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Pluripotent Stem Cell Platform Post-Doctoral Research Associate (x2)

Posted by , on 14 November 2013

Closing Date: 15 March 2021

The Pluripotent Stem Cell Platform (PSCP) is a hub in the UK Regenerative Medicine Platform, a joint research council programme to tackle the critical challenges in developing new regenerative treatments (www.ukrmp.org.uk). PSCP is a multi-disciplinary collaboration focussed on the quality controlled manufacturing and differentiation of human pluripotent stem cells suitable for clinical applications (http://www.ukrmp.org.uk/hubs/cell-behaviour-differentiation-and-manufacturing/).

Two post-doctoral positions are available in a programme headed by Austin Smith and Ludovic Vallier at the Wellcome Trust-MRC Cambridge Stem Cell Institute (www.stemcells.cam). The research is centred on optimising the generation and expansion of human iPS cells and derivative foregut endoderm and neural progenitor stem cells. The main objective is to harness the basic biology of these progenitor cells for the development of new cell based therapy approaches.

Candidates should have at least 3 years experience with culture and characterisation of pluripotent stem cells and/or their differentiation products.

Applications are encouraged from candidates with an appreciation of cell production for clinical use and/or Good Manufacturing Practice are encouraged

Technical support will be available and access to a range of flow cytometry, imaging and qPCR instrumentation.

Posts are funded for two years.

Salary: £27,854 – £36,298

Once an offer of employment has been accepted, the successful candidate will be required to undergo a health assessment.

To apply, please visit our vacancies webpage: http://www.stemcells.cam.ac.uk/careers-study/vacancies/

Informal enquiries are also welcome via email to: cscrjobs@cscr.cam.ac.uk

Applications must be submitted by 17:00 on the closing date of Thursday 12th December 2013.

Interviews will be held towards the end of week commencing 16th December 2013.If you have not been invited for interview by 16th December 2013., you have not been successful on this occasion.

Please quote reference PS02164 on your application and in any correspondence about this vacancy.

The University values diversity and is committed to equality of opportunity.

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Cosy Science: science cafés in the pub

Posted by , on 14 November 2013

Cosy Science is a non profit organisation formed in 2012 at Cancer Research UK London Research Institute, by a group of young scientists: Olga Martins de Brito, Kinga Bercsenyi and Nathalie Schmieg. After few months the team expanded with the additions of Mario Ruiz, Alessandra Audia, Michael Parkinson and Mariana Campos.

 

Cosy Science Team: from left to right - Kinga Bercsenyi, Nathalie Schmieg, Mariana Campos, Alessandra Audia and Mario Ruiz
Cosy Science Team: from left to right – Kinga Bercsenyi, Nathalie Schmieg, Mariana Campos, Alessandra Audia and Mario Ruiz

Our main objective is to get the public more involved in science, with an emphasis on asking questions and discussing rather than sitting and quietly listening for an hour in a lecture theatre. What makes this different from other science cafés is that it is set in the friendly, comfortable environment of a pub to attract people from all backgrounds and to encourage them to ask questions.

Our first speaker was Nobel Prize laureate Sir Tim Hunt, who speaks at the Exmouth Arms, our first venue, about winning his Nobel Prize. The night was a huge success thanks to a large turnout of fellow scientists and friends but having a Nobel Prize winner as a first speaker also helped.

After this triumph, the Cosy Science team set about inviting leading scientists from a broad range of disciplines/scientific backgrounds such as Professor David Nutt on drug policy and the Professor Steve Miller on the chemical cosmos. Our Science café has now become a hugely popular regular event, held on the last Tuesday of every month.

With publicity from The Londonist and TimeOut, we have seen our numbers swell to 300 followers on Twitter, 500 likes on Facebook and more than 400 contact on our emailing lists. From such a large network, we generally struggle to fit everyone into our larger venue and the Cittie of Yorke (just round the corner on High Holborn) but we still see people coming back for more – regulars and newcomers alike.

Our speakers are invited to give a brief talk of around 30 minutes to introduce their field of research highlighting interesting facts and key aims of their research. Afterwards there is a little break in which the audience can play a game specially designed by us for the topic of the talk. During this pause we collect donations from the audience to allow us to continue our project. Later we open the discussion to the floor and that, in some cases, can last for over an hour.

The Company of Biologists and EMBO both liked the idea of the science café to attract the public to scientific talks and thanks to that we have sourced funding for several events and we were able to provide free food and drinks. This initiative helped us to attract more people to our events – not bad for an organization with humble beginnings from London Research Institute.

