Welcome to our monthly trawl for developmental and stem cell biology (and related) preprints.

The preprints this month are hosted on bioRxiv – use these links below to get to the section you want:

Developmental biology

• Patterning & signalling
• Morphogenesis & mechanics
• Genes & genomes
• Stem cells, regeneration & disease modelling
• Plant development
• Evo-devo

Cell Biology

Modelling

Tools & Resources

Developmental biology

| Patterning & signalling

The cell adhesion molecule Echinoid promotes tissue survival and separately restricts tissue overgrowth in Drosophila imaginal discs

Danielle C. Spitzer, William Y. Sun, Anthony Rodríguez-Vargas, Iswar K. Hariharan

Disruption of Fuz in mouse embryos generates hypoplastic hindbrain development and reduced cranial nerve ganglia

Carlo Donato Caiaffa, Yogeshwari S. Ambekar, Manmohan Singh, Ying Linda Lin, Bogdan Wlodarczyk, Salavat R. Aglyamov, Giuliano Scarcelli, Kirill V. Larin, Richard Finnell

Scaling between cell cycle duration and wing growth is regulated by Fat-Dachsous signaling in Drosophila

Andrew Liu, Jessica O’Connell, Farley Wall, Richard W. Carthew

Canonical Wnt transcriptional complexes are essential for induction of nephrogenesis but not maintenance or proliferation of nephron progenitors

Helena Bugacov, Andrew McMahon, Balint Der, Sunghyun Kim, Nils Olof Lindstrom

Fgf signalling is required for gill slit formation in the skate, Leucoraja erinacea

Jenaid M Rees, Michael A Palmer, J. Andrew Gillis

Tgfbr1 regulates lateral plate mesoderm and endoderm reorganization during the trunk to tail transition

Anastasiia Lozovska, Ana N&oacutevoa, Ying-Yi Kuo, Arnon Dias Jurberg, Gabriel G Martins, Anna-Katerina Hadjantonakis, Moises Mallo

Angpt1 binding to Tie1 regulates the signaling required for lymphatic vessel development in zebrafish

Nanami Morooka, Ning Gui, Koji Ando, Keisuke Sako, Moe Fukumoto, Melina Hußmann, Stefan Schulte-Merker, Naoki Mochizuki, Hiroyuki Nakajima

Specification and survival of post-metamorphic branchiomeric neurons in the hindbrain of a non-vertebrate chordate

Eduardo D. Gigante, Katarzyna M. Piekarz, Alexandra Gurgis, Leslie Cohen, Florian Razy-Krajka, Sydney Popsuj, Hussan S. Ali, Shruthi Mohana Sundaram, Alberto Stolfi

Hedgehog signaling is required for the maintenance of mesenchymal nephron progenitors

Eunah Chung, Patrick Deacon, Yueh-Chiang Hu, Hee-Woong Lim, Joo-Seop Park

Modular control of time and space during vertebrate axis segmentation

Ali Seleit, Ian Brettell, Tomas W Fitzgerald, Carina Vibe, Felix Loosli, Joachim Wittbrodt, Kiyoshi Naruse, Ewan Birney, Alexander Aulehla

Prickle and Ror modulate Dishevelled-Vangl interaction to regulate non-canonical Wnt signaling during convergent extension

Jianbo Wang, Chenbei Chang, Hwa-seon Seo, Deli Yu, Ivan Popov, Jiahui Tao, Allyson Angermeier, Bingdong Sha, Jeffery Axelrod

Epigenetic heterogeneity of the Notch signaling components in the developing human retina

Takahiro Nakayama, Masaharu Yoshihara, Satoru Takahashi

Zn2+ is Essential for Ca2+ Oscillations in Mouse Eggs

Hiroki Akizawa, Emily M Lopes, Rafael A Fissore

Cadherin Adhesion Complexes Direct Cell Aggregation in the Epithelial Transition of Wnt-Induced Nephron Progenitor Cells

Balint Der, Helena Bugacov, Bohdana-Myroslava Briantseva, Andrew P. McMahon

Spatial patterning regulates neuron numbers in the Drosophila visual system

Jennifer Malin, Yen-Chung Chen, Félix Simon, Evelyn Keefer, Claude Desplan

β1 integrins regulate cellular behaviors and cardiomyocyte organization during ventricular wall formation

Lianjie Miao, Micah Castillo, Yangyang Lu, Yongqi Xiao, Yu Liu, Alan R Burns, Ashok Kumar, Preethi Gunaratne, C. Michael DiPersio, Mingfu Wu

