October in preprints
Posted by the Node, on 4 November 2021
Welcome to our monthly trawl for developmental and stem cell biology (and related) preprints.
The preprints this month are hosted on bioRxiv, arXiv and preprints.org – use these links to get to the section you want.
- Patterning & signalling
- Morphogenesis & mechanics
- Genes & genomes
- Stem cells, regeneration & disease modelling
- Plant development
- Evo-devo
Developmental biology
| Patterning & signalling
“Neighbourhood watch” model: embryonic epiblast cells assess positional information in relation to their neighbours
Hyung Chul Lee, Cato Hastings, Nidia M.M. Oliveira, Rubén Pérez-Carrasco, Karen M. Page, Lewis Wolpert, Claudio D. Stern
The post-transcriptional regulation of TFs in immature motoneurons shapes the axon-muscle connectome
Wenyue Guan, Stéphanie Bellemin, Mathilde Bouchet, Lalanti Venkatasubramanian, Camille Guillermin, Anne Laurençon, Kabir Chérif, Aurélien Darmas, Christophe Godin, Séverine Urdy, Richard S. Mann, Jonathan Enriquez
Innexin function dictates the spatial relationship between distal somatic cells in the Caenorhabditis elegans gonad without impacting the germline stem cell pool
Theadora Tolkin, Ariz Mohammed, Todd Starich, Tim Schedl, E. Jane Albert Hubbard, David Greenstein
Inhibition of adrenergic β1-AR/Gαs signaling promotes cardiomyocyte proliferation through activation of RhoA-YAP axis
Masahide Sakabe, Michael Thompson, Nong Chen, Mark Verba, Aishlin Hassan, Richard Lu, Mei Xin
Precartilage condensation during limb skeletogenesis occurs by tissue phase separation controlled by a bistable cell-state switch with suppressed oscillatory dynamics
T. Glimm, B. Kaźmierczak, C. Cui, S.A. Newman, R. Bhat
Antennapedia regulates metallic silver wing scale development and cell shape in Bicyclus anynana butterflies
Anupama Prakash, Cédric Finet, Vinodkumar Saranathan, Antónia Monteiro
A dual involvement of Protocadherin-18a in stromal cell development guides the formation of a functional hematopoietic niche
Anne-Lou Touret, Catherine Vivier, Anne Schmidt, Philippe Herbomel, Emi Murayama
V-type H+ ATPase Activity is Required for Embryonic Dorsal-Ventral Symmetry Breaking
Daphne Schatzberg, Christopher F. Thomas, Patrick Reidy, Sarah E. Hadyniak, Viktoriya Skidanova, Matthew Lawton, Luz Dojer, Shweta Kitchloo, Daniel T. Zuch, Cynthia A. Bradham
Strip1 regulates retinal ganglion cell survival by suppressing Jun-mediated apoptosis to promote retinal neural circuit formation
Mai Ahmed, Yutaka Kojima, Ichiro Masai
Repression of MAPK/Erk signaling by Efnb2-Ephb4-Rasa1 is required for lymphatic valve formation
Yaping Meng, Tong Lv, Junfeng Zhang, Anming Meng, Shunji Jia
Oxidative stress induces inflammation of lens cells and triggers immune surveillance of ocular tissues
Brian Thompson, Emily A. Davidson, Ying Chen, David J. Orlicky, David C. Thompson, Vasilis Vasiliou
Maf is a regulator of differentiation for gut immune epithelial cell Microfold cell (M cell)
Joel Johnson George, Fábio Tadeu Arrojo Martins, Laura Martin-Diaz, Keijo Viiri
Optogenetic control of the Bicoid morphogen reveals fast and slow modes of gap gene regulation
Anand P. Singh, Ping Wu, Sergey Ryabichko, João Raimundo, Michael Swan, Eric Wieschaus, Thomas Gregor, Jared E. Toettcher
Early postnatal activation of the hypoxia pathway disrupts β-cell function
Juxiang Yang, Batoul Hammoud, Abigail Ridler, Kyoung-Jae Won, Toshinori Hoshi, Charles A. Stanley, Diana E. Stanescu, Amanda M. Ackermann
WUSCHEL-Related Homeobox Genes Cooperate with Cytokinin Signalling to Promote Bulbil Formation in Lilium lancifolium
Guoren He, Yuwei Cao, Jing Wang, Meng Song, Mengmeng Bi, Yuchao Tang, Leifeng Xu, Panpan Yang, Jun Ming
Constitutive activation of canonical Wnt signaling disrupts choroid plexus epithelial fate
Arpan Parichha, Varun Suresh, Mallika Chatterjee, Aditya Kshirsagar, Lihi Ben-Reuven, Tsviya Olender, M. Mark Taketo, Velena Radosevic, Mihaela Bobic-Rasonja, Sara Trnski, Michael J. Holtzman, Nataša Jovanov Milošević, Orly Reiner, Shubha Tole
Ratio-based sensing of two transcription factors regulates the transit to differentiation
Sebastian M. Bernasek, Jean-François Boisclair Lachance, Nicolás Peláez, Suzy SJ Hur, Rachael Bakker, Heliodoro Tejedor Navarro, Nicelio Sanchez-Luege, Luis A. N. Amaral, Neda Bagheri, Ilaria Rebay, Richard W. Carthew
ERK signaling dissolves ERF Repression Condensates in Living Embryos
Claire J. Weaver, Aleena L. Patel, Stanislav Y. Shvartsman, Michael S. Levine, Nicholas Treen
Direct Reprogramming of Non-limb Fibroblasts to Cells with Properties of Limb Progenitors
Yuji Atsuta, Changhee Lee, Alan R. Rodrigues, Charlotte Colle, Reiko R. Tomizawa, Ernesto G. Lujan, Patrick Tschopp, Joshua M. Gorham, Jean-Pierre Vannier, Christine E. Seidman, Jonathan G. Seidman, Olivier Pourquié, Clifford J. Tabin
Bsh coordinates neuronal fate specification with synaptic connectivity
Chundi Xu, Tyler Ramos, Chris Q. Doe
FGF signalling is involved in cumulus migration in the common house spider Parasteatoda tepidariorum
Ruixun Wang, Linda Karadas, Philipp Schiffer, Matthias Pechmann
Bioactive isoprenoids guide migrating germ cells to the embryonic gonad