Our invited speakers are scientists who, frequently in their careers, speak to a very specific audience. However, Cosy Science aims to communicate science to a lay audience. Our main challenge is to make sure that our speakers are able to keep a clear and simple language, avoiding too much jargon.  In this way our audience can understand the talk, be captivated and curious about the subject. To ensure that this is the case we often meet with the speakers beforehand and keep in touch with them throughout their preparation to provide them with guidance when they need it. Imagine a group of PhD students helping a group leader with designing a talk and selling their topic to an audience without the use of any visual aids!

 

David Nutt speaks to the Cosy crowd in one of our events.
David Nutt speaks to the Cosy crowd in one of our events.

As PhD students we spend most of our day in the lab, doing experiments at the bench, surrounded by scientists that share our love for science. Cosy Science gives us the platform to share this passion with everyone who is open minded enough to take it! We believe that explaining one’s research to an audience that is not from that specific field makes it easier to step back from the day-to-day problems and see the bigger picture, question basic assumptions we might not even think of, and at last but not at least to think outside the box. Furthermore, as the general public funds our research, we strongly believe that they should be aware and understand the outcomes of their investment in us.

Our next event will take place on the 26th of November at 7pm and will be ‘Unlocking the Secrets Behind Regenerative Medicine’. The evening is funded by the British Council and will include free food and drinks. We invite you to come over: it’s going to be a very fascinating night in which a panel of scientists will help us to understand the immense potential of a stem cell research.

As a non-profit organisation we recently received a fellowship for outreach activities sponsored by EMBO. We are therefore planning to expand our activities and organise a kids’ version of the science café – a science club! Kids will have the opportunity to listen, see and touch science done by real scientist in a relaxed environment not called ‘School’. We aim to foster their interest in science, their creativity and their critical thinking.

And who knows? Maybe there is even more room to expand: a larger venue, renowned speakers or more frequent talks, not even talking about the idea of doing our own version of Science Show Off with PhD students, so if you have any suggestions, fell free to get in touch with us at cosciuk@gmail.com.

 

Alessandra Audia & Mariana Campos

 

 

Outreach logo new squareThis post is part of a series on science outreach. You can read the introduction to the series here and read other posts in this series here.

 

 

 

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Postdoctoral Research Fellow in Developmental Neurobiology

Posted by , on 13 November 2013

Closing Date: 15 March 2021

Postdoctoral Research Fellow in Developmental Neurobiology Excellent Opportunity for an experienced Postdoctoral Research Fellow to work in a world class Research Institute.

Queensland Brain Institute The Queensland Brain Institute (QBI) was established as a research institute of the University of Queensland in 2003. The Institute is now operating out of a new state-of-the-art facility and houses 31 Principal Investigators with strong international reputations. The QBI is one of the largest neuroscience institutes in the world dedicated to understanding the mechanisms underlying brain function.

Details of the current QBI interdisciplinary research programs can be found at http://www.qbi.uq.edu.au.

An exciting opportunity exists for an experienced Postdoctoral Research Fellow/ Research Fellow to join the Neural Migration Laboratory at the Queensland Brain Institute. The successful applicant will be responsible for conducting research into the role of guidance receptors in the development of the vertebrate brain using the mouse as the development model.

The person Applicants must possess a PhD in a relevant field and have a strong background in molecular and/or cell biology. Demonstrated ability to bring research to publication and the ability to collaborate successfully with international researchers will be highly regarded.

Remuneration This is a full-time, fixed term appointment for an initial period of up to 3 years (renewal subject to funding and performance) at Research Academic level A or B. The remuneration package will be in the range $72,443 – $77,764 p.a. (Level A), or $81,857 – $97,205 p.a (Level B), plus employer superannuation contributions of up to 17%. Level of appointment will be commensurate with qualifications, experience and academic achievements.

Enquiries Contact A/Prof Helen Cooper on h.cooper@uq.edu.au To submit an application got to http://www.seek.com.au/job/25540987. All applicants must supply the following documents: Cover Letter and Resume. Application closing date Sunday 9 December 2013 11:55pm E. Australia Standard Time

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1st joint meeting of the French Society for Developmental Biology (SFBD) and the network for Functional Studies on Model Organisms (EFOR)

Posted by , on 10 November 2013

Dear colleague,

We are pleased to announce the 1st joint meeting of the French Society for Developmental Biology (SFBD) and the network for Functional Studies on Model Organisms (EFOR), to be held at the FIAP Jean Monnet center, 75014 Paris, Feb. 10-12, 2014.