Spatiotemporal dynamics of cytokines expression dictate fetal liver hematopoiesis

Marcia Mesquita Peixoto, Francisca Soares-da-Silva, Valentin Bonnet, Gustave Ronteix, Rita Faria Santos, Marie-Pierre Mailhe, Xing Feng, João Pedro Pereira, Emanuele Azzoni, Giorgio Anselmi, Marella de Bruijn, Charles N. Baroud, Perpétua Pinto-do-Ó, Ana Cumano

Differential regulation of the proteome and phosphosproteome along the dorso-ventral axis of the early Drosophila embryo

Juan Manuel Gomez, Hendrik Nolte, Elisabeth Vogelsang, Bipasha Dey, Michiko Takeda, Girolamo Giudice, Miriam Faxel, Alina Cepraga, Robert Patrick Zinzen, Marcus Krüger, Evangelia Petsalaki, Yu-Chiun Wang, Maria Leptin

Wnt signaling regulates ion channel expression to promote smooth muscle and cartilage formation in developing mouse trachea

Nicholas X. Russell, Kaulini Burra, Ronak Shah, Natalia Bottasso-Arias, Megha Mohanakrishnan, John Snowball, Harshavardhana H. Ediga, Satish K Madala, Debora Sinner

| Morphogenesis & mechanics

Hierarchical Morphogenesis of Swallowtail Butterfly Wing Scale Nanostructures

Kwi Shan Seah, Vinodkumar Saranathan

Two distinct mechanisms of Plexin A function in Drosophila optic lobe lamination and morphogenesis

Maria E Bustillo, Jessica Douthit, Sergio Astigarraga, Jessica E Treisman

Periods of environmental sensitivity couple larval behavior and development

Denis F. Faerberg, Erin Z. Aprison, Ilya Ruvinsky

Aberrant tissue stiffness impairs neural tube development in Mthfd1l mutant mouse embryos

Yogeshwari S. Ambekar, Carlo Donato Caiaffa, Bogdan Wlodarczyk, Manmohan Singh, Alexander W. Schill, John Steele, Salavat R. Aglyamov, Giuliano Scarcelli, Richard H. Finnell, Kirill V. Larin

Thymus formation in uncharted embryonic territoriesv

Isabel Alcobia, Margarida Gama-Carvalho, Leonor Magalhães, Vitor Proa, Domingos Henrique, Hélia Neves

Identification of Core Yeast Species and Microbe-Microbe Interactions Impacting Larval Growth of Drosophila in the Wild

Ayumi Mure, Yuki Sugiura, Rae Maeda, Kohei Honda, Nozomu Sakurai, Yuuki Takahashi, Masayoshi Watada, Toshihiko Katoh, Aina Gotoh, Yasuhiro Gotoh, Itsuki Taniguchi, Keiji Nakamura, Tetsuya Hayashi, Takane Katayama, Tadashi Uemura, Yukako Hattori

Morphodynamics of human early brain organoid development

Akanksha Jain, Gilles Gut, Fátima Sanchís Calleja, Ryoko Okamoto, Simon Streib, Zhisong He, Fides Zenk, Malgorzata Santel, Makiko Seimiya, René Holtackers, Sophie Martina Johanna Jansen, J. Gray Camp, Barbara Treutlein

Lineage-based scaling of germline intercellular bridges during oogenesis

Umayr Shaikh, Kathleen Sherlock, Julia Wilson, William Gilliland, Lindsay Lewellyn

An atypical basement membrane forms a midline barrier in left-right asymmetric gut development

Cora Demler, John Coates Lawlor, Ronit Yelin, Dhana Llivichuzcha-Loja, Lihi Shaulov, David Kim, Megan Stewart, Frank Lee, Thomas Schultheiss, Natasza Kurpios

Lymphatic vessel development in human embryos

Shoichiro Yamaguchi, Natsuki Minamide, Hiroshi Imai, Tomoaki Ikeda, Masatoshi Watanabe, Kyoko Imanaka-Yoshida, Kazuaki Maruyama

Alternating polarity integrates chemical and mechanical cues to drive tissue morphogenesis

Miriam Osterfield

A mechanically regulated liquid-liquid phase separation of the transcriptional regulator Tono instructs muscle development

Xu Zhang, Jerome Avellaneda, Maria Lynn Spletter, Sandra B Lemke, Pierre Mangeol, Bianca H Habermann, Frank Schnorrer

Stabilization of epithelial β-catenin compromises mammary cell fate acquisition and branching morphogenesis