Lacy J Barton, Justina Sanny, Emily P Dawson, Marcela Nouzova, Fernando Gabriel Noriega, Matthias Stadtfeld, Ruth Lehmann
Disruption of Epithelial Integrity Drives Mesendoderm Differentiation in Human Induced Pluripotent Stem Cells by Enabling BMP and ACTIVIN Sensing
Diane Rattier, Thomas Legier, Thomas Vannier, Flavio Maina, Rosanna Dono
Independently paced calcium oscillations in progenitor and differentiated cells in an ex vivo epithelial organ
Anna A. Kim, Amanda Nguyen, Marco Marchetti, Denise Montell, Beth. L. Pruitt, Lucy Erin O’Brien
Hepatocyte Cell Cycle Progression Depends on a Transcriptional Repressor Cascade Downstream of Wnt Signaling
Yinhua Jin, Teni Anbarchian, Peng Wu, Abby Sarkar, Matt Fish, Roel Nusse
Tissue-wide coordination of calcium signaling regulates the epithelial stem cell pool during homeostasis
Jessica L Moore, Feng Gao, Catherine Matte-Martone, Shuangshuang Du, Elizabeth Lathrop, Smirthy Ganesan, Lin Shao, Dhananjay Bhaskar, Andy Cox, Caroline Hendry, Bastian Rieck, Smita Krishnaswamy, Valentina Greco
Netrins and receptors control Drosophila optic lobe organization and transmedullary neuron axon targeting
Yu Zhang, Scott Lowe, Xin Li
Mllt11 regulates the migration and neurite outgrowth of cortical projection neurons during development
Danielle Stanton-Turcotte, Karolynn Hsu, Samantha A Moore, Makiko Yamada, James P Fawcett, Angelo Iulianella
A Notch-dependent transcriptional mechanism controls expression of temporal patterning factors in Drosophila medulla
Alokananda Ray, Xin Li
Elevated Hoxb5b expands vagal neural crest pool and blocks enteric neuronal development in zebrafish
Aubrey G. Adam Howard IV, Aaron C Nguyen, Joshua Tworig, Priya Ravisankar, Eileen Willey Singleton, Can Li, Grayson Kotzur, Joshua S Waxman, Rosa A Uribe
Cytonemes coordinate asymmetric signaling and organization in the Drosophila muscle progenitor niche
Akshay Patel, Yicong Wu, Xiaofei Han, Yijun Su, Tim K. Maugel, Hari Shroff, Sougata Roy
A novel role for the extraembryonic area opaca in positioning the primitive streak of the early chick embryo
Hyung Chul Lee, Claudio D. Stern
Notch signaling determines cell-fate specification of the two main types of vomeronasal neurons of rodents
Raghu Ram Katreddi, Ed Zandro M. Taroc, Sawyer M Hicks, Jennifer M Lin, Shuting Liu, Mengqing Xiang, Paolo E. Forni
Temporal cell fate determination in the spinal cord is mediated by the duration of Notch signalling
Craig T. Jacobs, Aarti Kejriwal, Katrinka M. Kocha, Kevin Y. Jin, Peng Huang
TGFβ signaling is required for sclerotome resegmentation during development of the spinal column in Gallus gallus
Sade W. Clayton, Ronisha McCardell, Rosa Serra
| Morphogenesis & mechanics
Tension-driven multi-scale self-organisation in human iPSC-derived muscle fibers
Qiyan Mao, Achyuth Acharya, Alejandra Rodriguez-delaRosa, Fabio Marchiano, Benoit Dehapiot, Ziad Al Tanoury, Jyoti Rao, Margarete Diaz-Cuadros, Arian Mansur, Erica Wagner, Claire Chardes, Vandana A Gupta, Pierre-Francois Lenne, Bianca H Habermann, Olivier Pourquie, Frank Schnorrer
Hingepoint emergence in mammalian spinal neurulation
Veerle de Goederen, Roman Vetter, Katie McDole, Dagmar Iber
Somite morphogenesis is required for axial blood vessel formation
Eric Paulissen, Nicholas J. Palmisano, Joshua Waxman, Benjamin L. Martin
Haemocytes are critical for Drosophila melanogaster post-embryonic development, independent of control of the microbiota
HN Stephenson, R Streeck, A Herzig
Tuberin levels during cellular differentiation in brain development
Bashaer Abu Khatir, Gordon Omar Davis, Mariam Sameem, Rutu Patel, Jackie Fong, Dorota Lubanska, Elizabeth Fidalgo da Silva, Lisa A. Porter
Amoeboid-like neuronal migration ensures correct horizontal cell layer formation in the developing vertebrate retina
Rana Amini, Raimund Schlüßler, Stephanie Möllmert, Archit Bhatnagar, Jochen Guck, Caren Norden
EXOSC10/Rrp6 is essential for the eight-cell embryo/morula transition
Fabrice G. Petit, Soazik P. Jamin, Pierre-Yves Kernanec, Emmanuelle Becker, Guillaume Halet, Michael Primig
Nephronectin-Integrin α8 signaling is required for proper migration of periocular neural crest cells during chick corneal development
Justin Ma, Lian Bi, James Spurlin, Peter Lwigale
Stretch-induced endogenous electric fields drive neural crest directed collective cell migration in vivo
Fernando Ferreira, Sofia Moreira, Elias H. Barriga
Pseudo-dynamic analysis of heart tube formation in the mouse reveals strong regional variability and early left-right asymmetry
Isaac Esteban, Patrick Schmidt, Susana Temiño, Leif Kobbelt, Miguel Torres
Self-organized tissue mechanics underlie embryonic regulation
Paolo Caldarelli, Alexander Chamolly, Olinda Alegria-Prévot, Jerome Gros, Francis Corson
Development and retinal remodeling in the brown anole lizard (Anolis sagrei)
Ashley M. Rasys, Shana H. Pau, Katherine E. Irwin, Sherry Luo, Hannah Q. Kim, M. Austin Wahle, Douglas B. Menke, James D. Lauderdale
A mechanochemical model recapitulates distinct vertebrate gastrulation modes
Mattia Serra, Guillermo Serrano Nájera, Manli Chuai, Vamsi Spandan, Cornelis J. Weijer, L. Mahadevan
TES-1/Tes protects junctional actin networks under tension from self-injury during epidermal morphogenesis in the C. elegans embryo