This symposium, which also stands as the annual meeting of the SFBD society and of the EFOR network, will bring together distinguished speakers around  two key developmental topics: « Cell plasticity and tissue homeostasis » and « Laterality »
 
The following speakers have confirmed their participation:

Cell Plasticity and Tissue Homeostasis:

   Andrea Brand (Univ. of Cambridge UK)

   Isabel Farinas (Univ. de Valencia, Spain)

   Uri Frank (Univ. of Ireland, Galway, Ireland)

   Cayetano Gonzalez (IRB Barcelona, Spain)

   Thomas Graf (CGR Barcelona, Spain)

   Maarten van Lohuizen (NKI Amsterdam, The Netherlands)

   Shahragim Tajbakhsh (Pasteur Institute, Paris)
 

Laterality:

   Christelle Jozet-Alves (UCBN Caen, France)

   Oliver Hobert (Columbia U., NYC, USA)

   Thierry Lepage (CNRS UPMC Villefranche sur Mer, France)

   Stéphane Noselli (IBV Nice, France)

   Frédérique Peronnet (LBD Paris, France)

   Myriam Roussigné (CBD Toulouse, France)

 

A significant time will be allocated to short talks selected from the submitted abstracts, and to poster sessions.

The number of participants will be limited to 200.

Organizing committee: Laure Bally-Cuif (CNRS Gif-sur-Yvette), Angela Giangrande (IGBMC Illkirch) and Myriam Roussigné (CBD Toulouse)

 

Information and registration: http://www.sfbd.fr/meeting2014/

 

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Conference report: Combio2013 Perth Australia

Posted by , on 8 November 2013

ComBio, the largest annual life sciences conference in Australasia, combines the annual meetings of the Australia & New Zealand Society for Cell and Developmental Biology (ANZSCDB), the Australian Society for Biochemistry and Molecular Biology (ASBMB), and the ANZ Society for Plant Biology (ANZSPB). The conference attracts around 1000 researchers, not only from Australia and New Zealand but worldwide. Due to its broad scope, this meeting provides an exceptional opportunity to expand your knowledge beyond one’s own field of research and to meet and netIMG_2088work with leading researchers from all over Australasia.

 

This years meeting was held at the Perth Conference and Exhibition Centre in Perth, Western Australia from the 29th September to the 3rd of October. The meeting covered a broad range of topics including developmental and cell biology, cell-cell signaling, gene regulation, structural biology and regenerative science.

 

There were several Plenary lectures from both local and invited overseas speakers on topics diverse as RNA metabolism, re-designing photosynthesis and the splicesome.  Prof. Philip Ingham (A*STAR Insititute of Molecular and Cell Biology Singapore) reflected on a quarter of a century of hedgehog signaling research, his research careers includes many pioneering studies in Drosophila and zebrafish identifying the role of hedgehog signaling components.

 

With multiple concurrent symposium it was often very hard to decide which talk to attend.  I’ve highlighted some of the talks I attended to give you a sense and a taste of the impressive scope of developmental biology research presented at the meeting.

 

2013 ANZSCDB President Professor Peter Currie (Monash University, Melbourne) discussed his group’s work studying muscle progenitor cell biology in muscle growth and regeneration using a zebrafish model.  To study this, they are using transgenic animals to follow old and new growth muscle fibres to determine the age of muscle and trace how muscle grows.

 

Dr Ian Smyth (also of Monash University in Melbourne) revealed some amazing 3D images showcases the their work using optical projection tomography and their own software (TreeSurveyor) to understand branching morphogenesis during development of the nephrons in the mouse kidney.  This technology allows for finer mapping of branch volumes, length and angles to not only study branching over time but also how disease states influence on branching morphogenesis and the final nephron number.

 

Dr Annemiek Beverdam heads a new group at the University of New South Wales in Sydney, studying the role of YAP proteins in stem cell proliferation in the mouse post-natal epidermis.  Skin cancer is a huge problem in Australia and New Zealand, with over 400,000 Australians being treated for skin cancer each year.   Her group is studying the role of the Hippo pathway in epidermis homeostasis and skin cancer.

 

There were several great talks on sex-biased gene expression, sex-differentiation and fertility.  Professor Jozef Gecz  (University of Adelaide) presented his group’s work investigating sex-differences and abnormal expression of genes in PCDH19-female limited epilepsy disorder.  I was honoured to present my own group’s work examining RNA pausing as a mechanism of sex-differential gene regulation during development of the mouse gonad and brain.  A/Prof Dagmar Wilhelm (Monash University) presented recently published work on sexually dimorphic expression of short and long ncRNAs and their likely roles in sex determination.  Professor Peter Koopman (Institute for Molecular Biosciences, University of Queensland, Brisbane) showcased the latest work from his laboratory on factors influencing the sex specific differentiation of foetal germ cells.  Professor Eileen McLaughlin (University of Newcastle, NSW) presented findings on the role of RNA binding proteins Musashi-1 and -2 as key regulators of germ cell development during spermatogenesis in Drosophila and vertebrates.

