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Creativity and Science Communication

Posted by , on 25 November 2025

Perhaps, you believe it is important to make your expertise accessible to people—to scientists in other fields or those who are not in touch with scientific research at all. Or maybe you find your research work lonely or monotonous at times (that happens!) and you would like to do some fun stuff while engaging with others. Maybe, at the end of the day, your research funder obliges you to do some public outreach. And so, you decide you want to do some science communication. That’s great!

By the virtue of knowledge you have accumulated through years of studying and from first-hand experience of professional scientific research, you definitely have something to offer. The question is… Where do you start?

Very possibly, the phrase “science communication” immediately evokes particular associations for you. News outlets. Science fairs. Video blogs. Podcasts. Each one of these focusses on popularising science, discussing science or advocating for certain scientific topics. And so, it may seem then, that doing science communication means simply jumping on board one of those existing projects of your liking – or – starting your own such project by emulating one of them. And that would be a good start.

Still, let’s hang on for a moment. Take a breath. Think. What part of science would you like to talk about? This is not a trivial question. Science has so very many faces! Firstly, there are dozens of scientific disciplines and questions. Of course, there is your own research. However, oftentimes it is so narrow that it is impossible to talk about it without creating around it some comprehensible context. And that’s the first creative challenge to be mentioned.

Whether we want it or not, the specialised language – or jargon – we use in research is a product of a particular professional culture, the academic research culture, and jargon emerged to effectively operate in that culture. It would be naive to expect that someone outside the research world would be able to understand you without some pre-emptive induction or translation. Novice science communicators are often chided for excessive use of scientific slang and jargon. But really, the use of jargon is just a symptom of a bigger – and quite a fun and creative – challenge: how to bring closer and, ideally, organically blend the language of a particular scientific question with our everyday language?

The challenge becomes even more apparent as you widen your circle of discussion topics. Oftentimes, there is only so much you can say about one specific research problem, so, very likely, you would need to get comfortable talking about science that is not your own research: perhaps, something lateral to it or, maybe, different altogether. (Which is, again, normal since a narrow research topic very rarely satisfies the breadth of our own curiosity). And that’s great! Because that’s when you can clearly see that knowing something through research does not automatically translate into being able to make it understandable. What really helps is a certain attention to the creative possibilities of language, or, rather, languag-es we know and use, as well as our willfulness to explore those possibilities in practice. By languages, I don’t mean French, Cantonese or Swahili (although, it is helpful to remind ourselves that science is done in many languages and can – and should – be communicated in many languages too). I rather mean the different expressive and informational resources we use to communicate. One such example is the language of visuals. Or physical movement. Or – language of feelings, emotions and experiences.

Talking about emotions seems to be a sort of taboo in science. Still, that doesn’t mean that scientists don’t go through emotions or don’t experience things. For example, I think of motivation, surprise, wonder, happiness, frustration, boredom, doubt, disappointment, pessimism. On top of this, experiences are not erasable from research and research is not erasable from emotions, even if the (perceived) mark of the profession seems to be to distance oneself from them. That’s because, aside from being many other things, emotions are also our cognitive resources. They are not infallible – but neither is (mythical) “cold” reasoning – yet they help us grasp a way forward – or sideways – when there is no ready-made formula, method or plan, or when the existing ones don’t seem to work.

How does this all relate to the topic of science communication? Well, in the lab, field or library, we spend hours and hours chasing the phenomena we find curious or puzzling, going further and further (and further (still further)) down the rabbit hole of specifications, caveats, ruling-out contingencies and searching for parallels and convergences. This is quite the journey! The journey is full of uncertainties and surprises, which may or may not fully fade away eventually (e.g., think of the problem of induction). And as all this happens, at the very same time, people of other professions are engaged in their own journeys. Just like you may not have a clue about what they are up to, they too may not have a clue about the journey you and your colleagues go through in science. That’s precisely where another creative challenge lies. Sometimes, communicating science is about making it relatable, experienceable”: understandable not merely as a commodified product, but as an activity, an experience, a journey.

To be clear, I’m not talking about a “hero’s journey”. Or about “constructing a compelling story.” As simple as it may sound, a story is propelled by experiences. But so is life. It is furnished with experiences of moving, staying, trying, avoiding trying, searching for and finding, or failing to find (huh?), or encountering the unexpected (wow!), not knowing what to do with, passing time, getting frustrated, forgetting (oh no!), connecting with, looking forward to and so on and so forth. We share experiences with each other as we find them entertaining, informative, useful, compelling, exciting, motivating, connecting, moving, and while sharing them, we call them “stories”. Navigating our way through first-hand or testimonial life experiences, we also use others’ stories to compose our own. Oftentimes we weave in metaphors or tropes to highlight this or that aspect. And, perhaps, this is how the gulf between the language of research and the language of everyday life can be traversed: via stories that sail back and forth and weave the two (three, five, seven) areas of experience together. To find – or to create – your way of doing this is a whole creative journey.

