, and who faces a tough challenge to convince the political elite of the importance of the kind of research that this meeting was all about.

I’ve only had the chance to mention a few of the great talks, but all in all this was a fantastic conference, seamlessly organised by the EuroSyStem team. So thanks to them, the speakers and the rest of the participants for putting on an eye-opening and stimulating meeting. Now, if only they could have arranged for better piste conditions, it would have been just perfect!
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A wave from Quintay

Posted by on January 31st, 2012

The International course on Developmental Biology was a great experience, both instructive and mind-opening. All the students were shuttled to the remote and very small fishing village of Quintay, where the CIMARQ, the investigation centre where the course took place, is located. Originally a whaling station, this centre is dedicated to the instruction of professionals in the area of marine resources and has various branches of research mainly based in repopulation strategies of different species ranging from Sea Urchins to the delicious Conger eel or Sole fish. Their main objective is to provide small scale fish-farming to the general community. In fact, on the day of our arrival, after a Lecture on the history of and the main, original questions in Development by Dr. Roberto Mayor, we were given a short practical on Sea Urchin gamete harvesting and fertilization. This was followed by a very instructive tour of CIMARQ and its various projects, from seaweed culture (which is the main source of food for Sea Urchins) to the Conger and Cole fish tanks (see below). This course was unique in that it covered a wide range of developmental models instead of focusing on one or two: Throughout the twelve days of the course we had two days of each: Zebrafish, Xenopus, Planarian, Drosophila and Chick (plus a symposium and a first day tour). While including such a variety of different models may seem too optimistic (especially for just two days of each!), the truth is that the course was a huge success as proved by the fact that most of the experiments were successful. Our day schedule started with lectures and lab work in the morning. Then lunch, after which we spent most of the time in the lab and, after dinner, everyone attended presentations, by students, about their research. This part (the presentations) was a very good innovation this year and, given its success, it will probably continue in future courses. The discussions were very productive, and, from a student’s point of view, it was great having peak scientists listening, criticizing and suggesting experiments for my research. It was also good to share our areas of research between students since it was very different from the casual exchange of area of research in informal gossip. So, on to the course.

Zebrafish module

Zebrafish was coordinated by Dr. Kate Whitlock. The first Lecture was on Zebrafish basics (rearing and genetics) and embryo morphology. We then proceeded to the lab in which work consisted of cataloging the effects of different concentrations of alcohol in zebrafish development by observation under dissecting microscope of live embryo general morphology and craniofacial development. Afterwards, we carried out an immunohistochemistry protocol for the detection of neuron and neural crest markers so as to further characterize the effects of ethanol in early development. To sum up the results, I would say that the message ¨Vertebrate development and alcohol don’t mix¨ was extremely clear: The deleterious effects on general and craniofacial development were patent even without the need for immunohistochemistry. The second lecture by Kate focused on neural crest development and how neural crest cells migrate and interact with the neural tube and placodes to give origin to the olfactory system At the lab, we studied gene expression of three main neuron and neural-crest marker genes (shh, sox10 and six4b) using in-situ hybridization. Finally, we observed fluorescent-tagged transgenic lines and we compared the results with those of immunohistochemistry and hybridization.

Xenopus module

Xenopus was the next chapter in this course and, again, experiments were very successful (albeit with a lot of effort). We began with a lecture from Dr. John Gurdon on the history of Xenopus as a Development model and classic experiments followed by a focus on the regulation of induction by molecule gradients. In the lab, we tried some of those same experiments ourselves: After a brief introduction by Roberto Mayor on egg collection and fertilization, we injected GFP mRNA into two, four and eight cell embryos. The next step was to create Nieuwkoop recombinants by separating vegetable and animal poles from different embryos and then setting them one against the other so that the vegetable pole would induce growth and mesoderm tissue in the animal pole. The following task was to graft neural crest tissue from GFP labeled neurulas into normal ones. Although it took some practice, after a few hours we successfully observed neural crest cells migrating under the ectoderm. On the second day, Roberto took the stand for a lecture on the post-fertilization phenomena of the Xenopus embryo and on the development and function of the neural crest. The final (and most challenging) experiment was to perform a Spemann organizer graft. After about five or ten minutes of dissection, John Gurdon displayed, with a proud smile, a clean and very neat graft. Although John definitely made it look easy, I had like four or five embryos which attest to the contrary. This was the price of success however as, although most of us agreed that it was harder than it looked, we managed to come up with several grafts which, at least, looked quite tidy. Due to a power shortage (and consequent rise in temperature of the incubator) we were unable to photograph many of those embryos, but the truth is that we were all very satisfied with our achievements.