 

Prof. Alpha Yap presenting his ANZSCDB President's Medal plenary lecture
Prof. Alpha Yap presenting his ANZSCDB President’s Medal plenary lecture

As always, ComBio also incorporated the annual general meeting and awards presentation for the ANZSCDB. The highly prestigious ANZSCDB President’s Medal was awarded to Professor Alpha Yap from the Institute for Molecular Biosciences at the University of Queensland. Professor Yap’s laboratory studies the cellular mechanisms behind cadherin-morphogenesis and their role in epithelial organization, health and disease.  He presented new exciting cell biology studies aiming to understand how cadherins co-operate with the actin cytoskeleton and the factors that drive cell extrusion from an epithelial sheet.

 

 

The ANZSCDB Young Investigator Award was won by A/Prof Natasha Harvey  (Centre for Cancer Biology, University of Adelaide) for her work studying the development of the lymphatic system, which is not as well understood as the rest of cardiovascular system development.  She presented recent work aimed at unraveling the molecular mechanisms behind the role of an ubiquitin ligase protein, Nedd4, essential for the formation of the mouse lymphatic vascular system.

 

A/Prof Natasha Harvey receiving the ANZSCDB Young Investigator Award for 2013
A/Prof Natasha Harvey receiving the ANZSCDB Young Investigator Award for 2013

ASBMB Lemberg Lecture and Medal winner Professor Sharah Kumar (also of the Centre for Cancer Biology at the University of Adelaide) gave an overview of his work characterized a several developmentally regulated genes including Nedd genes (ubiquitin ligases) in neural and vascular development and overall animal  growth.  Mutations in these proteins produce specific developmental phenotypes, and data from his lab show that they are required for correct trafficking of cell surface proteins such as receptor proteins required for the IGF-1 signaling pathway. To further understand the molecular mechanisms of Nedd protein function, the Kumar group have extended their studies into the Xenopus oocyte system and Drosophila, making optimal use of the advantages these systems offer over mammalian models.

 

If you’re interested in attending Combio2014, to be held in Australia’s capital Canberra, information can be found at http://www.asbmb.org.au/combio2014/.

For more information on the activities of the ANZSCDB have a look at the Society’s Facebook page or follow the @ANZSCDB on Twitter.

Dr Megan Wilson (@DrMegsW)

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The Node at the joint meeting of the French Societies for Developmental Biology and for Genetics

Posted by , on 7 November 2013

Next week will see the first joint meeting of the French Society for Developmental Biology and the French Society for Genetics, taking place close to the beautiful Avignon in the South of France!

The Node will be there, so please say hello to Cat, our community manager, if you see her around! She would love to meet you and know what you think about the Node. If you don’t know what Cat looks like, don’t worry. She will be speaking briefly about the Company of Biologists and the Node at the end of the first morning session (see the programme here).

If you are not attending, we will try to give you a taste of the conference. We will be tweeting from the meeting if internet connection is available, and we will also blog about it afterwards. You can still register for the conference until Monday (the 11th of November).

 

Node in Avignon logo (no background- cropped)

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Pluripotent Stem Cell Platform Executive Manager

Posted by , on 7 November 2013

Closing Date: 15 March 2021

Salary: £37,382 – £47,314

Fixed-term: The funds for this post are available until 30 November 2017 in the first instance.

As part of the UK Regenerative Medicine Platform (UKRMP), three UK Research Councils; Biotechnology and Biological Sciences Research Council, Engineering and Physical Sciences Research Council and the Medical Research Council have invested £25m in research and equipment to support the development of regenerative medicine therapies for a range of applications.

The Pluripotent Stem Cell Hub has been awarded £4.5m to establish a collaboration which brings together researchers from industry and academia to develop the processes needed to take these cells from laboratory-based research to the commercial manufacture of safe, effective and reproducible products for use in regenerative medicine.  The Hub will work with the other strands of the UKRMP to tackle some of the critical challenges in developing new regenerative treatments from discoveries made in the lab (www.ukrmp.org.uk).

For exceptional candidates it may be possible to appoint up to the top of Grade 9 (£48,729-£53,233).  In addition, it may be possible to offer a supplement to the salary range stated for this role any such supplement would be awarded on the basis of a demonstrable history of exceptional achievement and is entirely at the discretion of the University

An exciting opportunity for a Project Manager who has held a senior management role in a complex environment and a proven track record in business/ bioindustry whilst empathising with academic ethos.

We are looking for a highly motivated individual to manage projects effectively according to industry best practice, determining and delivering to agreed scope, quality, budget and deadlines. The Project Manager will manage a number of projects concurrently and will maintain accurate project plans, work schedules, issue and risk logs to enable projects to be delivered successfully.