Some people may worry that storytelling can be dangerous: stories captivate, but they don’t contain an intrinsic filter for falsehoods. This is an enduring concern, but it is also somewhat undiscerning. On the one hand, it seems to imply that science – in practice or principle – is just about scientific facts and is devoid of imaginative leaps, tentative suggestions, discussions, unstructured reflections, detours and comebacks; always calm, clear, composed and certain. For all we know, this, in itself, is fictive, and a fiction not unproblematic. On the other hand, it is not clear what form of communication has intrinsic filters for falsehoods. Here one can start a long and tedious (or exciting) debate about forms of communication and metaphysics of truth, but the tentative answer I suggest is – none. Because, if we squint enough (enough, though), we may see stories as a form of technology; and, as with any piece of technology, it is the responsibility of the user – sensitive and attentive – to not mislead or deceive and, where necessary, to correct. Unfortunately, as Naomi Oreskes tells us, there are scientists who, from their position of authority, set forth rather harmful and deceptive stories. I imagine you, dear reader, are not interested in this path.

Still, it’s important to remember that science not only has many faces – but that those faces can look very different to different people. Perhaps, what you know as science – the insider’s view from the cockpit of your research domain – is your slice of science. You are surrounded by well-meaning researchers willing to positively contribute to society. However, when in 1972 the famous biophysicists Max Delbrück was asked whether pure science is to be seen as overall beneficial, he answered: “It depends”, and then added: “Clearly, the present state of the world – to which science has contributed much – leaves a great deal to be desired, and much to be feared”.

Today, this rings truer than ever. Partially because, pure or not, science heralds powerful technologies, and those, as we mentioned, do not always serve to the best ends. Which is why I personally like to remind myself that “science communication” is a shortening of a more accurate name: “public communication of science and technologies”. Science products – conceptual frameworks, technologies – often confront people where they are, sometimes unexpectedly, and it is not always a nice encounter. If this is what makes some people less trustful of some important scientific outputs, this distrust can hardly be remedied by filing more pamphlets with “correct” scientific answers. Which is why, the good practice of science communication often emphasises the importance of fostering connections, relations and dialogue.

And so we’re back at the creative challenges and the gulf between experiences and languages of science and everyday life. Only this time it is not just about the language and storytelling. It is also about meeting people where they are. Who are those people you want to connect with? What is your relation to them? Do you share the same concerns, worries or experiences? The same interests, cultural references or quirks? Same histories or aspirations? Where are they located? What is their preferred mode of communication? (And what if it’s not digital?) And how might they react to you, not just as a scientist, but as a fellow voyager through space and time and things and experiences? And as the traces of these questions evaporate into thin air, it is time to continue the halted action: to start exploring and experimenting with forms and formats of your science communication. Good luck!

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Catch up on Development presents… webinar on regeneration

Posted by , on 24 November 2025

Our November webinar featured two early-career researchers working on regeneration. Here, we share the talks from Stephanie Tsai (Massachusetts General Hospital) and Ben Cox (University of California, Davis).

Catch up on previous webinars and sign up to the Development presents… mailing list to learn about the upcoming webinars as they are announced.

Stephanie Tsai (Massachusetts General Hospital)

Talk and Q&A

Ben Cox (University of California, Davis)

Talk and Q&A

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Categories: Development presents..., Video

preLighters’ choice – October’s handpicked preprints

Posted by , on 12 November 2025

We’ve launched a new preLights initiative: each month, preLighters with expertise across developmental and stem cell biology nominate a few recent developmental and stem cell biology (and related) preprints they’re excited about and explain in a single paragraph why. Short, snappy picks from working scientists — a quick way to spot fresh ideas, bold methods and papers worth reading in full. These preprints can all be found in the October preprint list.

Want to join us at preLights? If you’re keen to gain some science writing experience and be part of a friendly, diverse and international community, consider joining preLights and writing a preprint highlight article.

October highlights

Deevitha Balasubramanian

Preprint:

Multiplexed embryo profiling links cellular state to zygotic genome activation in single cells
Max Hess, Marvin F. Wyss, Edlyn Wu, Joel Lüthi, Chiara Rebagliati, Nadine L. Vastenhouw, Darren Gilmour, Shayan Shamipour, Lucas Pelkmans

preLight:

Have you ever wanted to image dozens of your favorite proteins, together, in 3D, and at single-cell resolution?

This preprint describes the development of a 3D adaptation of the previously described iterative indirect immunofluorescence imaging (4i) technique and its application to early zebrafish embryos to explore the heterogeneity in the onset of zygotic genome activation (ZGA). 3D-4i enables multiplexed immunofluorescence and in toto imaging of whole-mount structures, allowing high-resolution and high-throughput visualization of proteins and is supported by a comprehensive image analysis pipeline. Using 3D-4i, the authors capture the levels of proteins like cell cycle regulators, histone modifications, pluripotency factors, and RNA polymerase II at single-cell resolution. This leads to many key findings, including a framework to infer cell cycle phase and accurately predict transcriptional output, revealing how multiple features act collectively to precisely modulate ZGA onset.

