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The EMBO Meeting 2011 – Abstract submission and registration now open

Posted by , on 1 March 2011

10 – 13 September 2011, Vienna, Austria

Featuring more than 120 world-class scientific speakers, including: Richard Axel, Susan Lindquist, Eric Wieschaus and Giacomo Rizzolatti.

Three plenary lecture sessions: microbiology of infection, genome evolution and neuroscience.

21 concurrent sessions juxtaposing classical fields of research with those exploring new frontiers in molecular biology.

Daily poster sessions, career skills development workshops and much more.

EARLY REGISTRATION: 15 MAY 2011
ABSTRACT SUBMISSION: 22 MAY 2011

To see the whole programme, to submit abstracts and to register visit: www.the-embo-meeting.org

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Postdoctoral position in Regenerative Biology in Xenopus

Posted by , on 1 March 2011

Closing Date: 15 March 2021

A postdoctoral position is available in the Laboratory of Dr. Juan Larraín, at the Pontificia Universidad Católica de Chile, Santiago, Chile. The project involves the study of regenerative biology in Xenopus, and is developed under the Millenium Nucleus in Regeneratibe Biology (MINREB) and the Center for Aging and Regeneration (CARE). The Faculty is located at the center of Santiago, the capital city of Chile.

Applicants should have experience in Molecular Biology. The start date can be negotiated.

People interested can contact Dr. Juan Larraín at jlarrain@bio.puc.cl. Please include CV, publications and two (2) references. Applications are welcomed until April, 30.

More information can be obtained at www.minreb.cl and www.carechile.cl/home.php.

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Select a Development cover image from the Woods Hole course

Posted by , on 28 February 2011

Last summer you’ve been able to follow the experiences of a few of the students of the Woods Hole embryology course on the Node. You could tell from their stories that they learned different imaging techniques and studied a range of unique organisms.

The images produced in this course deserve a much wider audience, so Development has reserved some covers for images from the Woods Hole embryology course. The problem: there were far too many great images! We’ve made a selection, together with course co-director Nipam Patel, to narrow it down to the images that pass all the technical requirements for a cover, and now it’s down to you, the readers of the Node, to choose which ones you’d like to see as a journal cover.

There are four batches of images, so we’ll ask again a few more times, but here is the first group. Which of these images would you like to see on the cover of Development? Please vote in the poll below the images. (Click any image to see a larger version.) You can vote until March 8, 12:00 (noon) GMT

1. Mouth of an adult sea urchin feeding on a fragment of seaweed. This image was taken by Sarah A. Elliott (University of Utah) and Nobuo Ueda (University of Queensland).

2. Germband extended stage Drosophila embryo.  Confocal image (extended focus) showing the expression of Engrailed (orange) and Vasa (green).  Dividing cells are highlighted in pink (PhosphoH3), and remaining nuclei are blue (DAPI). This image was taken by James Tarver (University of Bristol).

3. Zebrafish embryo with cells of the gut highlighted in purple. This image was taken by Ann Grosse (University of Michigan).

4. Squid embryo visualized by a combination of brightfield and fluorescence imaging (DAPI in blue and phalloidin in red). This image was taken by Jennifer Hohagen (Georg-August-University of Goettingen).


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Categories: Images

Image contest deadline extended (and other image news)

Posted by , on 25 February 2011

Good news if you were rushing to get your images in in time for our image competition: we’ve extended the deadline to March 15. We’ve seen all sorts of unique interpretations of the theme “intersections” as applied to developmental biology among the submissions so far. Make sure to send yours in, too – you just got an extra two weeks for that!

Remember, the winner gets to choose their own work of TipArt. TipArt made use this lovely Node logo (you can see it in progress here), but they can do (almost) anything!

However, even though the contest voting round is pushed back a bit, we do have image voting coming up next week. Not for the Node’s image competition, but for a cover for Development. Students of the 2010 Woods Hole Embryology course have taken some beautiful photos in the course of their weeks there (some of which you have seen on the Node before), and it’s up to you – the readers of the Node – to select which ones you would like to see as a cover on Development. There will be a few of these cover voting rounds, and the first one will be on the Node on Monday February 28.

And in final image news, the Wellcome Image Awards 2011 were announced this week, and include many developmental biology images: Cell division in plants, mouse embryo visualisation, fish eye development, blastocysts, a developing mouse kidney, chromatin density in chromosomes, caterpillar prolegs – about half of the images in this year’s batch are related to developmental biology! We might hear a bit more from some of the winners soon.