The successful applicant will be commercially astute, intellectually agile with excellent communication skills.

The successful applicant will be educated to at least degree level and have a further qualification (MSC, PhD or MBA).  You will be able to demonstrate your ability to build effective relationships with funders, Engage with experts worldwide, develop summary documents and reports, organisation meetings and associated administration, and work related communication.  Hands on experience of budgeting, grant applications and other administrative tasks in a research- led environment would be highly advantageous as would experience of working as part of a senior management team with budgetary responsibility and accountability for group and individual performance.

The role-holder will be a confident and articulate communicator and will possess a highly collaborative and inspirational leadership style with a track record of managing and developing multi-disciplinary teams as well as building relationships with external partners.

Based in central Cambridge, you must be willing to travel between the partner sites.

Once an offer of employment has been accepted, the successful candidate will be required to undergo a health assessment.

To apply, please visit our vacancies webpage: http://www.stemcells.cam.ac.uk/careers-study/vacancies/

Informal enquiries are also welcome via email to: cscrjobs@cscr.cam.ac.uk

Applications must be submitted by 17:00 on the closing date of Friday 6th December 2013.

Interviews will be held in the week commencing 16th December 2013. If you have not been invited for interview by 12th December 2013, you have not been successful on this occasion.

Please quote reference PS02099 on your application and in any correspondence about this vacancy.

The University values diversity and is committed to equality of opportunity.

The University has a responsibility to ensure that all employees are eligible to live and work in the UK.

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Two year position in Cell and Developmental Biology, Swarthmore College

Posted by , on 5 November 2013

Closing Date: 15 March 2021

 

swat

 

TWO-YEAR VISITING ASSISTANT PROFESSOR

CELL AND DEVELOPMENTAL BIOLOGY

Department of Biology, Swarthmore College

 

The Department of Biology at Swarthmore College invites applications for a two-year visiting assistant professor position for the 2014-15 and 2015-16 academic years. Teaching responsibilities include participation in a team-taught introductory biology course as well as teaching intermediate-level courses with weekly laboratories in cell biology (2014-15) and developmental biology (2015-16).  Additionally, there may be an opportunity to teach an advanced seminar-style course (with laboratory projects) in an area that is complementary to our existing curriculum.

 

Applicants should have a Ph.D., teaching experience, and a strong commitment to undergraduate education. The College provides laboratory space and funds to support student research and faculty travel.  The Biology Department is dedicated to educating and supporting a rich, diverse body of students and encourages candidates who will further advance the goals of fostering an inclusive community with diverse ideas and experiences.  All application materials (curriculum vitae, statements of teaching and research interests, and three letters of recommendation) should be submitted online at https://academicjobsonline.org/ajo/jobs/3578 by January 13th, 2014. For more information, please visit our website at www.swarthmore.edu/biology. Questions regarding this position should be addressed to the Biology Department chair, Amy Cheng Vollmer, at avollme1@swarthmore.edu or by calling 610-328-8044.

 

Swarthmore College is a highly selective liberal arts college, located in the suburbs of Philadelphia,whose mission combines academic rigor with social responsibility.  Swarthmore has a strong institutional commitment to inclusive excellence through diversity in its educational program and employment practices.  The College actively seeks and welcomes applications from candidates with exceptional qualifications, particularly those with demonstrable commitments to a more inclusive society and world.

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An interview with Benoit Bruneau

Posted by , on 5 November 2013

This interview first appeared in Development.

 

Benoit Bruneau is a developmental biologist based at the Gladstone Institutes in San Francisco. His lab studies the transcription factors and chromatin remodelling complexes that regulate cardiac organogenesis and differentiation, with the aim of uncovering the basis for congenital heart defects. Benoit has recently become an editor for Development, and we asked him about his research and career and discussed how social media can help scientific progress.

 

Benoit Bruneau photoWhen did you first become interested in developmental biology?

When I was in my third year of undergraduate studies at the University of Ottawa, I took a developmental biology course that had a research component. The university had an axolotl colony, so we did all sorts of classic experiments, such as grafting Spemann organisers. I totally fell in love with developmental biology. However, when I asked the teaching assistant what it took to become a developmental biologist he wasn’t very motivating. He said you had to spend 6 years in graduate school, then postdoc for a number of years, then find a job that doesn’t pay well and fight for grants; I shelved that idea and instead had thoughts of medical school. Then a plant genetics research project the following year got me interested in genetics, and I ended up doing a PhD in physiology, looking at heart gene expression.