Dillan Saunders

Preprint:

A toolkit for testing membrane-localising tags across species
Irene Karapidaki, Mette Handberg-Thorsager, Tsuyoshi Momose, Hitoyoshi Yasuo, Grigory Genikhovich, Sarah Assaf, Clara Deleau, Ying Pang, Clayton Pavlich, Beke Lohmann, Maria Lorenza Rusciano, Mattia Stranges, Juliette Mathieu, Marie Zilliox, Kirill Ustyantsev, Bastien Salmon, Béryl Laplace-Builhé, Manon Koenig, Jeffrey J. Colgren, Maria Ina Arnone, Eugene Berezikov, Thibaut Brunet, Gregor Bucher, Pawel Burkhardt, Daniel J. Dickinson, Evelyn Houliston, Jan Huisken, Lucas Leclère, Michalis Averof

preLight:

All things bright and beautiful. 

Advances in technology have made detailed study of non-model organisms more feasible, yet there is always a challenge in applying existing techniques to new systems. The authors take a systemic approach to screening a varied set of membrane-localisation tags in the early embryos of a wide range of organisms. They identify several tags that display strong, membrane specific fluorophore localization in many species but highlight that no single tag is ubiquitously successful. This work is an open science project that combines the efforts of many labs to provide a useful community resource. Check this preprint out if you’re looking to label membranes in your species of interest!

Jawdat Sandakly

Preprint:

Post-translational Tuning of Human Cortical Progenitor Neuronal Output
Julien Pigeon, Tamina Dietl, Myriame Abou Mrad, Ludovico Rizzuti, Miguel V. Silva, Natasha Danda, Corentine Marie, Clarisse Brunet Avalos, Hayat Mokrani, Laila El Khattabi, Alexandre D. Baffet, Diogo S. Castro, Carlos Parras, Boyan Bonev, Bassem A. Hassan

preLight:

A novel role for PTMs in fine tuning neurogenesis.

While human brain development has long been linked to alterations in genomic sequence, the authors raise the question: do post translational modifications (PTMs) offer a complementary mechanism in shaping human brain evolution ? In particular,  they focus on Neurogenin 2 (NEUROG2), a master regulator of neural fate and neuronal identity specification, whose activity is dependent on PTMs such as phosphorylation. Through a combination of genome editing, high-throughput imaging, and single-cell multiomics, they investigate whether NEUROG2 has evolved species-specific functional plasticity in human radial glial cells (RGCs). They find that the human NEUROG2 regulates both deep and upper layer neuron production and controls the balance between proliferative and neurogenic divisions in RGCs via its phosphorylation at residue T149. This phosphorylation tunes AP-1 (JUN/FOS) driven gene regulatory networks in RGCs, enhancing neurogenic commitment and increasing upper-layer neuron production. Phospho-mutant NEUROG2 promotes premature chromatin opening at AP-1 binding sites, priming RGCs for differentiation without accelerating neuron maturation. Overall, their findings suggest that the evolutionary innovations in brain development do not solely rely on genetic changes but can also arise through modifications of conserved proteins.

Mansi Srivastava

Preprints:

A conserved logic for the development of cortical layering in tetrapods
Astrid Deryckere, Saket Choudhary, Connor Lynch, Lian Kirit V. P. Limperis, Pauline Affatato, Jamie Woych, Elias Gumnit, Alonso Ortega Gurrola, Rahul Satija, Christian Mayer, Maria Antonietta Tosches

&

An atlas of shark developing telencephalon reveals ancient origin of basal progenitors and Cajal-Retzius cells
Idoia Quintana-Urzainqui, Tobias Gerber, Phillip A. Oel, Leslie Pan, Nikolaos Papadopoulos, Z. Gülce Serka, Ana Verbanac, Maite Börsig, Dorinda Torres-Sabino, Isabel Clara Rollán-Delgado, Luca Santangeli, Henrik Kaessmann, Detlev Arendt

preLight:

Shark and Salamander – pioneers in building beautiful brains.

“Evolutionary change is often driven by changes in development.

Most of our understanding of brain development comes from studying the mouse (mammal). However, a tubular brain and backbone are the defining features of a subphylum – vertebrata. What if mammalian brain development actually combines elements found in the brain developmental programs of fish, salamanders, and birds, much like a musical genre blending influences from several styles?
These two papers dig into shark and salamander brains using a combination of single-cell RNA sequencing, spatial transcriptomics, birth-dating, lineage tracing, and computational approaches to learn the origin of brain development as we know it.

Combining these two papers is as satisfying as putting together a jigsaw puzzle.

  • The shark brain has field-level homology with that of the salamander and mouse.
  • Both sharks and salamanders have multipotent progenitors that give rise to intermediate progenitors: the driving force behind big brains.
  • The Cajal-Retzius cells marked their enigmatic presence in sharks.
  • In salamander, the molecular identity, layer position, and projection are functions of birthdate.

With this prologue, dive into the many observations these two papers make, and discuss where the point of difference arose in the vertebrates that made their brains look and behave differently. 

Manuel Lessi

Preprint:

IPSC-based modeling of resiliency in centenarians reveals longevity-specific signatures
Todd W. Dowrey, Samuel F. Cranston, Nicholas Skvir, Yvonne Lok, Payton Bock, Elizabeth K. Kharitonova, Elise MacDonald, Ella Zeldich, Christopher Gabel, Alexander Tyshkovskiy, Stefano Monti, Vadim N. Gladyshev, Paola Sebastiani, Thomas T. Perls, Stacy L. Andersen, George J. Murphy

preLight:

Giving new life to elderly cells reveals what makes them resilient to aging.