Jyoti Prabha Satta, Qiang Lan, Makoto Mark Taketo, Marja Liisa Mikkola

Cylicins are a structural component of the sperm calyx being indispensable for male fertility in mice and human

Simon Schneider, Andjela Kovacevic, Michelle Mayer, Ann-Kristin Dicke, Lena Arévalo, Sophie A. Koser, Jan N. Hansen, Samuel Young, Christoph Brenker, Sabine Kliesch, Dagmar Wachten, Gregor Kirfel, Timo Strünker, Frank Tüttelmann, Hubert Schorle

The differentiation and integration of the hippocampal dorsoventral axis are controlled by two nuclear receptor genes

Xiong Yang, Rong Wan, Zhiwen Liu, Su Feng, Jiaxin Yang, Naihe Jing, Ke Tang

Primate-expressed EPIREGULIN promotes basal progenitor proliferation in the developing neocortex

Paula Cubillos, Nora Ditzer, Annika Kolodziejczyk, Gustav Schwenk, Janine Hoffmann, Theresa M. Schütze, Razvan P. Derihaci, Cahit Birdir, Johannes E. M. Köllner, Andreas Petzold, Mihail Sarov, Ulrich Martin, Katherine R. Long, Pauline Wimberger, Mareike Albert

| Genes & genomes

Single-cell transcriptome landscape of developing fetal gonads defines somatic cell lineage specification in humans

A. Lardenois, A. Suglia, CL. Moore, B. Evrard, L. Noël, P. Rivaud, A. Besson, M. Toupin, S. Léonard, L. Lesné, I. Coiffec, S. Nef, V. Lavoué, O. Collin, A. Chédotal, S. Mazaud-Guittot, F. Chalmel, AD. Rolland

The TOP-2-condensin II axis silences transcription during germline specification in C. elegans

Mezmur D. Belew, Emilie Chien, Matthew Wong, W. Matthew Michael

Transcriptional control of compartmental boundary positioning during Drosophila wing development

Gustavo Aguilar, Michèle Sickmann, Dimitri Bieli, Gordian Born, Markus Affolter, Martin Müller

Using human genetics to develop strategies to increase erythropoietic output from genome-edited hematopoietic stem and progenitor cells

Joab Camarena, Sofia E. Luna, Jessica P. Hampton, Kiran R. Majeti, Carsten T. Charlesworth, Eric Soupene, Vivien A. Sheehan, M. Kyle Cromer, Matthew H. Porteus

Defining the cellular complexity of the zebrafish bipotential gonad

Michelle E. Kossack, Lucy Tian, Kealyn Bowie, Jessica S. Plavicki

Polyadenylation of mRNAs encoding secreted proteins by TENT5 family of enzymes is essential for gametogenesis in mice

Michał Brouze, Agnieszka Czarnocka-Cieciura, Olga Gewartowska, Monika Kusio-Kobiałka, Kamil Jachacy, Marcin Szpila, Bartosz Tarkowski, Jakub Gruchota, Paweł Krawczyk, Seweryn Mroczek, Ewa Borsuk, Andrzej Dziembowski

A dynamic in vitro model of Down Syndrome neurogenesis with Trisomy 21 gene dosage correction

Prakhar Bansal, Erin C Banda, Heather R Glatt-Deeley, Christopher Stoddard, Jeremy W Linsley, Neha Arora, Darcy T Ahern, Yuvabharath Kondaveeti, Michael Nicouleau, Miguel Sabariego-Navarro, Mara Dierssen, Steve Finkbeiner, Stefan F Pinter

Dynamics of chromatin accessibility during human first-trimester neurodevelopment

Camiel C.A. Mannens, Lijuan Hu, Peter Lonnerberg, Marijn Schipper, Caleb Reagor, Xiaofei Li, Xiaoling He, Roger A. Barker, Erik Sundstrom, Danielle Posthuma, Sten Linnarsson

Multi-omics analyses identify transcription factor interplay in corneal epithelial fate determination and disease

Jos Smits, Dulce Lima Cunha, Jieqiong Qu, Nicholas Owen, Lorenz Latta, Nora Szentmary, Berthold Seitz, Lauriane N. Roux, Mariya Moosajee, Daniel Aberdam, Simon J. van Heeringen, Huiqing Zhou