Allison M. Lynch, Bethany G. Lucas, Jonathan D. Winkelman, Sterling C.T. Martin, Samuel D. Block, Anjon Audhya, Margaret L. Gardel, Jeff Hardin
Fibroblast-derived HGF integrates muscle and nerve development during morphogenesis of the mammalian diaphragm
Elizabeth M. Sefton, Mirialys Gallardo, Claire E. Tobin, Mary P. Colasanto, Gabrielle Kardon
Actin capping protein regulates actomyosin contractility to maintain germline architecture in C. elegans
Shinjini Ray, Priti Agarwal, Ronen Zaidel-Bar
Mechanical Compression Creates a Quiescent Muscle Stem Cell Niche
Jiaxiang Tao, Mohammad Ikbal Choudhury, Debonil Maity, Taeki Kim, Sean X. Sun, Chen-Ming Fan
Lineage, Identity, and Fate of Distinct Progenitor Populations in the Embryonic Olfactory Epithelium
Elizabeth M Paronett, Corey A Bryan, Thomas M Maynard, Anthony-S. LaMantia
Double-layered two-directional somatopleural cell migration during chicken body wall development revealed with local fluorescent tissue labeling
Nobuyuki Sakamoto, Hirohiko Aoyama, Koji Ikegami
The Isl1/Shh/Wnt5a cascade controls the invasion of myoblasts by tuning the CXCL12/CXCR4 axis during tongue morphogenesis
Wei Zhang, Jiaojiao Yu, Guoquan Fu, Ruiqi Huang, Jianying Li, Huarong Huang, Jing Liu, Dongliang Yu, Lin Gan, Mengsheng Qiu, Zunyi Zhang, Feixue Li
The Ribb-osome: Ribbon boosts ribosomal protein gene expression to coordinate organ form and function
Rajprasad Loganathan, Daniel C. Levings, Ji Hoon Kim, Michael B. Wells, Hannah Chiu, Yifan Wu, Matthew Slattery, Deborah J. Andrew
Appropriate tension sensitivity of α-catenin ensures rounding morphogenesis of epithelial spheroids
Ryosuke Nishimura, Kagayaki Kato, Misako Saida, Yasuhiro Kamei, Masahiro Takeda, Hiromi Miyoshi, Yutaka Yamagata, Yu Amano, Shigenobu Yonemura
Toll-like receptor signalling via IRAK4 confers epithelial integrity and tightness through regulation of junctional tension
Jesse Peterson, Kinga Balogh Sivars, Ambra Bianco, Katja Röper
| Genes & genomes
Spatiotemporal mapping of gene expression landscapes and developmental trajectories during zebrafish embryogenesis
Chang Liu, Rui Li, Young Li, Xiumei Lin, Shuowen Wang, Qun Liu, Kaichen Zhao, Xueqian Yang, Xuyang Shi, Yuting Ma, Chenyu Pei, Hui Wang, Wendai Bao, Junhou Hui, Michael Arman Berberoglu, Sunil Kumar Sahu, Miguel A. Esteban, Kailong Ma, Guangyi Fan, Yuxiang Li, Shiping Liu, Ao Chen, Xun Xu, Zhiqiang Dong, Longqi Liu
High-resolution spatiotemporal transcriptomic maps of developing Drosophila embryos and larvae
Mingyue Wang, Qinan Hu, Tianhang Lv, Yuhang Wang, Qing Lan, Zhencheng Tu, Rong Xiang, Yanrong Wei, Kai Han, Yanru An, Mengnan Cheng, Jiangshan Xu, Miguel A. Esteban, Haorong Lu, Wangsheng Li, Shaofang Zhang, Ao Chen, Wei Chen, Yuxiang Li, Xiaoshan Wang, Xun Xu, Yuhui Hu, Longqi Liu
Single-Cell Analysis of Human Testis Aging, and Impact of Elevated Body Mass Index
Xichen Nie, Sarah K. Munyoki, Meena Sukhwani, Nina Schmid, Annika Missel, Benjamin R. Emery, Donor Connect, Jan-Bernd Stukenborg, Artur Mayerhofer, Kyle E. Orwig, Kenneth I. Aston, James M. Hotaling, Bradley R. Cairns, Jingtao Guo
Single cell RNA sequencing of the Strongylocentrotus purpuratus larva reveals the blueprint of major cell types and nervous system of a non-chordate deuterostome
Periklis Paganos, Danila Voronov, Jacob Musser, Detlev Arendt, Maria I. Arnone
Nuclear morphogenesis: forming a heterogeneous nucleus during embryogenesis
Albert Tsai, Justin Crocker
Distal regulation, silencers and a shared combinatorial syntax are hallmarks of animal embryogenesis
Paola Cornejo-Páramo, Kathrein Roper, Sandie M Degnan, Bernard M Degnan, Emily S Wong
Single-cell chromatin and gene-regulatory dynamics of mouse nephron progenitors
Sylvia Hilliard, Giovane Tortelote, Hongbing Liu, Chao-Hui Chen, Samir S. El-Dahr
Kdm6b confers Tfdp1 with the competence to activate p53 signalling in regulating palatogenesis
Tingwei Guo, Xia Han, Jinzhi He, Jifan Feng, Junjun Jing, Eva Janečková, Jie Lei, Thach-Vu Ho, Jian Xu, Yang Chai
STAG2 promotes the myelination transcriptional program in oligodendrocytes
Ningyan Cheng, Mohammed Kanchwala, Bret M. Evers, Chao Xing, Hongtao Yu
Methylome inheritance and enhancer dememorization reset an epigenetic gate safeguarding embryonic programs
Xiaotong Wu, Hongmei Zhang, Bingjie Zhang, Yu Zhang, Qiuyan Wang, Weimin Shen, Xi Wu, Lijia Li, Weikun Xia, Ryohei Nakamura, Bofeng Liu, Feng Liu, Hiroyuki Takeda, Anming Meng, Wei Xie
The transcriptional corepressor CTBP-1 acts with the SOX family transcription factor EGL-13 to maintain AIA interneuron cell identity in C. elegans
Josh Saul, Takashi Hirose, H. Robert Horvitz
seRNA PAM-1 regulates skeletal muscle satellite cell activation and aging through trans regulation of Timp2 expression synergistically with Ddx5
Karl Kam Hei So, Yile Huang, Suyang Zhang, Liangqiang He, Yuying Li, Xiaona Chen, Yu Zhao, Yingzhe Ding, Jiajian Zhou, Jie Yuan, Mai Har Sham, Hao Sun, Huating Wang
Transcript accumulation rates in the early C. elegans embryo
Priya Sivaramakrishnan, Cameron Watkins, John Isaac Murray
Transcriptomic, epigenetic and metabolic characterization of the pluripotency continuum in rabbit preimplantation embryos