Planarian module

Planarian was an interesting module in that it is a relatively new model and that we didn’t focus on embryogenesis but on regeneration instead (although we did have a very interesting lecture on planarian embryogenesis, which involves very rare and interesting processes). Planarians have unparalleled regeneration capacities and can regenerate a whole organism from a very small portion of the parent planarian. Dr. Alejandro Sánchez Alvarado was the scientist who established planarians as research models and it was great having him! Alejandro’s lecture on the establishment of planarians as regeneration research models and the similarities and differences between regeneration and embryogenesis was astounding. In the lab, we started out by cutting up worms in as many ways as we could think of. Over the following days, we got to see strange or downright weird forms of planarians as they regenerated the parts we had cut off. A second experimental part of this module consisted of dissociating cells, staining with Hoechst and observing  the cellular morphology of neoblasts (stem cells) among other cell types. In the third part we observed the differences in target proteins and tissue-specific markers between worms under normal conditions and worms either treated with RNAi or cut in half. I particularly enjoyed taking photos of these last worms showing the progressive regeneration of these systems and comparing the velocity and sequence of events that lead to the new worms. This was one of my favorite modules since I didn’t practically know anything about planarians past what I studied in an early zoology course (which seemed boring at the time) and, now, I can’t read enough about them!

Drosophila module

This module was taught by Drs Trudi Schüpbach, Eric Wieschaus and John Ewer. The first lecture, by Eric Wieschaus, was an interactive talk about fly genetics and fly crossing. We discussed the screen with which he identified genes that regulated embryogenesis. This was incredible and very instructive, because most of the time, we read about results without taking into account the real work that had to be done to obtain them. In the lab, we carried out several observational experiments: We were given embryos from unknown crosses and had to hypothesize what the parents´ phenotypes were by peeling embryos or bleaching them, followed by immersion in halocarbon oil or fixing in hoyers mountant. Another part of the practical consisted of analyzing mRNA expression (or localization) and observing embryo morphology and movement using transgenic lines. With the help of Trudi Schüpbach, we  also dissected ovaries and looked at oogenesis in transgenic lines with either GFP-tagged histones or a membrane-bound GFP. The second day, lead mainly by John Ewer, we focused on later stages of development. John gave a lecture about larval growth, physiology and metamorphosis concentrating on the reorganizing of the neural system during the pupal stage. In the lab we learned how to locate and remove imaginal discs from 3rd instar larvae and we watched the retraction and regrowth of sensory neuron axonal arbors and dendrites during the pupal stage Worthy of mention was Eric’s incredible enthusiasm with experiments and his loud cheering when the results were revealed (captured in photo). For me, all of the faculty of the course were extremely good professors: Their lectures were very clear and they were all very open to questions or doubts and were very watchful and helpful in the lab. Eric, however, was something else. I can’t actually explain how or why, but, as an example, he took it upon himself to single handedly sharpen most of our pincers to ease embryo peeling and larval dissection!

Chick module

The chick embryo was the last model and one of the most challenging, not only because of the complexity of dissection and grafting, but also because of how tired we were. After learning how to set up New cultures, we performed two experiments: Node grafts and cutting embryos in half. The first experiment, which is analogous to the one done in Xenopus, was intended to demonstrate how Hensen’s Node induces other tissues. In the second experiment we separated posterior and anterior halves of the embryo and observed their development, since the cells of each half reorganized and redefined the embryo axis. As professor Claudia Linker pointed out, in both of these experiments we had an impressive success rate (>90%), something most of us were very proud of! Additionally, we learned two other very useful techniques which were applied on embryos that were not removed from the egg: Embryo injection with either DNA or a fluorescent label and electroporation of the DNA-injected embryos. Although the success rate was lower, we did get to see some embryos with pretty neat dye labels and even a few good electroporations. Claudio Stern gave two more lectures on the molecular regulation and timing of neural specification and induction and a very interesting and comprehensive one integrating molecular and cellular processes that control, occur during and give rise to gastrulation.

Summing up…

As a student, I was extremely grateful to have had the opportunity to participate in this course. All the faculty were extremely helpful, friendly and sympathetic. In my experience, the closest I can get to scientists of the stature as the faculty of this course is by asking questions at lectures (if I’m extremely lucky). Sharing at least two days with them was very productive and actually giving them) a short presentation was incredible! I was given very good advice on how to guide my research and I also had some very interesting questions (the sort of that great minds usually ask)! Apart from the advantages/tricks/advice I learned for the model I currently work with, this course was very mind-opening: I learned about models that I practically had never heard of before and I feel comfortable about working, for example, with Zebrafish , Xenopus or Chick, three models I never though I would do experiments with! I’m currently thinking about how I can relate my research to one of these models and, hopefully, get my hands dirty working a few months in a lab which uses such models. I would strongly recommend this course for anyone with a strong curiosity and willing to take a look ¨outside the box¨. Please contact me at gersabio@gmail.com if you have any particular doubts about the course or this article and this is the course website: http://biodesarrollo.unab.cl/I wanted to shout out a special thanks for the three organizers: Alfredo Molina, Ariel Reyes and Roberto Mayor, without whom this course would not have occurred, for their dedication and very good will.