PRDM16 co-operates with LHX2 to shape the human brain

Varun Suresh, Bidisha Bhattacharya, Rami Yair Tshuva, Miri Danan Gotthold, Tsviya Olender, Mahima Bose, Saurabh J. Pradhan, Bruria Ben Zeev, Richard Scott Smith, Shubha Tole, Sanjeev Galande, Corey Harwell, José-Manuel Baizabal, Orly Reiner

COUP-TFII regulates early bipotential gonad signaling and commitment to ovarian progenitors

Lucas G. A. Ferreira, Marina M. L. Kizys, Gabriel A. C. Gama, Svenja Pachernegg, Gorjana Robevska, Andrew H. Sinclair, Katie L. Ayers, Magnus R. Dias da Silva

Sphingolipid metabolism is spatially regulated in the developing embryo by SOXE genes

Michael L. Piacentino, Aria J. Fasse, Alexis Camacho-Avila, Ilya Grabylnikov, Marianne E. Bronner

Temperature variation drives coordinated scaling of temporal and dynamic features of transcription in embryonic development

Gabriella Martini, Hernan Garcia

Epigenetic Regulation of Endothelial Extracellular Matrix Components is Critical for Murine Lung Development

Meng-Ling Wu, Kate Wheeler, Robert Silasi-Mansat, Florea Lupu, Courtney T. Griffin

Female germline expression of OVO transcription factor bridges Drosophila generations

Leif Benner, Savannah Muron, Brian Oliver

The molecular basis of macrochaete diversification highlighted by a single-cell atlas of Bicyclus anynana butterfly pupal forewings

Anupama Prakash, Emilie Dion, Antónia Monteiro

FOXL2 interaction with different binding partners regulates the dynamics of ovarian development

Roberta Migale, Michelle Neumann, Richard Mitter, Mahmoud-Reza Rafiee, Sophie Wood, Jessica Olsen, Robin Lovell-Badge

| Stem cells, regeneration & disease modelling

A dynamic in vitro model of Down Syndrome neurogenesis with Trisomy 21 gene dosage correction

Prakhar Bansal, Erin C Banda, Heather R Glatt-Deeley, Christopher Stoddard, Jeremy W Linsley, Neha Arora, Darcy T Ahern, Yuvabharath Kondaveeti, Michael Nicouleau, Miguel Sabariego-Navarro, Mara Dierssen, Steve Finkbeiner, Stefan F Pinter

Defined human PSC culture conditions robustly maintain human PSC pluripotency through Ca2+ signaling.

Ilse Eidhof, Malin Kele, Mansoureh Shahsavani, Benjamin Ulfenborg, Dania Winn, Per Uhlen, Anna Falk

The combination of CD49b and CD229 reveals a subset of multipotent progenitors with short-term activity within the hematopoietic stem cell compartment

Ece Somuncular, Tsu-Yi Su, Ozge Dumral, Anne-Sofie Johansson, Sidinh Luc

3D model of mouse embryonic pancreas and endocrine compartment using stem cell-derived mesoderm and pancreatic progenitors

Shlomit Edri, Vardit Rosenthal, Or Ginsburg, Abigail Newman Frisch, Christophe E. Pierreux, Nadav Sharon, Shulamit Levenberg

ECM degradation in the stump region induced by Fgf during functional joint regeneration in frogs

Haruka Matsubara, Takeshi Inoue, Kiyokazu Agata

Improved rescue of immature oocytes obtained from conventional gonadotropin stimulation cycles via human induced pluripotent stem cell-derived ovarian support cell co-culture

Alexa Giovannini, Sabrina Piechota, Maria Marchante, Kathryn S Potts, Graham Rockwell, Bruna Paulsen, Alexander D Noblett, Samantha L Estevez, Alexandra B Figueroa, Caroline Aschenberger, Dawn A Kelk, Marcy Forti, Shelby Marcinyshyn, Ferran Barrachina, Klaus Wiemer, Marta Sanchez, Pedro Belchin, Merrick Pierson Smela, Patrick R.J. Fortuna, Pranam Chatterjee, David H McCulloh, Alan Copperman, Daniel Ordonez-Perez, Joshua U Klein, Christian C Kramme

Loss of PAX6 alters the excitatory/inhibitory neuronal ratio in human cerebral organoids

Wai Kit Chan, Danilo Negro, Victoria M Munro, Helen Marshall, Zrinko Kozić, Megan Brown, Mariana Beltran, Neil C Henderson, David J Price, John O Mason

The Interferon γ Pathway Enhances Pluripotency and X-Chromosome Reactivation in iPSC reprogramming