Understanding the molecular and cellular mechanisms that govern aging has been, and will likely remain, a central question for humanity. What better way to approach this challenge than by studying individuals who appear to defy canonical aging mechanisms? In this study, the authors generated pluripotent stem cells from a cohort of centenarians and differentiated them into excitatory cortical neurons. Molecular and cellular comparisons with neurons from non-centenarian individuals revealed that centenarian-derived neurons exhibit a distinct resilience signature, marked by enhanced synaptic integrity, calcium homeostasis, and energy-efficient metabolism at baseline. When challenged, these neurons demonstrated superior dynamic stress responses, in contrast to non-centenarian neurons, which showed chronic proteostatic stress activation and blunted responsiveness. Overall, this work highlights the versatility of the stem cell platform in uncovering molecular mechanisms that confer resilience to aging in neural systems. This represents a foundational resource for investigating the determinants of aging across diverse cell types and developmental contexts, leveraging the innate ability of stem cells to recapitulate key human developmental processes.

Sristilekha Nath

Preprint:

Tissue surface mechanics constrains proliferation-driven forces to guide mammalian body axis elongation
Marc Trani-Bustos, Ryan G Savill, Arthur Boutillon, Petr Pospíšil, Deniz Conkar, Claudia Froeb, Johannes R Soltwedel, Heidi L van de Wouw, Ellen M Sletten, Jesse V Veenvliet, Otger Campàs

preLight:

Decoding mammalian body axis elongation: a supracellular ‘actin cap’ in action.

Body axis elongation is fundamental to establishing a head-to-tail body plan in vertebrates, including mammals. Although the genetic and biochemical pathways involved are well studied, the physical forces that help shape the mammalian axis remain less understood. To investigate these mechanisms, the authors of this preprint used mouse and human stem-cell-derived gastruloids, an accessible model that bypasses the challenges of working with embryos in utero. By integrating a previously developed gastruloid analysis framework and oil droplet-based deformation measurements, the authors aimed to uncover the mechanical forces at play. Their findings show that randomly oriented cell divisions generate isotropic expansive forces throughout the gastruloid during the elongation period. However, a posteriorly enriched actin network, termed the ‘actin cap’, provides localized mechanical resistance, preventing tissues at the posterior domain from expanding laterally, thereby guiding the elongation of the body axis.  Apart from mouse and human gastruloids, mouse embryo explants display similar proliferation and actin patterns, supporting the idea that this actin cap–based mechanical constraint is a conserved and previously overlooked mechanism in mammalian axis elongation. 

Theodora M Stougiannou

Preprint #1:

Generation of parasympathetic neurons from hiPSC that reproduce the electrophysiological properties of native neurons and modulate the activity of hiPSC-atrial cardiomyocytes
Alison M. Thomas, Isabella Noelle Chiong, Joana F Neves, Andrew Tinker, Franziska Denk,  Laura Fedele

preLight:

What if we could use patient cells to generate neurons that can replace dysfunctional native cells and tackle diseases characterised by the aberration of atrial electromechanical activity, namely atrial fibrillation? This is the question the authors of this manuscript in preprint answer, a detailed protocol for the derivation of parasympathetic neurons from human induced pluripotent stem cells (hiPSC). The described protocol includes several useful features, including the lack of batch-testing for growth factors as well as the integration of electrophysiological and functional assessment testing to specifically identify the presence of parasympathetic neurons. The authors also describe cellular features the user should look out for, to ensure proper progression through the protocol steps, including the presence of smooth spheroids during the Embryoid bodies stage and the presence of neuronal-like projections during the neuronal differentiation stage, the expression of specified markers of autonomic (ASCL1, PHOX2B) and parasympathetic (CHAT, VACHT) populations and markers of autonomic neuron development (ISL1). The protocol also includes troubleshooting sections, which is sure to help new users make the most of it.

Preprint #2:

ETV2 mediated differentiation of human pluripotent stem cells results in functional endothelial cells for engineering advanced vascularized microphysiological models
Shun Zhang, Zhengpeng Wan, Lei Wang, Caihong Wu, Junkai Zhang, Sarah Spitz, Xun Wang, Marie A. Floryan, Mark F Coughlin, Francesca M. Pramotton, Liling Xu, Ron Weiss, Roger D. Kamm

preLight:

Water must flow, but will blood in in vitro models do the same? In this study, the authors generate endothelial cells (EC) derived from human induced pluripotent stem cells (hiPSC); efficiency of hiPSC-derived EC generation is enhanced via overexpression of ETV2, a factor involved in vascular and cardiac development. In short, expression of ETV2 is induced in the hiPSC lines used; these are then subjected to differentiation protocols that will eventually generate EC. In vitro, these same cell lines can self-assemble into stable and lumenized microvascular networks (MVN) on the surface of microfludic chips; more importantly, however, no such success in vascular formation has been observed in lines subjected to the conventional differentiation models, highlighting the importance of growth factor overexpression in pluripotent source populations. This study provides an answer to the problem of organoid vascularization and can be applied in models examining tumor vascularization as well as models evaluating the blood brain barrier (BBB).