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BSCB-BSDB Meeting 2011 – Early Bird Deadline Approaching

Posted by , on 24 February 2011

Don’t miss the early bird registration deadline for this year’s BSCB-BSDB meeting. To receive the discounted price make sure you’re registered by Friday 4th March.

The conference is the annual main meeting of the British Societies for Cell and Developmental Biology. This year it will be at Kent University in Canterbury from 27-30 April 2011. There’s a great line up of invited speakers, workshops and posters, along side the regular prize lectures and social events.

All the details at: www.bscb-bsdb-meetings.co.uk

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Primitive Streak – a fashion exhibit and website

Posted by , on 23 February 2011

In 1997, sisters Helen and Kate Storey collaborated on a project spanning their respective areas of expertise: fashion design and developmental biology.

The result was a highly acclaimed collection of dresses, designed by Helen Storey, that each represent a stage in early development. Recently, the Wellcome Trust renewed funding for the work, and Primitive Streak is once again on display. With the new tour, which started in Sheffield (UK) earlier this week, comes a brand new website as well.

Kate Storey, the scientist of the two sisters (and not unfamiliar to Node readers), has been involved with putting each dress in scientific context. The website features videos and images of the developmental processes corresponding to the pieces, so that you can compare exactly how much the Neurulation Dress really looks like a neural plate folding into the neural tube – somites included!

Photography © John Ross. Model: Connie Chiu. Image used with permission

For each step in the developmental process (and hence, each design) the site also provides a list of labs that are working on that particular stage of development, and an explanation of what happens when development goes wrong: The page for the Limb Formation Dress, for example, has a section on thalidomide, and links to the labs of Cheryll Tickle, Cliff Tabin, and Neil Vargison.

By putting each work in chronological order (starting with the 1000 Sperm Coat) and giving detailed information, the scientific section of the website provides a new perspective on the dresses for people unfamiliar with developmental biology. At the same time, it’s an introduction to fashion for an audience interested in biology: there is an obvious rationale behind the designs, and the scientific explanation and images really bring that home.

If you’re curious about the collaboration between Kate and Helen, the website’s introduction links to the diary they kept in 1997. Here are a few snippets:

“We talked and drew developing embryos for three hours. I tried to describe why these events were important. It was exhausting. Too much to take in for Helen. Hard for me to translate everything into layman’s terms.” – Kate’s diary April 28, 1997

“Kate came down to look at the collection’s progress. She seemed interested in my work environment, and in a joint interview made her first-ever verbal observation of my little world. She seemed pleasantly surprised at the similarities between how a lab is run and a workroom.” – Helen’s diary, August 12, 1997

Most of the pieces in Primitive Streak were designed when the project first launched in 1997, but thanks to an additional batch of funding received this year, a brand new Lung Formation Dress has joined the set. This dress represents various stages of lung development, from embryonic day 26 to fully-formed adult lungs. All dresses are currently on display in Sheffield’s Winter Garden, but if you’re not able to make it there, the website is a very good alternative.

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Postdoctoral Scholar position in pancreas development

Posted by , on 22 February 2011

Closing Date: 15 March 2021

A postdoctoral scholar position is currently available in the Lynn Lab, located at the University of British Columbia in beautiful Vancouver Canada, for a qualified individual interested in studying the regulation of pancreatic beta cell development. The project will use mouse and human systems to address how microRNAs regulate pancreatic progenitors and pancreatic beta cell differentiation.
The ideal applicant will possess doctorate in cell, developmental or stem cell biology; and a curiosity and passion for science.  You must also have a talent for independent research, which is supported by a strong publication record.
Please send by e-mail (francis at lynnlab dot com): a cover letter highlighting your past research accomplishments, future research interests and please outline why you would like to join our group. Please include your vita and copies of your highest impact publications (2 maximum).  Please mention you saw this ad on The Node.

web: http://www.betacell.ca

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In Development this week (Vol. 138, Issue 6)

Posted by , on 22 February 2011

Here are the research highlights from the current issue of Development:

Arteriovenous-specific regulation of angiogenesis

Endothelial cells (ECs) assume arterial- or venous-specific molecular characteristics at early stages of development. These lineage-specific molecular programmes subsequently instruct the development of the distinct vascular architectures of arteries and veins. Now, on p. 1173, Jau-Nian Chen and co-workers investigate the role that these early molecular programmes play in angiogenesis. Using the zebrafish caudal vein plexus as a model for venous-specific angiogenesis, they identify a new compound, aplexone, as an inhibitor of venous, but not arterial, angiogenesis. They show that aplexone targets the HMG-CoA reductase (HMGCR) pathway and that injection of mevalonate, a metabolic product of HMGCR, into zebrafish embryos reverses the effect of aplexone on venous angiogenesis. They also show that the inhibitory effect of aplexone on venous angiogenesis in zebrafish and human ECs is mediated by HMGCR-regulated membrane targeting of the small GTPase RhoA through protein prenylation. These and other findings indicate that angiogenesis is differentially regulated by the HMGCR pathway in an arteriovenous-specific manner in both zebrafish and human ECs.

miRNA hits Barx1 in the stomach

The spatiotemporal control of gene expression is crucially important during development, and microRNAs (miRNAs; short RNA molecules that silence complementary mRNA sequences) are thought to fine-tune the expression of developmentally important genes. Here, Ramesh Shivdasani and colleagues report that specific miRNAs influence mouse stomach organogenesis by regulating the expression of the mesenchymal transcription factor Barx1 (see p. 1081). Barx1 controls stomach morphogenesis and helps to specify the stomach-specific epithelium. However, Barx1 levels in the stomach decline sharply after epithelial specification. The researchers show that depletion of the miRNA-processing enzyme Dicer in cultured stomach mesenchymal cells increases Barx1 levels and that conditional Dicer gene deletion in mice disrupts stomach development. They identify miR-7a and miR-203 as regulators of Barx1 expression and show that these miRNAs repress Barx1 expression in the developing stomach by binding to the Barx1 3′ untranslated region. Barx1 downregulation by miRNAs in the mouse embryonic stomach might thus be an example of a widely used mechanism for modulating gene expression during development.

EGF signals muscle in to maintain intestinal stem cells

In high-turnover tissues, the precise control of stem cell proliferation is essential for tissue homeostasis. In Drosophila, the integrity of the midgut epithelium is maintained by intestinal stem cells (ISCs) but what regulates the proliferation of these cells? Benoît Biteau and Heinrich Jasper now report that EGF receptor (EGFR) signalling maintains the proliferative capacity of ISCs (see p. 1045). Using clonal analysis, RNAi knockdown and other experimental approaches, the researchers show that the EGF ligand Vein is expressed in the muscle surrounding the intestinal epithelium and that Vein provides a constitutive signal that activates ERK (extracellular signal-regulated kinase) in ISCs. Interestingly, the transcription factor FOS integrates this EGFR/ERK signal with signals mediated by the JNK (Jun N-terminal kinase) pathway in response to stress. The researchers suggest that the visceral muscle acts as a functional niche for ISCs and propose that FOS, by integrating the niche-derived permissive signal with stress-induced instructive signals, adjusts ISC proliferation to environmental conditions.

Niche-free progression of adult neural stem cells

Many tissues contain adult stem cells that could provide sources of cells for cell-based therapies. For example, adult neural stem cells (NSCs), which are found in brain regions such as the subependymal zone (SEZ), could be used to treat nervous system disorders. Little is known, however, about the intrinsic specification of adult NSCs or how dependent this specification is on the local niche. To understand the biology of NSCs better, Benedikt Berninger and co-workers have been using continuous live imaging to follow the cell divisions and lineage progression of cells isolated from the adult mouse SEZ (see p. 1057). They now report that SEZ cells cultured at low density without growth factors are primarily neurogenic, and that adult NSCs progress through stereotypic lineage trees consisting of asymmetric stem cell divisions, symmetric transit-amplifying divisions and final symmetric neurogenic divisions. The researchers conclude from these results that lineage progression from stem cell to neuron is cell-intrinsic and is independent of the local niche to a surprising degree.

Going with the flow: Pkd1l1 and Pkd2 set L-R axis

The internal organs of all vertebrates show distinct left-right (L-R) asymmetry. The earliest known event in the establishment of this asymmetry is a leftwards extracellular fluid flow at the embryonic node. This ‘nodal flow’, which is generated by the rotational movement of node cilia, activates asymmetric gene expression. But how is nodal flow detected? The two-cilia hypothesis proposes that, whereas motile cilia generate the flow, immobile node cilia detect nodal flow and respond by generating a left-sided Ca2+ signal. This signal generation is thought to be mediated by a complex consisting of the calcium channel polycystic kidney disease 2 (Pkd2) and an unknown sensor protein. In this issue, two papers further evaluate this hypothesis.