Mercedes Barrero, Anna V. López-Rubio, Aleksey Lazarenkov, Enrique Blanco, Moritz Bauer, Luis G. Palma, Anna Bigas, Luciano Di Croce, José Luis Sardina, Bernhard Payer

Myogenetic Oligodeoxynucleotide Induces Myocardial Differentiation of Murine Pluripotent Stem Cells

Mina Ishioka, Yuma Nihashi, Yoichi Sunagawa, Koji Umezawa, Takeshi Shimosato, Hiroshi Kagami, Tatsuya Morimoto, Tomohide Takaya

Chromatin and gene expression changes during female Drosophila germline stem cell development illuminate the biology of highly potent stem cells

Liang-Yu Pang, Steven DeLuca, Haolong Zhu, John M. Urban, Allan C. Spradling

Sclerotome-derived vascular smooth muscle progenitors contribute to the haematopoietic stem cell specification niche

Clair M. Kelley, Nicole O. Glenn, Dafne Gays, Massimo M. Santoro, Wilson K. Clements

A distinct class of hematopoietic stem cells develop from the human yellow bone marrow

Tammy T Nguyen, Zinger Yang Loureiro, Anand Desai, Tiffany DeSouza, Shannon Joyce, Lyne Khair, Amruta Samant, Haley Cirka, Javier Solivan-Rivera, Rachel Ziegler, Michael Brehm, Louis M Messina, Silvia Corvera

Generation of isogenic models of Angelman syndrome and Prader-Willi syndrome in CRISPR/Cas9-engineered human embryonic stem cells

Rachel B Gilmore, Dea Gorka, Christopher Stoddard, Justin Cotney, Stormy Chamberlain

Functional characterization of gene regulatory elements and neuropsychiatric disease-associated risk loci in iPSCs and iPSC-derived neurons

Xiaoyu Yang, Ian R. Jones, Poshen B. Chen, Han Yang, Xingjie Ren, Lina Zheng, Bin Li, Yang E. Li, Quan Sun, Jia Wen, Cooper Beaman, Xiekui Cui, Yun Li, Wei Wang, Ming Hu, Bing Ren, Yin Shen

Self-assembly vascularized human cardiac organoids model cardiac diseases in petri dishes and in mice

Qixing Zhong, Yao He, Li Teng, Yinqian Zhang, Ting Zhang, Yinbing Zhang, Qinxi Li, Bangcheng Zhao, Daojun Chen, Zhihui Zhong

Connexin 41.8 mediates the correct temporal induction of haematopoietic stem and progenitor cells

Tim Petzold, Masakatsu Watanabe, Julien Y. Bertrand

Investigating the developmental onset of regenerative potential in the annelid Capitella teleta

Alicia A. Boyd, Elaine C. Seaver

Orchestration of pluripotent stem cell genome reactivation during mitotic exit

Silja Placzek, Ludovica Vanzan, David M. Suter

| Plant development

Nutrient levels control root growth responses to high ambient temperature in plants

Sanghwa Lee, Julia Showalter, Ling Zhang, Gaëlle Cassin-Ross, Hatem Rouached, Wolfgang Busch

Does late water deficit induce root growth or senescence in wheat?

Kanwal Shazadi, John T. Christopher, Karine Chenu

NAC1 directs CEP1-CEP3 peptidase expression and modulates root hair growth in Arabidopsis

Diana R. Rodríguez-García, Yossmayer del Carmen Rondón Guerrero, Lucía Ferrero, Andrés Hugo Rossi, Esteban A. Miglietta, Ariel A. Aptekmann, Eliana Marzol, Javier Martínez Pacheco, Mariana Carignani, Victoria Berdion Gabarain, Leonel E. Lopez, Gabriela Díaz Dominguez, Cecilia Borassi, José Juan Sánchez-Serrano, Lin Xu, Alejandro D. Nadra, Enrique Rojo, Federico Ariel, José M. Estevez

BrrRCO, encoding a homeobox protein, is involved in leaf lobe development in Brassica rapa

Pan Li, Tongbing Su, Yudi Wu, Hui Li, Limin Wang, Fenglan Zhang, Shuancang Yu, Zheng Wang

ZmPILS6 is an auxin efflux carrier required for maize root morphogenesis

Craig L. Cowling, Arielle L. Homayouni, Jodi B. Callwood, Maxwell R. McReynolds, Jasper Khor, Haiyan Ke, Melissa A. Draves, Katayoon Dehesh, Justin W. Walley, Lucia C. Strader, Dior R. Kelley

Melatonin induces endoreduplication through oxidative DNA-damage triggering lateral root formation in onions