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Categories: Highlights, News, Research, Resources

October in preprints

Posted by , on 12 November 2025

Welcome to our monthly trawl for developmental and stem cell biology (and related) preprints.

The preprints this month are hosted on bioRxiv – use these links below to get to the section you want:

Developmental biology

Cell Biology

Modelling

Tools & Resources

Research practice and education

Spotted a preprint in this list that you love? If you’re keen to gain some science writing experience and be part of a friendly, diverse and international community, consider joining preLights and writing a preprint highlight article.

Note: A group of preLighters, with expertise across developmental and stem cell biology, have highlighted (in orange) their favourite preprints of this month. Check out the accompanying post to learn why they picked these articles.

Developmental biology

| Patterning & signalling

Morphogen gradients applied basally to human embryonic stem cells to control and dissect tissue patterning
Tom Wyatt, Mingfeng Qiu, Julie Stoufflet, Hassan Omais, Gabriel Thon, Sara Bonavia, Pascal Hersen, Vincent Hakim, Benoit Sorre

Planar cell polarity aligns epithelial migration to coordinate tissue architecture and functional zonation
Rebecca F. Lee, Dami Oluwatade, Kaelyn Sumigray

Hippo signaling differentially regulates distal progenitor subpopulations and their transitional states to construct the mammalian lungs
Kuan Zhang, Madhuri Basak, Youssef Zaher, Erica Yao, Shao-An Wang, Thin Aung, Pao-Tien Chuang

Post-translational Tuning of Human Cortical Progenitor Neuronal Output
Julien Pigeon, Tamina Dietl, Myriame Abou Mrad, Ludovico Rizzuti, Miguel V. Silva, Natasha Danda, Corentine Marie, Clarisse Brunet Avalos, Hayat Mokrani, Laila El Khattabi, Alexandre D. Baffet, Diogo S. Castro, Carlos Parras, Boyan Bonev, Bassem A. Hassan

Temporal control of axonal floor plate crossing through a combination of incoherent feedforward and feedback loops of gene regulatory network regulating Robo3 expression
Reut Sudakevitz-Merzbach, Madhuri Majumder, Gerard Elberg, Marah Bakhtan, Dina Rekler, Sophie Khazanov, Benjamin J. Wheaton, Nissim Ben-Arie, Gilgi Friedlander, Chaya Kalcheim, Sara Ivy Wilson, Alexander Jaworski, Miri Adler, Avihu Klar

Cell-supracellular structural relations solve the French Flag Problem without graded molecular control
Clint S. Ko, Ruonan Chen, Nina T. Magid, Katharine Courtemanche, Pearson W. Miller, Alan R. Rodrigues, Amy E. Shyer

Axial Rotation Comprises Concurrent Twisting and Bending, Each Differentially Regulated by TGF-β Signaling
Yuki S. Kogure, Satoru Okuda, Kotaro Oka, Kohji Hotta

Mechanical control of histone serotonylation initiates neural crest migration in vivo
Joana E. Saraiva, Artemis G. Korovesi, Xiaoran Wei, Jaime A. Espina, Miguel Ribeiro, Ian Maze, Elias H. Barriga

Tbx genes influence early gene expression and photoreceptor patterning in the chick retina
Monika Ayten, Heer N.V. Joisher, Constance Cepko

From Ayten et al. This image is made available under a CC-BY 4.0 International license.

Simplified In Vitro Generation of Human Gastruloids for Modelling Early Development
Takuya Azami, E. Elizabeth Patton, Jennifer Nichols

A human arteriovenous differentiation roadmap reveals vein developmental mechanisms and vascular effects of viruses
Lay Teng Ang, Sherry Li Zheng, Kevin J. Liu, Anastasiia Masaltseva, June Winters, Isabel von Creytz, Sawan K. Jha, Qingqing Yin, Crystal Qian, Xiaochen Xiong, Amir Dailamy, Ellie Xi, Juan C. Alcocer, Daniel W. Sorensen, Richard She, Karina Smolyar, Dorota Szumska, Svanhild Nornes, Renata M. Martin, Benjamin J. Lesch, Nicole K. Restrepo, Wenfei Sun, Jonathan S. Weissman, Heiko Lickert, Matthew P. Porteus, Mark A. Skylar-Scott, Christian Mosimann, Saulius Sumanas, Sarah De Val, Joseph B. Prescott, Kristy Red-Horse, Kyle M. Loh

Deciphering the Interaction Between Dvl2 and Profilin2: Effector Molecules of Non-Canonical Wnt Signaling
Saikat Das, Shubham Das, Sankar Maiti

Regulation of Hippo signaling by Atrophin in the developing Drosophila wing
Deimante Mikalauskaite, Cordelia Rauskolb, Tom Lehan, Srividya Venkatramanan, Lilia Carnes, Kenneth D. Irvine

From Mikalauskaite et al. This image is made available under a CC-BY 4.0 International license.