Germán Sabio
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Emergence and evolution of developmental patterns; APPLICATION DEADLINE EXTENDED TO 29 JAN 2012

Posted by on January 25th, 2012

Conference page: http://www.cnrs.fr/insb/cjm/2012/Vincent_e.html
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Science Online North Carolina

Posted by on January 19th, 2012

If you’re interested in the role of the internet in science and science communication, you should keep an eye on Twitter from today until Saturday. Specifically, the tag #scio12, which is being used by the annual Science Online conference in North Carolina.  (Here’s the link to see the newest tweets tagged #scio12, but I’ve also collected a few interesting ones in the Storify shown at the end of this post.)

I’m not attending this year, but I’ve been a few times before. The meeting is very broad, covering scientific publishing, data sharing, blogging, science journalism, science art and everything in between. The thing that sets it apart most from many scientific conferences is that many of the participants know each other very well, personally, but have never met. The meeting originated as “science blogging” conference, and brought together people who had been talking to each other online for months or years. As a result, in between serious discussions titled “Self-censorship in physician writers” or “Using altmetrics to track the online impact of your research” the schedule leaves room for social events, and participants have been planning podcasts and chocolate swaps for months. For many people, this conference is the event of the year, where they get to see old friends again. For others, it’s a place to promote their latest science book, to introduce their new software for scientists, to recruit science communicators, or simply to take a step back from their research and look at science from a new angle.

The several hundred tickets for the conference sold out within minutes, so there’s a good chance that, like me, you’re not there. I’ll do my best to follow the meeting over Twitter the next few days, and collect the most interesting things in the Storify below. Join me in following along with Science Online online!

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10th International Congress on Cell Biology

Posted by on January 16th, 2012

We are proud to announce that the International Congress on Cell Biology will be held for the first time in Latin America. The International Federation for Cell Biology (IFCB) and the Brazilian Society for Cell Biology (SBBC) are working together to host this Meeting in Rio de Janeiro, Brazil, from July 25th through 28th, 2012.
The aim of this Congress is to provide an exciting forum where undergraduate and graduate students, post docs and researchers from around the world can freely discuss about Science, in general, and different aspects of Cell Biology in particular, to start new collaborations and define future trends for cell science and technology. Efforts are underway in putting together a comprehensive and inspiring program broaching at least 30 different topics.

The meeting will be held at Riocentro Exhibition and Convention Center at Avenida Salvador Allende, 6555 - Barra da Tijuca - Rio de Janeiro - RJ - Brazil

The 10th ICCB/16th SBBC Meeting features:
• Plenary lectures, Round Table and Young Investigators sessions with local and international invited speakers
• Concurrent scientific sessions open to all attendees
• Pre-meeting workshops on state-of the art techniques and approaches
• Exhibit booths displaying an array of equipment, supplies and publications from local and international companies
• 2 days of poster sessions

Congress Language:

Because this is an international meeting, all activities will be conducted and sponken in English.

For more information, contact: iccb2012@interevent.com.br
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Dates for your calendar

Posted by on January 16th, 2012

Conference season is about to kick off, so here are a few registration dates for various meetings you might want to attend. If you know of any others, please leave a comment below. And of course keep checking the events calendar (and add any events not on there yet - see the help page for instructions on creating accounts and adding events)

 

January 16 (today!) - early registration deadline for the Sixth International Symposium on Vertebrate Sex Determination. They’re based in Hawaii, so you may still make the early registration deadline.
January 20 - early registration deadline for Drosophila Meeting (final deadline on February 29)
February 8 - registration/abstracts deadline for the 12th International Conference on Limb Development and Regeneration
March 1 - Application deadline for “The Stem Cell Niche - Development and Disease” in Copenhagen (see poster below)
March 23 - Early registration deadline for the BSDB/BSCB/JSDB meeting

To celebrate the opening of the Copenhagen Stem Cell Centre (DanStem), the foundation is hosting a conference from June 25 to 27. If you’re selected as participant, they will cover hotel, registration, local transport and meals. See poster below for speaker list.
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Free early career scientist places available at The Company of Biologists Workshops!

Posted by on January 10th, 2012

The Company of  Biologists run 3 cutting edge Workshops each year organised by the leading scientists in their fields.   They are small workshops with 30 attendees made up of 20 invited speakers and 10 places for early career scientists. The Workshops this year are;

New Technologies and Applications for Genome Engineering - 25th - 28th March 2012 - UK

Epigenetic Memory - 24th - 27th June 2012 - UK

Imaging in Cell Biology: Where next? - 14th - 17th October 2012 - UK

If you are a student, postdoc or in your first PI position and are interested in attending any of the Workshops detailed above, please contact workshops@biologists.com.  The deadline for applications for the March Workshop is the 21st January.  For more information please see our website - http://workshops.biologists.com.

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VI LASDB International Meeting Early Registration & Abstract Submission Extended up to 20th January, 2012

Posted by on December 17th, 2011


VI LASDB Meeting Montevideo 2012 NEWS

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