Sukhendu Maity, Rajkumar Guchhait, Kousik Pramanick

Spatiotemporally distinct responses to mechanical forces shape the developing seed of Arabidopsis

Amelie Bauer, Camille Bied, Adrien Delattre, Gwyneth Ingram, John F Golz, Benoit Landrein

Chitosan stimulates root hair callose deposition and inhibits root hair growth

Matēj Drs, Samuel Haluška, Eliška Škrabálková, Pavel Krupař, Andrea Potocká, Lucie Brejšková, Karel Muller, Natalia Serrano, Aline Voxeur, Samantha Vernhettes, Jitka Ortmannová, George Caldarescu, Matyas Fendrych, Martin Potocký, Viktor Žárský, Tamara Pečenková

A pectin-binding peptide with a structural and signaling role in the assembly of the plant cell wall

Sebastjen Schoenaers, Hyun Kyung Lee, Martine Gonneau, Elvina Faucher, Thomas Levasseur, Elodie Akary, Naomi Claeijs, Steven Moussu, Caroline Broyart, Daria Balcerowicz, Hamada AbdElgawad, Andrea Bassi, Daniel Santa Cruz Damineli, Alex Costa, Jose A Feijo, Celine Moreau, Estelle Bonnin, Bernard Cathala, Julia Santiago, Herman Hofte, Kris Vissenberg

Calcium regulation of the Arabidopsis Na+/K+ transporter HKT1;1 improves seed germination under salt stress

Ancy E.J. Chandran, Aliza Finkler, Tom Aharon Hait, Yvonne Kiere, Sivan David, Metsada Pasmanik-Chor, Doron Shkolnik

An ancient role for the CYP73 gene family in t-cinnamic acid 4-hydroxylation, phenylpropanoid biosynthesis and embryophyte development

Samuel Knosp, Lucie Kriegshauser, Kanade Tatsumi, Ludivine Malherbe, Gertrud Wiedemann, Bénédicte Bakan, Takayuki Kohchi, Ralf Reski, Hugues Renault

Distinct clades of TELOMERE REPEAT BINDING transcriptional regulators interplay to regulate plant development

Simon Amiard, Léa Feit, Lauriane Simon, Samuel Le Goff, Loriane Loizeau, Léa Wolff, Falk Butter, Clara Bourbousse, Fredy Barneche, Christophe Tatout, Aline. V. Probst

The Auxin Response Factor ARF27 is required for maize root morphogenesis

Linkan Dash, Maxwell R. McReynolds, Melissa A. Draves, Rajdeep S. Khangura, Rebekah L. Muench, Jasper Khor, Jodi B. Callwood, Craig L. Cowling, Ludvin Mejia, Michelle G. Lang, Brian P. Dilkes, Justin W. Walley, Dior R. Kelley

Overexpression of tomato SlBBX16 and SlBBX17 impacts fruit development and GA biosynthesis

Valentina Dusi, Federica Pennisi, Daniela Fortini, Alejandro Atarès, Stephan Wenkel, Barbara Molesini, Tiziana Pandolfini

Growth directions and stiffness across cell layers determine whether tissues stay smooth or buckle

Avilash S. Yadav, Lilan Hong, Patrick M. Klees, Annamaria Kiss, Xi He, Iselle M. Barrios, Michelle Heeney, Anabella Maria D. Galang, Richard S. Smith, Arezki Boudaoud, Adrienne H.K. Roeder

Water fluxes contribute to growth patterning in shoot meristems

Juan Alonso-Serra, Ibrahim Cheddadi, Annamaria Kiss, Guillaume Cerutti, Claire Lionnet, Christophe Godin, Olivier Hamant

A low-cost and open-source imaging platform reveals spatiotemporal insight into Arabidopsis leaf elongation and movement

Lisa Oskam, Basten L. Snoek, Chrysoula K. Pantazopoulou, Hans van Veen, Sanne E. A. Matton, Rens Dijkhuizen, Ronald Pierik

Cell Fate Programming by Transcription Factors and Epigenetic Machinery in Stomatal Development

Ao, Andrea Mair, Juliana L. Matos, Macy Vollbrecht, Shou-Ling Xu, Dominique C. Bergmann

| Evo-devo

Craniofacial diversity across Danionins and the effects of TH status on craniofacial morphology of two Danio species

Stacy V Nguyen, Rachel S Lee, Emma Mohlmann, Gabriella Petrullo, John Blythe, Isabella Ranieri, Sarah McMenamin