Wilhelm Bouchereau, Luc Jouneau, Catherine Archilla, Irène Aksoy, Anaïs Moulin, Nathalie Daniel, Nathalie Peynot, Sophie Calderari, Thierry Joly, Murielle Godet, Yan Jaszczyszyn, Marine Pratlong, Dany Severac, Pierre Savatier, Véronique Duranthon, Marielle Afanassieff, Nathalie Beaujean
Epigenome priming dictates transcription response and white matter fate upon perinatal inflammation
Anne-Laure Schang, Juliette van Steenwinckel, Julia Lipecki, Charlotte Rich-Griffin, Kate Woolley-Allen, Nigel Dyer, Tifenn Le Charpentier, Patrick Schäfer, Bobbi Fleiss, Sascha Ott, Délara SabéRan-Djoneidi, Valérie Mezger, Pierre Gressens
Stepwise progression of β-selection during T cell development as revealed by histone deacetylation inhibition
Anchi S Chann, Mirren Charnley, Lucas Newton, Andrea Newbold, Patrick O Humbert, Ricky W Johnstone, Sarah M Russell
Excessive fetal growth affects HSC quiescence maintenance through epigenetic programming of EGR1 transcriptional network
Alexandre Pelletier, Arnaud Carrier, Yong Mei Zhao, Mickaёl Canouil, Mehdi Derhourhi, Emmanuelle Durand, Lionel Berberian-Ferrato, John Greally, Francine Hughes, Philippe Froguel, Amélie Bonnefond, Fabien Delahaye
Symmetric Inheritance of Histones H3 in Drosophila Male Germline Stem Cell Divisions
Julie Ray, Keith A. Maggert
Astrocyte-like glia-specific gene deathstar is crucial for normal development, adult locomotion and life span of male Drosophila
Hadi Najafi, Kyle Wong, Ammar Salkini, Woo Jae Kim
Promoter repression and 3D-restructuring resolves divergent developmental gene expression in TADs
Alessa R. Ringel, Quentin Szabo, Andrea M. Chiariello, Konrad Chudzik, Robert Schöpflin, Patricia Rothe, Alexandra L. Mattei, Tobias Zehnder, Dermot Harnett, Verena Laupert, Simona Bianco, Sara Hetzel, Mai Phan, Magdalena Schindler, Daniel Ibrahim, Christina Paliou, Andrea Esposito, Cesar A. Prada-Medina, Stefan Haas, Peter Giere, Martin Vingron, Lars Wittler, Alexander Meissner, Mario Nicodemi, Giacomo Cavalli, Frédéric Bantignies, Stefan Mundlos, Michael I. Robson
Dynamical modeling of the H3K27 epigenetic landscape in mouse embryonic stem cells
Kapil Newar, Eric Fanchon, Daniel Jost
Loss of Prm1 leads to defective chromatin protamination, impaired PRM2 processing, reduced sperm motility and subfertility in male mice
Gina Esther Merges, Julia Meier, Simon Schneider, Alexander Kruse, Andreas Christian Fröbius, Klaus Steger, Lena Arévalo, Hubert Schorle
R-loop mapping and characterization during Drosophila embryogenesis reveals developmental plasticity in R-loop signatures
Alex Munden, Mary Lauren Benton, John A Capra, Jared Nordman
Differential regulation of cranial and cardiac neural crest by Serum Response Factor
Colin J Dinsmore, Philippe Soriano
Maternal Ezh1/2 deficiency in oocyte delays H3K27me2/3 restoration and impairs epiblast development responsible for embryonic sub-lethality in mouse
Yinan Zhao, Dan Zhang, Mengying Liu, Yingpu Tian, Jinhua Lu, Shaorong Gao, Haibin Wang, Zhongxian Lu
Early embryonic heat shock induces long-term epigenetic memory by affecting the transition to zygotic independence
Lovisa Örkenby, Signe Skog, Helen Ekman, Unn Kugelberg, Rashmi Ramesh, Marie Roth, Daniel Natt, Anita Öst
Polycomb Repressive Complexes occupancy reveals PRC2-independent PRC1 critical role in the control of limb development
Claudia Gentile, Fanny Guerard-Millet, Rachael Paul, Alexandre Mayran, Marie Kmita
CircSry regulates spermatogenesis by enhancing γH2AX expression via sponging miR-138-5p
Yanze Song, Min Chen, Yingfan Zhang, Na Li, Min Chen, Miaomiao Qiao, Yuanwei Cao, Jian Chen, Fei Gao, Haoyi Wang
| Stem cells, regeneration & disease modelling
Stemness activity underlying whole brain regeneration in a basal chordate
Tal Gordon, Tal Zaquin, Mark Alec Kowarsky, Yotam Voskoboynik, Noam Hendin, Omri Wurtzel, Federico Caicci, Lucia Manni, Ayelet Voskoboynik, Noa Shenkar
In-vitro cellular reprogramming to model gonad development and its disorders
Nitzan Gonen, Caroline Eozenou, Richard Mitter, Andreia Bernardo, Almira Chervova, Emmanuel Frachon, Pierre-Henri Commere, Inas Mazen, Samy Gobaa, Kenneth McElreavey, Robin Lovell-Badge, Anu Bashamboo
Spatiotemporal transcriptome at single-cell resolution reveals key radial glial cell population in axolotl telencephalon development and regeneration
Xiaoyu Wei, Sulei Fu, Hanbo Li, Yang Liu, Shuai Wang, Weimin Feng, Yunzhi Yang, Xiawei Liu, Yan-Yun Zeng, Mengnan Cheng, Yiwei Lai, Xiaojie Qiu, Liang Wu, Nannan Zhang, Yujia Jiang, Jiangshan Xu, Xiaoshan Su, Cheng Peng, Lei Han, Wilson Pak-Kin Lou, Chuanyu Liu, Yue Yuan, Kailong Ma, Tao Yang, Xiangyu Pan, Shang Gao, Ao Chen, Miguel A. Esteban, Huanming Yang, Jian Wang, Guangyi Fan, Longqi Liu, Liang Chen, Xun Xu, Ji-Feng Fei, Ying Gu
The p53-p21 axis plays a central role in lymphatic homeostasis and disease
Rohan Mylavarapu, Molly R. Kulikauskas, Cathrin Dierkes, Nema Sobhani, Michelle Mangette, Jeffrey Finlon, Wanida Stevens, Farinaz Arbab, Neil F. Box, Mark Lovell, Ajit Muley, Carrie J. Shawber, Beth Tamburini, Friedemann Kiefer, Tamara Terzian
Single-cell Atlas Unveils Cellular Heterogeneity and Novel Markers in Human Neonatal and Adult Intervertebral Discs
Wensen Jiang, Juliane D. Glaeser, Khosrowdad Salehi, Giselle Kaneda, Pranav Mathkar, Anton Wagner, Ritchie Ho, Dmitriy Sheyn