Developmental biology took a back seat for several years, but during my PhD I found myself reading lots of developmental biology papers, as well as papers on transcriptional regulation. These got me thinking about how great it would be to understand how gene expression is regulated in development. When I was doing my postdoc with Jon and Christine Seidman they discovered that the gene encoding the T-box transcription factor TBX5 was the mutated gene in Holt-Oram syndrome, which includes congenital heart defects. They asked me whether I wanted to make the Tbx5 knockout mouse, model the disease and understand its function. Right there I saw the opportunity for putting together everything that I had always dreamed of doing in one project. I wasn’t in a developmental biology lab but it seemed like I was embarking on a project in that field, and I was fortunate to be surrounded by developmental biology labs, such as those run by Cliff Tabin, Norbert Perrimon and Connie Cepko. Simply by osmosis, by doing and talking constantly about developmental biology over the years, I immersed myself in it.

 

Why did you decide to focus your research on the heart?

My graduate work was on cardiac physiology, and I joined the Seidman lab so that I could make mouse models of cardiomyopathies. I always had an interest in the heart because of heart disease in the family. When I started out, one might have said that if I wanted to study heart disease I should have been studying heart attacks and atherosclerosis. Now, it is obvious that if we really want to fix hearts after a heart attack, we need to be able to build new heart cells, and that is what developmental biology is all about. This has actually become a reality, and I have been fortunate to participate in some of those discoveries.

 

What are the projects your lab is working on at the moment?

An important clinical motivation for our research is to understand the basis for congenital heart defects. I am really excited because we are finally able to do things in a way and on a scale that I had always dreamt of. We want to understand all the genomic switches and regulators that are involved in cardiac lineage determination and cardiac differentiation. We are taking a strategic approach by focusing on certain chromatin remodellers and DNA-binding transcription factors that we know are involved. We are also using new approaches to understand gene regulation during differentiation: for example, investigating the 3D interactions in the genome that shape or control these regulatory events.

We have really migrated from investigating a single gene at a time to addressing what is actually happening at the genome level: what is interacting with what, and how is that important? With the advent of new genomic and engineering technologies, such as TALENs (transcription activator-like effector nucleases) and CRISPRs (clustered regularly interspaced short palindromic repeats), the sky is the limit. For example, it took me 2 years of my postdoc to make the Tbx5 mutation, but a new postdoc in my lab generated the same mutation in 3 weeks. This means we can now address the function of regulatory elements not just in a heterologous context or in an artificial assay, but in a differentiating cell and, as we work on mouse, in a differentiating organism. Ultimately, the goal is to get a genomic blueprint of cardiac differentiation.

 

How stem cell research fits within developmental biology is a much-discussed topic. Your work is at the crossroads between these two fields: where do you stand in this discussion?

Yesterday someone referred to me as a ‘stem cell guy’, which is funny because we have really only published one and half stem cell-related papers! I’ve had this discussion with the lab recently: do we have a lab identity, and does it matter? Are we a stem cell lab now? Are we still a heart development lab? Or are we a transcription/chromatin lab that happens to be studying that molecular process in the developing heart? Our conclusion was that we are all of those things. We don’t need to pigeon-hole ourselves, because stem cells are a part of developmental biology. We want to understand progenitor allocation, morphogenesis, and how cells behave from the point of view of gene regulation. Our research topic allows us to be stem cell scientists, developmental biologists and chromatin biologists. I have had people join my lab with a background in developmental biology who are now doing primarily stem cell-based differentiation projects or chromatin-based projects, and vice versa. We incorporate all of their different skill sets and approaches, and I have fantastic people in the lab who can keep track of all the techniques and approaches. I hope we are uncategorisable!

 

Did you have a mentor or someone who inspired you during your career?

There are two people who have been major influences on my career. One of them is Janet Rossant and the other is Eric Olson. They have both been enthusiastic supporters of my science, which is really important. When you are starting out you don’t know if what you are doing is actually any good or if it will be appreciated, and I got really wonderful encouragement from both of them. I sought and got fantastic career advice from Janet very early on, when I was still a postdoc, and afterwards when I moved to Toronto. She has been a very good career mentor, and a generous colleague. Eric was an influence scientifically. I have got to know him over the years and the way he does things is tremendously inspiring. After I hear Eric give a talk I have two immediate reactions. The first is that I might as well quit science, because I will never be able to achieve something as impressive. But the stronger reaction is to be really motivated to go where I didn’t think I would be able to go, and go there without any fear.

 

How have you found your first months as a Development editor?

It is a tremendous honour. Development has always been one of my favourite journals and to be an editor among all the current and former editors who are the giants of developmental biology is humbling and a great honour. One of my goals is to try to help the journal increase its visibility and broaden its scope. In a way, the journal has already been doing this quite successfully with the recent Stem Cells and Regeneration section. I also want to encourage those colleagues in my field who are not contributing so much anymore to come back to the journal and those that are newer to consider sending their best stuff in. The history and the prestige behind Development is apparent to most but is not appreciated by many. That is what I would like to be able to bring to my role as editor.