Acvr2b receptors transduce all BMP signaling in the zebrafish gastrula and restrict Fibrodysplasia Ossificans Progressiva ACVR1-R206H signaling in a dose-dependent manner
Jeet H. Patel, Benjamin Tajer, Jira White, Finn Warrick, Mary C. Mullins

Differential usage of two, distinct DNA-binding domains regulates tissue-specific occupancy of the pioneer factor Zelda
Eliana F. Torres-Zelada, Hideyuki Komori, Hsiao-Yun Liu, Elizabeth D. Larson, Ally W.H. Yang, Zoe A. Fitzpatrick, Timothy R. Hughes, Christine A. Rushlow, Cheng-Yu Lee, Melissa M. Harrison

Dynamic and non-uniform expression of key transcription factors provides novel insights into the emergence of neural crest cells at the neural plate border
Andrew Montequin, Carole LaBonne

| Morphogenesis & mechanics

Motility-Driven Viscoelastic Control of Tissue Morphology in Presomitic Mesoderm
Sahil Islam, Mohd. Suhail Rizvi, Anupam Gupta

Tissue surface mechanics constrains proliferation-driven forces to guide mammalian body axis elongation
Marc Trani-Bustos, Ryan G Savill, Arthur Boutillon, Petr Pospíšil, Deniz Conkar, Claudia Froeb, Johannes R Soltwedel, Heidi L van de Wouw, Ellen M Sletten, Jesse V Veenvliet, Otger Campàs

From Trani-Bustos et al. This image is made available under a CC-BY-NC 4.0 International license.

Dorsal forerunner cells transmit epiboly forces to extend the zebrafish notochord
Christopher Small, Margot Kossmann Williams

Sulfatase modifying factors control the timing of zebrafish convergence and extension morphogenesis
Ailen Soledad Cervino, Amrita Basu, Ryan J. Weiss, Gursimran Kaur Bajwa, Rubén Marín Juez, Sandra Grimm, Cristian Coarfa, Margot Kossmann Williams

Tissue mechanics and systemic signaling safeguard epithelial tissue against spindle misorientation
Floris Bosveld, Baptiste Tesson, Eric van Leen, Sam Amirebrahimi, Raphael Thinat, Yohanns Bellaiche

Characterization of zebrafish nucleus pulposus in development and aging: A fish model for probing human intervertebral disc degeneration and regeneration
Jong-Su Park, Dhivyaa Rajasundaram, Diya Patel, Zachary W. Rachfal, Kyler Hoebe-Janssen, Brian R. Cabana, Katherine A. Davoli, Kira Lathrop, Gwendolyn A. Sowa, Nam V. Vo, Xiangyun Wei

MYRF is Essential for Epicardial Development
Elise V. Stanley, Chao Gao, Jason R. McCarthy, Maria I. Kontaridis, Tongbin Wu

Increased tissue tension caused by depletion of CLDN3 in the non-neural ectoderm causes neural fold fusion defects in chick embryos
Elizabeth-Ann Legere, Marie Dumont, Yojiro Yamanaka, Gabriel L. Galea, Aimee K. Ryan

Automated cell naming reveals reproducible and variable features of ascidian embryogenesis
Kilian Biasuz, Haydar Jammoul, Benjamin Gallean, Yanis Asloudj, Julien Laussu, Patrick Lemaire, Grégoire Malandain

Tetraploid Caenorhabditis elegans embryos exhibit enhanced tolerance to osmotic stress
Yuiko Oyama, Misako Ohama, Namu Yamada, Nozomi Suzuki, Kenji Kimura, Yuki Hara

CSF1R+ macrophage and osteoclast depletion impairs neural crest proliferation and craniofacial morphogenesis
Felix Ma, Rose Ru Jing Zhou, Matthew Rosin, Iris Zhou, Sabrina Ownsworth, Rouzbeh Ostadsharif Memar, Vincent B. Wong, Jessica M. Rosin

Induction of menstruation in mice reveals the regulation of menstrual shedding
Çağrı Çevrim, Nicholas J. Hilgert, Aellah M. Kaage, Andrew J.C. Russell, Allison E. Goldstein, Claire J. Ang, Jaina L.R. Gable, Laura E. Bagamery, Ana Breznik, Daniela J. Di Bella, Mustafa Talay, Jingyu Peng, Kathleen E. O’Neill, Fei Chen, Sean R. Eddy, Kara L. McKinley

Species-specific basal fluidization shapes early forebrain development
Shuting Xu, Guanlin Li, Michaela Wilsch-Bräuninger, Vikas Trivedi, Otger Campàs, Miki Ebisuya

Reciprocal E-cadherin signaling aligns apical surfaces between neighboring epithelial tissues to complete the C. elegans digestive tract
Lauren E. Cote, Maria D. Sallee, Rachel K. Ng, Melissa A. Pickett, Jérémy Magescas, Jessica L. Feldman

TWIST1 Modulates Cilia Length, Endocytic Vesicle Dynamics, and Cell-Cell Junctions during Neural Tube Morphogenesis
Derrick Thomas, Brittany M. Hufft-Martinez, Zarna Lalwani, Vi Pham, Mary Elmeniawi, An J. Tran, Jianming Xi, Irfan Saadi, Walid D. Fakhouri