Comparative genomics of two closely related coral species with different spawning seasons reveals genomic regions possibly associated with gametogenesis

Shiho Takahashi-Kariyazono, Akira Iguchi, Yohey Terai

Clearwing butterflies challenge the thermal melanism hypothesis

Violaine Ossola, Fabien Pottier, Charline Pinna, Katia Bougiouri, Aurélie Tournié, Anne Michelin, Christine Andraud, Doris Gomez, Marianne Elias

A mathematical framework for evo-devo dynamics

Mauricio González-Forero

Conserved switch genes regulate a novel cannibalistic morph after whole genome duplication

Sara Wighard, Ralf J. Sommer, Hanh Witte

The role of heterochronic gene expression and regulatory architecture in early developmental divergence

Nathan D. Harry, Christina Zakas

Sox21b underlies the rapid diversification of a novel male genital structure between Drosophila species

Amber M. Ridgway, Emily Hood, Javier Figueras Jimenez, Maria D. S. Nunes, Alistair P. McGregor

Evo-devo dynamics of hominin brain size

Mauricio González-Forero

Evolution of parent-of-origin effects on placental gene expression in house mice

Fernando Rodriguez-Caro, Emily C. Moore, Jeffrey M. Good

Cell Biology

Vertical transmission of maternal DNA through extracellular vesicles modulates embryo bioenergetics during the periconceptional period

David Bolumar, Javier Moncayo-Arlandi, Javier Gonzalez-Fernandez, Ana Ochando, Inmaculada Moreno, Ana Monteagudo-Sanchez, Carlos Marin, Antonio Diez, Paula Fabra, Miguel Ángel Checa, Juan José Espinos, David K. Gardner, Carlos Simon, Felipe Vilella

Robo1 loss has pleiotropic effects on postnatal development and survival

Nicole A. Kirk, Ye Eun Hwang, Seul Gi Lee, Kee-Beom Kim, Kwon-Sik Park

Actomyosin-mediated apical constriction promotes physiological germ cell death in C. elegans

Tea Kohlbrenner, Simon Berger, Tinri Aegerter-Wilmsen, Ana Laranjeira, Andrew deMello, Alex Hajnal

Fatty acid amide hydrolase drives adult mammary gland development by promoting luminal cell differentiation

Isabel Tundidor, Marta Seijo-Vila, Sandra Blasco-Benito, María Rubert-Hernández, Gema Moreno-Bueno, Laura Bindila, Rubén Fernández de la Rosa, Manuel Guzmán, Cristina Sánchez, Eduardo Pérez-Gómez

Purine biosynthesis pathways are required for myogenesis in Xenopus laevis

Maëlle Duperray, Elodie Henriet, Christelle Saint-Marc, Eric Boué-Grabot, Bertrand Daignan-Fornier, Karine Massé, Benoît Pinson

Cyclin B3 is a dominant fast-acting cyclin that drives rapid early embryonic mitoses

Pablo Lara-Gonzalez, Smriti Variyar, Jacqueline Budrewicz, Aleesa Schlientz, Neha Varshney, Andrew Bellaart, Shabnam Moghareh, Anh Cao Ngoc Nguyen, Karen Oegema, Arshad Desai

Neuronal IL-17 controls C. elegans developmental diapause through CEP-1/p53

Abhishiktha Godthi, Sehee Min, Das Srijit, Johnny Cruz-Corchado, Andrew Deonarine, Kara Misel-Wuchter, Priya D. Issuree, Veena Prahlad

Reorganization of Septin structures regulates early myogenesis

Vladimir Ugorets, Paul-Lennard Mendez, Dmitrii Zagrebin, Giulia Russo, Yannic Kerkhoff, Tim Herpelinck, Georgios Kotsaris, Jerome Jatzlau, Sigmar Stricker, Petra Knaus

Modelling

A model-based assessment of adaptation in embryonic life histories of annual killifish

Tom JM Van Dooren

How a reaction-diffusion signal can control spinal cord regeneration in axolotls: A modelling study

Valeria Caliaro, Diane Peurichard, Osvaldo Chara

Spectral decomposition unlocks ascidian morphogenesis

Joel Dokmegang, Emmanuel Faure, Patrick Lemaire, Edwin Munro, Madhav Mani

Intra-leaf modeling of Cannabis leaflet shape produces synthetic leaves that predict genetic and developmental identities

Manica Balant, Teresa Garnatje, Daniel Vitales, Oriane Hidalgo, Daniel H. Chitwood