On p. 1131, Dominic Norris and colleagues identify the Pkd1-related locus Pkd1l1 as the missing Pkd2 partner and sensor protein in L-R patterning in mouse. Point mutants in either Pkd1l1 or Pkd2 fail to activate asymmetric gene expression at the node, they report, and develop similar L-R patterning defects. Cilia and node morphology and cilia motility are normal in both types of mutant, however, which suggests that Pkd1l1 and Pkd2 act downstream of nodal flow. Moreover, Pkd1l1 and Pkd2 localise to cilia and interact physically. Thus, the researchers propose, Pkd1l1 and Pkd2 form a cilia-specific stress-responsive channel in the node, a conclusion consistent with the two-cilia hypothesis.

On p. 1121, Hiroyuki Takeda and colleagues report that the medaka mutant abecobe is defective for L-R asymmetric gene expression but not for nodal flow, and identify the abecobe gene as Pkd1l1. They show that Pkd1l1 expression is confined to Kuppfer’s vesicle (KV; a medaka organ equivalent to the mouse node) and that, as in the mouse, Pkd1l1 interacts with and colocalises with Pkd2 in KV cilia. However, importantly, the researchers report that all KV cilia contain Pkd1l1 and Pkd2 and that all of the KV cilia are motile. These results necessitate reconsideration of the two-cilia model for L-R patterning and the researchers propose a new model in which cilia both generate nodal flow and interpret it through a nodal flow sensor that consists of Pkd1l1-Pkd2 complexes.

Plus…

Definitive hematopoietic stem cells (HSCs) give rise to all of the mature blood cell lineages in adults, and, as reviewed by Alexander Medvinsky and colleagues, recent advances have shed light on the embryonic origin of HSCs. See the Review Article on p. 1017

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The Cell: An Image Library

Posted by , on 22 February 2011

The Cell: An Image Library – a new, free, easy to use library of cell images.

Quail Developmental Atlas video

Visit: http://www.cellimagelibrary.org/

Post Images: http://www.cellimagelibrary.org/pages/contribute

Invite colleagues to LinkedIn group: http://www.linkedin.com/groupRegistration?gid=3733425&csrfToken=ajax%3A8893101144045091654

Like us on Facebook: http://www.facebook.com/pages/The-Cell-An-Image-Library/201662616514516

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News for Node readers and writers

Posted by , on 21 February 2011

Contest reminder
The deadline for the Node image contest is creeping closer. Have you sent in your submission yet? Have a look on our Facebook page to get a glimpse of the kind of thing you could win. (Though, presumably, you’re not going to commission the Node logo when you win, so it would look different…)

Share the Node with your colleagues
If you’re a fan of the Node, and would like to tell your department or lab about it, you can use our promotional powerpoint slide the next time you give a presentation.


(Download the ppt slide here.)

The text is editable, so you can highlight the topics that are most relevant to your audience. We think this might be especially interesting for those people who have written something on the Node about their research paper or international exchange, so that you can let the audience of your talk know where they can find out even more the next time you talk about your work.
You can also print the slide as a little poster and put it up in your coffee room, or contact us if you’d like some physical flyers for your institute’s common room or library.

Information for new users
To make the Node easier for new users, we’ve made an introduction page, which includes a little tour of the site, as well as a selection of posts from different categories.


Part of the new Introduction to the Node

Polls
If you’d like to include a poll in a post, you can use PollDaddy. You have to sign up there for a free account, and then you can link that to your Node account via the “polls” tab in the menu that you see when you’re logged in to the admin area of the site. Let us know if you need more help.

YouTube video embedding
If you’ve ever tried to embed a YouTube video in a Node post and it wouldn’t work, this has now been fixed! I’ve contacted everyone who explicitly told me they were having problems with this, but I bet there were more people who just never said anything. (It only got fixed because people spoke up, so do mention it whenever something appears to be broken.)

Small request for RSS subscribers
We’ve recently switched the main Node RSS feed to Feedburner, as well as some of the specific ones. If you subscribe to one of the selected content feeds listed on the feeds page (such as the one for jobs, or for stem cells only) could you please take a minute and follow the corresponding feedburner feed from that page instead? You’ll get the same content, but we’ll be able to see how popular the various feeds are, and find out what the most interesting parts of the Node are. If you were only subscribed to the general feed (with all the content), no action is necessary.

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Categories: News