Novel Tissue Mechanics-Guided Cellular Flows Enable the Evolution of Feather Follicles
Hans I-Chen Harn, Ting-Xin Jiang, Chih-Han Huang, Wen-Tau Juan, Tzu-Yu Liu, Tsao-Chi Chuang, Wan-Chi Liao, Yingxiao Wang, Ji Li, Cornelis J. Weijer, Ping Wu, Chin-Lin Guo, Cheng-Ming Chuong

A switch in collagen expression regulates cessation of distal tip cell migration in C. elegans
Victor Stolzenbach, Sophie S. Griffin, Priti Agarwal, Ronen Zaidel-Bar, Erin J. Cram

From Stolzenbach et al. This image is made available under a CC-BY-NC 4.0 International license.

| Genes & genomes

Tuning Mitotic Recombination with Patterned DNA Nicks for Precision Mosaic Analysis
Yifan Shen, Ann T. Yeung, Bei Wang, Payton Ditchfield, Elizabeth Korn, Chun Han

Epigenomic landscape of the developing human rhombic lip reveals gene regulatory network and non-coding loci of developmental, evolutionary, and disease relevance
Xinghan Sun, Soumya Menon, Paul Wambo, Ilinca Lungu, Kimberly A. Aldinger, Shraddha Pai

TET1 non-catalytic activity shapes the chromatin landscape that directs de novo methylation establishment in the male germline
R.D. Prasasya, J. J. Kim, Z. Liu, R. M. Kohli, M. S. Bartolomei

Comprehensive Single Molecule View of Transcriptional Dynamics in Development
Thomas W. Tullius, Tohn Borjigin, Michael Levine

Loss of cell cycle gatekeeping by CNOT3 impairs hematopoietic stem and progenitor cell division and repopulating activity
Katie Yuen, Thilelli Taibi, Quang Anh Hoang, Marty Yue, Zongmin Liu, Effat Habibi, Elias Spiliotopoulos, Niveditha Ramkumar, Nick Nation, Glenn Edin, Thuy T. M. Ngo, Ly P. Vu

Sex-biased transcriptome in embryonic mouse cortices under Pax6 haploinsufficiency highlights Pbdc1 as a candidate regulator
Shyu Manabe, Shohei Ochi, Takako Kikkawa, Sharmin Naher, Mai Saeki, Kohdai Yamada, Hidetaka Kosako, Yusuke Kishi, Tatsuya Sawasaki, Noriko Osumi

DNA methylation profiles in diabetic embryos
Pu-Yu Li, Fu-Li Zhao, Yi-Juan Song, Bing-Yao Lei, Hao-Jin Niu, Ying-Fang Wang, Hong-Wei Jiang

Dynamic regulation of a domesticated DNA transposon-derived gene, in human germline and early embryonic development
Tanuja Bhardwaj, Sharmistha Majumdar

Induction of cellular totipotency by NACC1-driven feed-forward regulation
Thulaj Meharwade, Gilberto Duran-Bishop, Loïck Joumier, Sabin Dhakal, Mohammed Usama, Sanidhya Jagdish, Élie Lambert, Yacine Kherdjemil, François Robert, Mohan Malleshaiah

ALDH1L1 links folic acid and retinoic acid to prevent neural tube defects
Tamir Edri, Tali Abbou-Levy, Dor Cohen, José M. Inácio, Yehuda Shabtai, Graciela Pillemer, José António Belo, Abraham Fainsod

PEG10-ORF1 programs trophoblast progenitor development for placental labyrinth formation
Hirosuke Shiura, Mayuko Fujii, Masatoshi Ooga, Sayaka Wakayama, Daiyu Ito, Takashi Kohda, Tomoko Kaneko-Ishino, Fumitoshi Ishino

The transcription factor Osr1 regulates epithelial-mesenchymal crosstalk during embryonic bladder development
V Murugapoopathy, IR Gupta

A novel role for the CNTN6 locus in lumenization and radial glial cell fate determination during early human cortical development revealed in cerebral organoids
T.A. Shnaider, A.M. Yunusova, S.A. Yakovleva, A.S. Knyazeva, I.E. Pristyazhnuk, P.S. Belokopytova, A.A. Khabarova, A.S. Ryzhkova, V.S. Fishman, T.V. Nikitina, I.N. Lebedev, V.S. Tarabykin, A.V. Smirnov, O.L. Serov

From Shnaider et al. This image is made available under a CC-BY 4.0 International license.

Dynamic landscapes of gene regulatory networks in early mammalian neurogenesis: Insights into brain evolution and disorder risk
Kalpana Hanthanan Arachchilage, Ryan D. Risgaard, Jie Sheng, Pubudu Kumarage, Jerome J. Choi, Sayali Anil Alatkar, Chirag Gupta, Xinyu Zhao, André M. M. Sousa, Daifeng Wang

METTL3 Uncouples Chromatin Accessibility from Transcription during Retinal Development
Jing Xu, Yuanhao Huang, Zhaowei Han, Qiang Li, Jie Liu, Rajesh C. Rao

| Stem cells, regeneration & disease modelling

Human pancreatic organoids derived from pluripotent stem cells recapitulate pancreatic organogenesis
Jonathan A. Brassard, Patrizia Tornabene, Daniel O. Kechele, Lily Deng, Julie B. Sneddon, Mansa Krishnamurthy, James M. Wells