 

Is there any particular type of paper, or particular topics, that you would like to see people submitting to Development?

I would like people who work on stem cell models of differentiation to think of the journal as a good place for their papers. I would also like to see more people who are doing very high quality molecular embryology to send their best work to the journal. There’s more competition now in the journal sphere, and I think Development has one of the most important places. However, we need to continue persuading people to send what they consider their best work to the journal. We will do that by accepting the best papers and by submitting our own best papers.

 

You are a very active user of Twitter, but many scientists see social media as a waste of time. Why do you use Twitter, and do you think scientists should be more active on social media?

Most scientists aren’t aware of the advantages of using Twitter. People wonder why it is interesting to know what someone had for lunch, or where they are going every minute, but that is not what Twitter is about. Twitter for me has been a really important source of information. I have been able to have real-time scientific discussions from my living room with people across the four corners of the world – mini conversations that I would not necessarily have otherwise had. I also get to know about some of the science that people are doing, especially in the genomics field, which has embraced Twitter as a means of communication. Of course, there are a lot of general views and amusing things that are nice to know about, but I see it more as a global science communication tool. You are also able to interact and get people’s opinions in a really immediate way. Sometimes people are overly frank on Twitter, which can be a bad thing; but it can also be nice: you really get to know what people are thinking, as opposed to just reading their work. I’m enthusiastic about Twitter, and I tell people about it, but I try not to beat them over the head with the gospel of Twitter. It’s not for everyone.

 

What would people be surprised to find out about you?

Despite being Canadian I didn’t live much of my childhood in Canada. My father was a diplomat, so I have lived in a number of different countries across the world. I was born in Tel Aviv, and I was baptised in the ancient monastery of Latrun, which only very rarely (every 50 years or so) has baptisms.

 

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In Development this week (Vol.140, Issue 22)

Posted by , on 5 November 2013

Here are the highlights from the current issue of Development:

 

Profiling the mammalian brain

F1.smallIn mammals, adult neurogenesis is highly restricted to the subventricular zone and to the subgranular zone (SGZ) of the hippocampal dentate gyrus. Is neurogenesis in these regions a recapitulation of developmental neural production, or does it involve distinct molecular and cellular processes? And are these processes conserved across mammalian species? To help answer these questions, Ed Lein and colleagues (p. 4633) have performed a detailed expression profiling analysis of the SGZ in adult mice and in developing and adult rhesus macaques. Their datasets suggest that the SGZ niche is highly heterogeneous, with enrichment for markers of various progenitor and differentiated cell types. These results also identify a large set of genes enriched in the SGZ of both species, many of which are also well known to be involved in developmental neurogenesis, suggesting a conserved programme operating during development and in adulthood. Together, these data provide a valuable resource for the community and highlight key factors for neurogenesis in both mice and monkeys.

 

No auxin gradient in the gametophyte

F1.small-1The female gametes of flowering plants are produced within a structure known as the gametophyte, which develops inside the carpel of the flower. The female gametophyte (FG) contains several cell types, and it has been proposed that their fate is specified, according to position, by an internal auxin gradient. Ueli Grossniklaus and co-workers (p. 4544) set out to model this proposed auxin gradient in silico, to understand better how it might regulate fate determination. Using physiologically plausible parameters, they found that only very shallow auxin gradients could be maintained, which were unlikely to allow robust patterning of the FG, suggesting that cell fate may not be defined by an auxin gradient. Indeed, more detailed examination of auxin patterns suggested that no such gradient exists in either Arabidopsis or maize. Instead, dynamic auxin signals could be observed in surrounding sporophytic tissues, and the authors propose that auxin may act indirectly in the sporophyte rather than directly in the FG to control FG cell fate.

 

Guiding mDA neurons

F1.small-2Although much is known about the specification and differentiation of midbrain dopaminergic (mDA) neurons, the mechanisms regulating their migration within the ventral midbrain (VM) are poorly understood. Migration of several other neuronal types is under the control of CXCL12/CXCR4 signalling, which has been shown to impact on migration, neuritogenesis and axonal pathfinding. Now, Ernest Arenas and colleagues (p. 4554) set out to investigate whether this chemokine pathway might also regulate mDA neuron migration. They find that Cxcl12 is expressed in the meninges surrounding the VM, whereas the Cxcr4 receptor is expressed in the mDA neurons and their precursors. Using both in vitro culture and in vivo approaches, the authors show that mDA neurons migrate towards the meningeal source of CXCL12, in a Cxcr4-dependent manner; importantly, in Cxcr4 mutant embryos, mDA neurons are misplaced. Moreover, neuritogenesis of these neurons is impaired when CXCL12/CXCR4 signalling is perturbed. Together, these results reveal a key role for this chemokine pathway in the regulation of mDA neuron migration.