Causal models of human growth and their estimation using temporally-sparse data

John A. Bunce, Catalina I. Fernández, Caissa Revilla-Minaya

Morphogen gradients can convey position and time in growing tissues

Roman Vetter, Dagmar Iber

And Growth on Form? How tissue expansion generates novel shapes, colours and enhance biological functions of Turing colour patterns of Eukaryotes

Pierre Galipot

Tools & Resources

The Mediterranean mussel, Mytilus galloprovincialis, a novel model for developmental studies of mollusks

Angelica Miglioli, Marion Tredez, Manon Boosten, Camille Sant, Joao E. Carvalho, Philippe Dru, Laura Canesi, Michael Schubert, Remi Dumollard

An Atlas of the Developing Drosophila Visual System Glia and Subcellular mRNA Localization of Transcripts in Single Cells

Amanda A. G. Ferreira, Claude Desplan

CONDITIONALLY MUTANT ANIMAL MODEL FOR INVESTIGATING THE INVASIVE TROPHOBLAST CELL LINEAGE

Khursheed Iqbal, Brandon Nixon, Benjamin Crnkovich, Esteban M. Dominguez, Ayelen Moreno-Irusta, Regan L. Scott, Ha T.H. Vu, Geetu Tuteja, Jay L. Vivian, Michael J. Soares

Screening for variable drug responses using human iPSC cohorts

Melpomeni Platani, Hao Jiang, Lindsay Davidson, Santosh Hariharan, Regis Doyonnas, Angus I. Lamond, Jason R. Swedlow

Volumetric trans-scale imaging of massive quantity of heterogeneous cell populations in centimeter-wide tissue and embryo

Taro Ichimura, Taishi Kakizuka, YuKi Sato, Keiko Itano, Kaoru Seiriki, Hitoshi Hashimoto, Hiroya Itoga, Shuichi Onami, Takeharu Nagai

Clonal and Scalable Endothelial Progenitor Cell Lines from Human Pluripotent Stem Cells

Jieun Lee, Hal Sternberg, Paola A. Bignone, James Murai, Nafees N. Malik, Michael D. West, Dana Larocca

Early spiral arteriole remodeling in the uterine-placental interface: a rat model

Sarah J. Bacon, Yuxi Zhu, Priyanjali Ghosh

Automated staging of zebrafish embryos with deep learning

Rebecca A. Jones, Matthew J. Renshaw, Danelle Devenport, David J. Barry

A simplified and rapid in situ hybridization protocol for planarians

Andrew J. Gaetano, Ryan S. King

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CartoCell, a high-content pipeline for 3D image analysis, unveils cell morphology patterns in epithelia.

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Research practice & education

Is N-Hacking Ever OK? A simulation-based inquiry

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ChatGPT applications in Academic Research: A Review of Benefits, Concerns, and Recommendations

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Gender differences in submission behavior exacerbate publication disparities in elite journals

Isabel Basson, Chaoqun Ni, Giovanna Badia, Nathalie Tufenkji, Cassidy R. Sugimoto, Vincent Larivière

ChatGPT identifies gender disparities in scientific peer review

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Analytical code sharing practices in biomedical research

Nitesh Kumar Sharma, Ram Ayyala, Dhrithi Deshpande, Yesha M Patel, Viorel Munteanu, Dumitru Ciorba, Andrada Fiscutean, Mohammad Vahed, Aditya Sarkar, Ruiwei Guo, Andrew Moore, Nicholas Darci-Maher, Nicole A Nogoy, Malak S. Abedalthagafi, Serghei Mangul

“Important enough to show the world”: Using Authentic Research Opportunities and Micropublications to Build Students’ Science Identities

Lisa DaVia Rubenstein, Kelsey A. Woodruff, April M. Taylor, James B. Olesen, Philip J. Smaldino, Eric M. Rubenstein

The faculty-to-faculty mentorship experience: a survey on challenges and recommendations for improvements

Sarvenaz Sarabipour, Steven J Burgess, Natalie M Niemi, Christopher T Smith, Alexandre W Bisson Filho, Ahmed Ibrahim, Kelly Clark

Graduate student mentorship as a target for diversifying the biological sciences

Reena Debray, Emily Dewald-Wang, Katherine Ennis

A framework for decolonising and diversifying biomedical sciences curricula: rediscovery, representation and readiness

Tianqi Lu, Zafar I. Bashir, Alessia Dalceggio, Caroline M. McKinnon, Lydia Miles, Amy Mosley, Bronwen R. Burton, Alice Robson

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