Single-cell transcriptome analysis of embryonic and adult endothelial cells allows to rank the hemogenic potential of post-natal endothelium
Artem Adamov, Yasmin Natalia Serina Secanechia, Christophe Lancrin
Fetal programming by sodium saccharin and damage on male offspring reproductive
Alana Rezende Godoi, Vanessa Caroline Fioravante, Beatriz Melo Santos, Francisco Eduardo Martinez, Patricia Fernanda Felipe Pinheiro
RNAi screening of RING/U-box domain ubiquitin ligases identifies critical regulators of stem cells and tissue regeneration in planarians
John M. Allen, Madison Balagtas, Elizabeth Barajas, Carolina Cano Macip, Sarai Alvarez Zepeda, Ionit Iberkleid, Elizabeth M. Duncan, Ricardo M. Zayas
WNT/β-catenin dependant alteration of cortical neurogenesis in a human stem cell model of SETBP1 disorder
Lucia F. Cardo, Meng Li
An abundant myeloid progenitor shapes neonatal hematopoiesis of naked mole-rats
Stephan Emmrich, Alexandre Trapp, Andrei Seluanov, Vera Gorbunova
Dual modulation of phase-transitioning licenses the Bicc1 network of ciliopathy proteins to bind specific target mRNAs
Benjamin Rothé, Simon Fortier, Daniel B. Constam
Endoglin deficiency elicits hypoxia-driven congestive heart failure in zebrafish
Etienne Lelièvre, Charlotte Bureau, Yann Bordat, Maxence Frétaud, Christelle Langevin, Chris Jopling, Karima Kissa
Identifying a novel role for the master regulator Tal1 in the Endothelial to Hematopoietic Transition
Yasmin Natalia Serina Secanechia, Isabelle Bergiers, Matt Rogon, Christian Arnold, Nicolas Descostes, Stephanie Le, Natalia Lopez Anguita, Kerstin Ganter, Chrysi Kapsali, Lea Bouilleau, Aaron Gut, Auguste Uzuotaite, Ayshan Aliyeva, Judith Zaugg, Christophe Lancrin
Laminin switches terminal differentiation fate of human trophoblast stem cells under chemically defined culture conditions
Victoria Karakis, Thomas McDonald, Abigail Cordiner, Adam Mischler, Adriana San Miguel, Balaji M Rao
Dual TBX5-Lineage and MYL2 Reporter System For Identification of Left Ventricular Cardiomyocytes During Human Induced Pluripotent Stem Cell Differentiation
Francisco X. Galdos, Carissa Lee, Soah Lee, William Goodyer, Sharon Paige, Sidra Xu, Gabriela V. Escobar, Rasmus O. Bak, Matthew Porteus, Sean M. Wu
In Vivo Generation of Bone Marrow from Embryonic Stem Cells in Interspecies Chimeras
Bingqiang Wen, Guolun Wang, Enhong Li, Olena A. Kolesnichenko, Zhaowei Tu, Senad Divanovic, Tanya V. Kalin, Vladimir V. Kalinichenko
A kinase-dead Csf1r mutation associated with adult-onset leukoencephalopathy has a dominant-negative impact on CSF1R signaling
Jennifer Stables, Emma K. Green, Anuj Sehgal, Omkar Patkar, Sahar Keshvari, Isis Taylor, Maisie E. Ashcroft, Kathleen Grabert, Evi Wollscheid-Lengeling, Stefan Szymkowiak, Barry W. McColl, Antony Adamson, Neil E. Humphreys, Werner Mueller, Hana Starobova, Irina Vetter, Sepideh Kiani Shabestari, Matthew M. Blurton-Jones, Kim M. Summers, Katharine M. Irvine, Clare Pridans, David A. Hume
The regenerative response of cardiac interstitial cells
Laura Rolland, Alenca Harrington, Adele Faucherre, Girisaran Gangatharan, Laurent Gamba, Dany Severac, Marine Pratlong, Thomas Moore-Morris, Chris Jopling
Aldehyde dehydrogenase 3A1 deficiency leads to mitochondrial dysfunction and impacts salivary gland stem cell self-renewal, differentiation and survival
Vignesh Viswanathan, Hongbin Cao, Julie Saiki, Dadi Jiang, Aaron Mattingly, Dhanya K Nambiar, Joshua Bloomstein, Yang Li, Sizun Jiang, Manish Chamoli, Davud Sirjani, Michael Kaplan, F Christopher Holsinger, Rachel Liang, Zhiping Feng, Rie Von Eyben, Edward Lagory, Li Guan, Haowen Jiang, Jiangbin Ye, Garry P Nolan, Nicholas Denko, Sarah Knox, Daria Mochly Rosen, Quynh Thu Le
Systems-level analysis of transcriptome reorganization during liver regeneration
Manisri Porukala, P K Vinod
Patient-derived endometrial organoids from MRKH patients: Insight in disease causing pathways
Sara Y. Brucker, Thomas Hentrich, Julia M. Schulze-Hentrich, Martin Pietzsch, Noel Wajngarten, Anjali Ralhan Singh, Katharina Rall, André Koch
The number of Follicle Stem Cells in a Drosophila ovariole
Daniel Kalderon, David Melamed, Amy Reilein
Evolutionarily divergent mTOR remodels the translatome to drive rapid wound closure and regeneration
Olena Zhulyn, Hannah Dorothy Rosenblatt, Leila Shokat, Shizhong A Dai, Duygu Kuzuoglu-Öztürk, Zijian Zhang, Davide Ruggero, Kevan Shokat, Maria Barna
Aberrant induction of p19Arf-mediated cellular senescence contributes to neurodevelopmental defects
Muriel Rhinn, Irene Zapata-Bodalo, Annabelle Klein, Jean-Luc Plassat, Tania Knauer-Meyer, William M. Keyes
Tfap2b specifies an embryonic melanocyte stem cell that retains adult multi-fate potential
Alessandro Brombin, Daniel J. Simpson, Jana Travnickova, Hannah Brunsdon, Zhiqiang Zeng, Yuting Lu, Adelaide I.J. Young, Tamir Chandra, E. Elizabeth Patton
Endocardium-to-coronary artery differentiation during heart development and regeneration involves sequential roles of Bmp2 and Cxcl12/Cxcr4
Gaetano D’Amato, Ragini Phansalkar, Jeffrey A. Naftaly, Pamela E. Rios Coronado, Dale O. Cowley, Kelsey E. Quinn, Bikram Sharma, Kathleen M. Caron, Alessandra Vigilante, Kristy Red-Horse
Intracellular pH dynamics regulates intestinal stem cell fate