 

Stem cells need escorts

F1.small-3Stem cell renewal in vivo often requires a specialised microenvironment, the stem cell niche. Niche cells provide self-renewal signals as well as structural and spatial cues to regulate stem cell maintenance and differentiation. Here, Pankaj Sahai-Hernandez and Todd Nystul (p. 4490) investigate the follicle stem cell (FSC) niche of the Drosophila ovary, providing evidence that the escort cells of the germarium – which surround germline cysts and support their development – are also key for FSC maintenance. Hedgehog (Hh) and Wingless (Wg) pathways are known to promote FSC self-renewal, and the distant terminal filament and cap cells were proposed to be the sources for these signals. However, the authors here show that escort cells are the essential source of Wg for FSC function, whereas Hh is produced from multiple somatic cell types – including escort cells – and acts on both FSCs and their progeny. Moreover, escort cells contact FSCs and likely provide a dynamic niche for their maintenance, revealing a new component of the niche and a new function for escort cells.

 

A new twist on Hox in the limb

F1.small-4Hox genes provide positional information along both the body’s anterior-posterior and the limb’s proximal-distal axes. Analysis of Hox gene function in the limb has primarily focussed on their roles in skeletal patterning. Now, Deneen Wellik and co-workers (p. 4574) find that Hox11 genes are most strongly expressed in the connective tissue of the developing mouse limb, rather than the skeletal elements. Moreover, Hoxa11/Hoxd11 mutants show severe defects in tendon and muscle patterning in addition to their well-characterised role in patterning the skeleton. All defects are confined to the zeugopod region where Hox11 is known to function. These phenotypes do not appear to be a consequence of skeletal malformation, as compound mutants with a single functional Hox11 allele show no defects in the skeleton, but display significant disruption of tendons and muscles. These results define a previously unappreciated function for Hox genes in the limb, and suggest that they may act regionally to coordinate development of the various tissues of the musculoskeletal system.

 

Egg arrest: a tale of two phosphatases

F1.small-5Before fertilization, animal eggs are maintained in cell cycle arrest, to prevent parthenogenetic activation. In vertebrates, this is achieved by MAPK- and Emi2-mediated inhibition of the anaphase promoting complex/cyclosome (APC/C). Sperm induce egg activation by calcium-dependent activation of CaMKII, which triggers the destruction of Emi2, activating APC/C. However, invertebrates do not possess an Emi2 homologue, raising the question of how egg activation is achieved in these species. On p. 4583, Alex McDougall and colleagues address this problem in ascidians, the closest relatives to the vertebrates. They find no role for CaMKII, but show that the phosphatase calcineurin (CN) is required, acting to promote APC/C activity. Moreover, basal activity of the phosphatase PP2A is also essential for full APC/C function and egg activation. As CN is involved in egg activation in Drosophila, and plays an auxiliary role in Xenopus, the authors suggest that this may represent the ancestral mechanism of egg activation, which has been lost in mammals and replaced by a CaMKII-dependent pathway.

 

PLUS…

The cell biology of mammalian fertilization

F2fert.largeDespite numerous studies, the molecular mechanisms underpinning the fertilization event in mammals remain largely unknown. However, as summarized here by Masuru Okabe, recent work using both gene-manipulated animals and in vitro studies has begun to elucidate essential sperm and egg molecules and to establish predictive models of successful fertilization. See the Primer on p. 4471

Left-right asymmetry: lessons from Cancún

F1Cancun.largeThe satellite symposium on ‘Making and breaking the left-right axis: implications of laterality in development and disease’ was held in June 2013 in conjunction with the 17th ISDB meeting in Cancún, Mexico. As summarized by Rebecca Burdine and Tamara Caspary, leaders in the field gathered at the symposium to discuss recent advances in understanding how left-right asymmetry is generated and utilized across the animal kingdom. See the Meeting Review on p. 4465

An interview with Benoit Bruneau

F1.small-6Benoit Bruneau is a developmental biologist based at the Gladstone Institutes in San Francisco. His lab studies the transcription factors and chromatin remodelling complexes that regulate cardiac organogenesis and differentiation, with the aim of uncovering the basis for congenital heart defects. Benoit has recently become an editor for Development, and we asked him about his research and career and discussed how social media can help scientific progress. See the Spotlight article on p. 4463

 

 

 

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Categories: Research