Diane L. Barber, Yi Liu, Efren Reyes, David Castillo-Azofeifa, Ophir D Klein, Todd Nystul
ACTN2 missense variant causes proteopathy in human iPSC-derived cardiomyocytes
Antonia T. L. Zech, Maksymilian Prondzynski, Sonia R. Singh, Ellen Orthey, Erda Alizoti, Josefine Busch, Alexandra Madsen, Charlotta S. Behrens, Giulia Mearini, Marc D. Lemoine, Elisabeth Krämer, Diogo Mosqueira, Sanamjeet Virdi, Daniela Indenbirken, Maren Depke, Manuela Gesell Salazar, Uwe Völker, Ingke Braren, William T. Pu, Thomas Eschenhagen, Elke Hammer, Saskia Schlossarek, Lucie Carrier
Hoxb5 reprograms murine multipotent blood progenitors into hematopoietic stem cell-like cells
Dehao Huang, Qianhao Zhao, Qitong Weng, Qi Zhang, Kaitao Wang, Lijuan Liu, Chengxiang Xia, Tongjie Wang, Jiapin Xiong, Xiaofei Liu, Yuxian Guan, Yang Geng, Fang Dong, Hui Cheng, Jinyong Wang, Mengyun Zhang, Fangxiao Hu
The regenerative response of cardiac interstitial cells
Laura Rolland, Alenca Harrington, Adèle Faucherre, Girisaran Gangatharan, Laurent Gamba, Dany Severac, Marine Pratlong, Thomas Moore-Morris, Chris Jopling
| Plant development
Interplay between positive and negative regulation by B3-type transcription factors is critical for the accurate expression of the ABA INSENSITIVE 4 gene
Alma Fabiola Hernández-Bernal, Elizabeth Cordoba, Mónica Santos Mendoza, Kenny Alejandra Agreda-Laguna, Alejandra Dagmara Rivera, Maritere Uriostegui-Arcos, Mario Zurita, Patricia León
Quantitative live-imaging of Aquilegia floral meristems reveals distinct patterns of floral organ initiation and cell-level dynamics of floral meristem termination
Ya Min, Stephanie J. Conway, Elena M. Kramer
A vacuolar hexose transport is required for xylem development in the inflorescence stem of Arabidopsis
Emilie Aubry, Beate Hoffmann, Françoise Vilaine, Françoise Gilard, Patrick A.W. Klemens, Florence Guérard, Bertrand Gakière, H. Ekkehard Neuhaus, Catherine Bellini, Sylvie Dinant, Rozenn Le Hir
OsMADS58 stabilizes gene regulatory circuits during rice stamen development
Liping Shen, Feng Tian, Zhukuan Cheng, Qiang Zhao, Qi Feng, Yan Zhao, Bin Han, Yuhan Fang, Yanan Lin, Rui Chen, Donghui Wang, Wenfeng Sun, Jiaqi Sun, Hongyun Zeng, Nan Yao, Ge Gao, Jingchu Luo, Zhihong Xu, Shunong Bai
A molecular framework for proximal secondary vein branching in the Arabidopsis thaliana embryo
Elizabeth Kastanaki, Noel Blanco-Touriñán, Alexis Sarazin, Alessandra Sturchler, Bojan Gujas, Antia Rodriguez-Villalon
Quantitative cell release from plant tissues for single-cell genomics
D. Blaine Marchant, Brad Nelms, Virginia Walbot
Sponging of glutamate at the outer plasma membrane surface reveals roles for glutamate in development
Vanessa Castro-Rodríguez, Thomas J. Kleist, Nicoline M. Gappel, Fatiha Atanjaoui, Sakiko Okumoto, Mackenzie Machado, Tom Denyer, Marja C. P. Timmermans, Wolf B. Frommer, Michael M. Wudick
Topological properties accurately predict cell division events and organization of Arabidopsis thaliana’s shoot apical meristem
Timon W. Matz, Yang Wang, Ritika Kulshreshtha, Arun Sampathkumar, Zoran Nikoloski
Local conjugation of auxin by the GH3 amido synthetases is required for normal development of roots and flowers in Arabidopsis
Ruipan Guo, Yun Hu, Yuki Aoi, Hayao Hira, Chennan Ge, Xinhua Dai, Hiro Kasahara, Yunde Zhao
PLETHORA-WOX5 interaction and subnuclear localisation control Arabidopsis root stem cell maintenance
Rebecca C. Burkart, Vivien I. Strotmann, Gwendolyn K. Kirschner, Abdullah Akinci, Laura Czempik, Anika Dolata, Alexis Maizel, Stefanie Weidtkamp-Peters, Yvonne Stahl
PHB3 Regulates Lateral Root Primordia Formation via NO-mediated Degradation of AUX/IAAs
Shuna Li, Qingqing Li, Xiao Tian, Lijun Mu, Meiling Ji, Xiaoping Wang, Na Li, Fei Liu, Jing Shu, Nigel M. Crawford, Yong Wang
SCARECROW maintains the stem cell niche in Arabidopsis root by ensuring telomere integrity
Bingxin Wang, Xiaowen Shi, Jingbo Gao, Rui Liao, Jing Fu, Juan Bai, Hongchang Cui
| Evo-devo
Reconstruction of distinct vertebrate gastrulation modes via modulation of key cell behaviours in the chick embryo
Manli Chuai, Guillermo Serrano Nájera, Mattia Serra, L. Mahadevan, Cornelis J. Weijer
The Daphnia carapace and the origin of novel structures
Heather S. Bruce, Nipam H. Patel
Glue genes are subjected to diverse selective forces during Drosophila development
Flora Borne, Rob J. Kulathinal, Virginie Courtier-Orgogozo
How development affects evolution
Mauricio González-Forero, Andy Gardner
Single-cell transcriptomics unveils xylem cell development and evolution
Chia-Chun Tung, Shang-Che Kuo, Chia-Ling Yang, Chia-En Huang, Jhong-He Yu, Ying-Hsuan Sun, Peng Shuai, Jung-Chen Su, Chuan Ku, Ying-Chung Jimmy Lin
Cnidarian hair cell development illuminates an ancient role for the class IV POU transcription factor in defining mechanoreceptor identity
Ethan Ozment, Arianna N. Tamvacakis, Jianhong Zhou, Pablo Yamild Rosiles-Loeza, Esteban Elías Escobar-Hernandez, Selene L. Fernandez-Valverde, Nagayasu Nakanishi
A mathematical framework for evo-devo dynamics
Mauricio González-Forero, Andy Gardner
Molecular Basis of Urostyle Development: Genes and Gene Regulation Underlying an Evolutionary Novelty
Gayani Senevirathne, Neil H. Shubin
The early embryonic transcriptome of a Hawaiian Drosophila picture-wing fly shows evidence of altered gene expression and novel gene evolution
Madeline Chenevert, Bronwyn Miller, Ahmad Karkoutli, Anna Rusnak, Susan Lott, Joel Atallah
Cephalopod Retinal Development Shows Vertebrate-like Mechanisms of Neurogenesis
Francesca Napoli, Christina M Daly, Stephanie Neal, Kyle J McCulloch, Alexandra Zaloga, Alicia Liu, Kristen M Koenig
Evolution of maternal and early zygotic transcript regulation across Drosophila
Charles Omura, Susan Lott
Cell Biology
Production of Offspring from Azoospermic Mice with Meiotic Failure: Precise Biparental Meiosis within Halved Oocytes
Narumi Ogonuki, Hirohisa Kyogoku, Toshiaki Hino, Yuki Osawa, Yasuhiro Fujiwara, Kimiko Inoue, Tetsuo Kunieda, Seiya Mizuno, Hiroyuki Tateno, Fumihiro Sugiyama, Tomoya Kitajima, Atsuo Ogura
Differential nuclear import sets the timing of protein access to the embryonic genome
Thao Nguyen, Eli Costa, Tim Deibert, Jose Reyes, Felix Keber, Michael Stadlmeier, Meera Gupta, Chirag K. Kumar, Amanda Amodeo, Jesse C. Gatlin, Martin Wühr
Intercellular alignment of apical-basal polarity coordinates tissue homeostasis and growth
Jinghua Gui, Yunxian Huang, Satu-Marja Myllymäki, Marja Mikkola, Osamu Shimmi
Live imaging of delamination in Drosophila shows that epithelial cell motility and invasiveness are independently regulated
Mikiko Inaki, Kenji Matsuno
Revisiting the role of beta-tubulin in Drosophila development: beta-tubulin60D is not an essential gene, and its novel Pin1 allele has a tissue-specific dominant-negative impact
Ramesh Kumar Krishnan, Naomi Halachmi, Raju Baskar, Bakhrat Anna, Adi Salzberg, Uri Abdu
Epidermal Stratification Requires Retromer-Mediated Desmoglein-1 Recycling
Marihan Hegazy, Jennifer L. Koetsier, Amber L. Huffine, Joshua A Broussard, Brendan M. Godsel, Lisa M. Godsel, Kathleen J. Green
Defining Cardiac Cell Populations and Relative Cellular Composition of the Early Fetal Human Heart
Jennifer M. Dewing, Vinay Saunders, Ita O’Kelly, David I. Wilson
Travelling wave and asymptotic analysis of a multiphase moving boundary model for engineered tissue growth
Jacob M. Jepson, Nabil T. Fadai, Reuben D. O’Dea
LGG-1/GABARAP lipidation is dispensable for autophagy and development in C .elegans
Romane Leboutet, Céline Largeau, Magali Prigent, Grégoire Quinet, Manuel S. Rodriguez, Marie-Hélène Cuif, Emmanuel Culetto, Christophe Lefebvre, Renaud Legouis
Clonal gametogenesis is triggered by intrinsic stimuli in the hybrid’s germ cells but is dependent on sex differentiation
Tomáš Tichopád, Roman Franěk, Marie Doležálková-Kaštánková, Dmitrij Dedukh, Anatolie Marta, Karel Halačka, Christoph Steinbach, Karel Janko, Martin Pšenička
Modelling
Arnold tongue entrainment reveals dynamical principles of the embryonic segmentation clock
Paul Gerald Layague Sanchez, Victoria Mochulska, Christian Mauffette Denis, Gregor Mönke, Takehito Tomita, Nobuko Tsuchida-Straeten, Yvonne Petersen, Katharina F. Sonnen, Paul François, Alexander Aulehla
Neutral competition within a long-lived population of symmetrically dividing cells shapes the clonal composition of cerebral organoids
Florian G. Pflug, Simon Haendeler, Christopher Esk, Dominik Lindenhofer, Jürgen A. Knoblich, Arndt von Haeseler
A computational modeling approach for predicting multicell patterns based on signaling-induced differential adhesion
Nikita Sivakumar, Helen V. Warner, Shayn M. Peirce, Matthew J. Lazzara
β-catenin and canonical Wnts in Hydra pattern formation: Insights from mathematical modelling into two distinct systems
Moritz Mercker, Alexey Kazarnikov, Anja Tursch, Stefanie Höger, Tobias Lengfeld, Suat Özbek, Thomas W Holstein, Anna Marciniak-Czochra
Precision of morphogen-driven tissue patterning during development is enhanced through contact-mediated cellular interactions
Chandrashekar Kuyyamudi, Shakti N. Menon, Sitabhra Sinha
Collective gradient sensing with limited positional information
Emiliano Perez Ipiña, Brian A. Camley
Morphology and high frequency bio-electric fields
Johann Summhammer
Collective Cell Movement in Cell-Scale Tension Gradient on Tissue Interface
Katsuyoshi Matsushita, Hidenori Hashimura, Hidekazu Kuwayama, Koichi Fujimoto
Curvature induces active velocity waves in rotating multicellular spheroids
Tom Brandstätter, David B. Brückner, Yu Long Han, Ricard Alert, Ming Guo, Chase P. Broedersz
Reviews
Analysis and visualization of spatial transcriptomic data
Boxiang Liu, Yanjun Li
Blastocoel morphogenesis: a biophysics perspective
Mathieu Le-Verge-Serandour, Hervé Turlier
Developmental Acquisition of p53 Functions
Sushil K. Jaiswal, Sonam Raj, Melvin L. DePamphilis
Comparative Functions of the Endogenous Neural Stem Cell Secretome Across Species through Neurodevelopment and Disease
Tyler Dause, Jiyeon Denninger, Bryon Smith, Elizabeth Kirby
Tools & Resources
Trap-TRAP, a versatile tool for tissue-specific translatomics in zebrafish
Jorge Corbacho, Estefanía Sanabria-Reinoso, Ana Fernández-Miñan, Juan R. Martínez-Morales
Vitrifying multiple embryos in different arrangements does not alter the cooling rate⋆
Timothy Ostler, Thomas E. Woolley, Karl Swann, Andrew Thomson, Helen Priddle, Giles Palmer, Katerina Kaouri
Highly efficient synthetic CRISPR RNA/Cas9-based mutagenesis for rapid cardiovascular phenotypic screening in F0 zebrafish
Rachael E. Quick, Luke D. Buck, Sweta Parab, Zane R. Tolbert, Ryota L. Matsuoka
Identification of fetal liver stromal subsets in spectral cytometry using the parameter autofluorescence
Marcia Mesquita Peixoto, Francisca Soares-da-Silva, Sandrine Schmutz, Marie-Pierre Mailhe, Sophie Novault, Ana Cumano, Cedric Ait-Mansour
A noval lightsheet scattering microscopy for long-term visualization of cell-ECM interaction
Xiangda Zhou, Renping Zhao, Archana K. Yanamandra, Carsten Kummerow, Markus Hoth, Bin Qu
Inference of cell state transitions and cell fate plasticity from single-cell with MARGARET
Kushagra Pandey, Hamim Zafar
Spatiotemporal transcriptomic atlas of mouse organogenesis using DNA nanoball patterned arrays
Ao Chen, Sha Liao, Mengnan Cheng, Kailong Ma, Liang Wu, Yiwei Lai, Xiaojie Qiu, Jin Yang, Wenjiao Li, Jiangshan Xu, Shijie Hao, Xin Wang, Huifang Lu, Xi Chen, Xing Liu, Xin Huang, Feng Lin, Zhao Li, Yan Hong, Defeng Fu, Yujia Jiang, Jian Peng, Shuai Liu, Mengzhe Shen, Chuanyu Liu, Quanshui Li, Yue Yuan, Huiwen Zheng, Zhifeng Wang, Zhaohui Wang, Xin Huang, Haitao Xiang, Lei Han, Baoming Qin, Pengcheng Guo, Pura Muñoz- Cánoves, Jean Paul Thiery, Qingfeng Wu, Fuxiang Zhao, Mei Li, Haoyan Kuang, Junhou Hui, Ou Wang, Haorong Lu, Bo Wang, Shiping Liu, Ming Ni, Wenwei Zhang, Feng Mu, Ye Yin, Huanming Yang, Michael Lisby, Richard J. Cornall, Jan Mulder, Mathias Uhlen, Miguel A. Esteban, Yuxiang Li, Longqi Liu, Xun Xu, Jian Wang
Mod3D: A Low-Cost, Flexible Modular System of Live-Cell Microscopy Chambers and Holders
C. Barba Bazan, S. Goss, C. Peng, N. Begeja, CE. Suart, K. Neuman, Ray Truant
Learned deconvolution using physics priors for structured light-sheet microscopy
Philip Wijesinghe, Stella Corsetti, Darren J.X. Chow, Shuzo Sakata, Kylie R. Dunning, Kishan Dholakia
Orthogonal CRISPR-Cas tools for genome editing, inhibition, and CRISPR recording in zebrafish embryos
Paige R. Takasugi, Shengzhou Wang, Kimberly T. Truong, Evan P. Drage, Sahar N. Kanishka, Marissa A. Higbee, Nathan Bamidele, Ogooluwa Ojelabi, Erik J. Sontheimer, James A. Gagnon
Deep-Learning Super-Resolution Microscopy Reveals Nanometer-Scale Intracellular Dynamics at the Millisecond Temporal Resolution
Rong Chen, Xiao Tang, Zeyu Shen, Yusheng Shen, Tiantian Li, Ji Wang, Binbin Cui, Yusong Guo, Shengwang Du, Shuhuai Yao
High-speed live cell interferometry for screening bioprinted organoids
Peyton J. Tebon, Bowen Wang, Alexander L. Markowitz, Graeme Murray, Huyen Thi Lam Nguyen, Nasrin Tavanaie, Thang L. Nguyen, Paul C. Boutros, Michael A. Teitell, Alice Soragni
Cell-ACDC: a user-friendly toolset embedding state-of-the-art neural networks for segmentation, tracking and cell cycle annotations of live-cell imaging data
Francesco Padovani, Benedikt Mairhörmann, Pascal Falter-Braun, Jette Lengefeld, Kurt M. Schmoller
A Cell Atlas of Microbe-Responsive Processes in the Zebrafish Intestine
Reegan J Willms, Lena Ocampo Jones, Jennifer C Hocking, Edan Foley
TEMPO: A system to sequentially label and genetically manipulate vertebrate cell lineages
Isabel Espinosa-Medina, Daniel Feliciano, Carla Belmonte-Mateos, Jorge Garcia-Marques, Benjamin Foster, Rosa Linda Miyares, Cristina Pujades, Minoru Koyama, Tzumin Lee
Anatomic development of the upper airway during the first five years of life: A three-dimensional imaging study
Ying Ji Chuang, Seong Jae Hwang, Kevin A. Buhr, Courtney A. Miller, Gregory. D. Avey, Brad H. Story, Houri K. Vorperian
Generating and testing the efficacy of transgenic Cas9 in Tribolium castaneum
Andrew C. Zelhof, Johnathan C Rylee, Alexandra Nin-Velez, Simpla Mahato, Kennedy J Helms, Michael J Wade, Gabriel E. Zentner
Single-cell profiling of transcriptome and histone modifications with EpiDamID
Franka J. Rang, Kim L. de Luca, Sandra S. de Vries, Christian Valdes-Quezada, Ellen Boele, Phong D. Nguyen, Isabel Guerreiro, Yuko Sato, Hiroshi Kimura, Jeroen Bakkers, Jop Kind
Development of an Ontology for an Integrated Image Analysis Platform to enable Global Sharing of Microscopy Imaging Data
Satoshi Kume, Hiroshi Masuya, Yosky Kataoka, Norio Kobayashi
SGEN: Single-cell Sequencing Graph Self-supervised Embedding Network
Ziyi Liu, Minghui Liao, Fulin luo, Bo Du
cellanneal: A User-Friendly Deconvolution Software for Omics Data
Lisa Buchauer, Shalev Itzkovitz
Research practice & education
The power of peer networking for improving STEM faculty job applications: a successful pilot program
Carlos M. Guardia, Erin Kane, Alison G. Tebo, Anna A.W.M. Sanders, Devrim Kaya, Kathleen E. Grogan
Preprints in motion: tracking changes between preprint posting and journal publication during a pandemic
Liam Brierley, Federico Nanni, Jessica K Polka, Gautam Dey, Máté Pálfy, Nicholas Fraser, Jonathon Alexis Coates
Keeping students connected and engaged in a wet-lab research experience during a time of social distancing via mobile devices and video conferencing software
Michel Shamoon-Pour, Caitlin J. Light, Megan Fegley
Open microscopy in the life sciences: Quo Vadis?
Johannes Hohlbein, Benedict Diederich, Barbora Marsikova, Emmanuel G. Reynaud, Seamus Holden, Wiebke Jahr, Robert Haase, Kirti Prakash
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