Androgen receptor imprints satellite cells stemness and preserves their reservoir for lifelong regeneration and optimal repair
Joe G. Rizk, Kamar C. Ghaibour, Sirine Souali-Crespo, Aurore Bilger, Emilia Calvano, Hugues Jacobs, Nadia Messaddeq, Qingshuang Cai, Erwan Grandgirard, Rajesh Sahu, Arnaud Ferry, Gianni Zanardelli, Nacho Molina, Coralie Fontaine, Jean-François Arnal, Daniel Metzger, Delphine Duteil

Generation and validation of an aryl hydrocarbon receptor knockout human embryonic stem cell line
Noa Gang, Cuilan Nian, Ekaterina Filatov, Dahai Zhang, Myriam P. Hoyeck, Bailey Laforest, Francis C. Lynn, Jennifer E. Bruin

Low oxygen promotes extravillous trophoblast progenitor expansion but restrains maturation
Gina L. McNeill, Giada Guntri, Ida Calvi, Alastair H. Kyle, Hans-Rudolf Hotz, Victoria M. Leonard, Willie Wu, Matthew J. Shannon, Andrew I. Minchinton, Keegan Korthauer, Margherita Y. Turco, Alexander G. Beristain

Combined Metabolic and Viral Insults in Pregnancy Disrupt Specific Placental Nutrient Transporter Systems in Mice
Thaina Ferraz, Lucas Cardoso, Sadra Mohammadkhani, Enrrico Bloise, Kristin Connor

Glucocorticoid Receptor Signaling in Myeloid Cells Orchestrates Inflammation Resolution and Muscle Repair
Sirine Souali-Crespo, Joe G. Rizk, Emilia Calvano, Rajesh Sahu, Emina Colovic, Imane Chabba, Valentine Gilbart, Erwan Grandgirard, Bastien Morlet, Qingshuang Cai, Daniel Metzger, Delphine Duteil

Gsx2 Regulates Oligodendrocyte Precursor Formation in the Zebrafish Spinal Cord
Kimberly Arena, Christina A. Kearns, Mohamoud Ahmed, Rebecca O’Rourke, Charles Sagerstrom, Santos Franco, Bruce Appel

NanoCT-confocal mapping of mouse ovaries reveals lifespan-persistent symmetric organizational rules of primary-to-preovulatory follicles
Giulia Fiorentino, Andrea Fantinato, Annapaola Parrilli, Tommaso Marzi, Cesare Alippi, Riccardo Bellazzi, Laura Rienzi, Filippo Maria Ubaldi, Alberto Vaiarelli, Valeria Merico, Paola Rebuzzini, Danilo Cimadomo, Silvia Garagna, Maurizio Zuccotti

Domain-specific mechanisms of YAP1 variants in ocular coloboma revealed by in-vitro and organoid studies
Srishti Silvano, Annika Rick-Lenze, James Bagnall, Mrinalini Saravanakumar, Xinyu Yang, Robert Lea, Lindsay Birchall, Julie R. Jones, Jessica M. Davis, Anzy Miller, Rachel E. Jennings, Elliot Stolerman, Jamie M. Ellingford, Simon C. Lovell, Forbes Manson, Gavin Arno, Panagiotis I. Sergouniotis, Cerys S. Manning

From Silvano et al. This image is made available under a CC-BY 4.0 International license.

Buffering of genetic defects in animal development by regeneration programs
Kazunori Ando, Sushant Bangru, John Welsby, John D. Thompson, Kenneth D. Poss

Failure of DNA repair leads to the tumorigenic transformation of a regenerating blastema in Drosophila imaginal discs
Tanroop Kaur, Ada Repiso, Ying Liu, Paula Doria, Joan Urgell, Luis Rodriguez-Escudero, Katerina Karkali, Yanhui Hu, Norbert Perrimon, Enrique Martin-Blanco

Trophoblast stem cells and syncytiotrophoblasts lack inflammatory responses to LPS but retain robust interferon-mediated antiviral immunity
Cristine R. Camp, Joshua Baskaran, Matthew Brown, Carly Parker, Paige Drotos, Rachel C. West

Pax6 maintains lens epithelial cell identity and coordinates secondary fiber cell differentiation
Barbora Antosova, Jana Smolikova, Anna Zitova, Jitka Lachova, Zbynek Kozmik

Hierarchical lineage architecture of human and avian spinal cord revealed by single-cell genomic barcoding
Giulia L. M. Boezio, Jasper R. L. Depotter, Thomas J. R. Frith, Arthur Radley, Stephanie Strohbuecker, Ana C. Cunha, Michael Howell, James Briscoe

PIWIL3-piRNA Pathway Is Essential for Rabbit Oogenesis and Embryogenesis via Broad Regulation of the Transcriptome and Proteome
Yuanyuan Gong, Ling Li, Yuqiang Qian, Ting Lu, Zhaoran Zhang, Lichun Jiang, Guohui Liu, Meihua Cui, Shangang Li, Zhanjun Li, Shuo Shi, Haifan Lin

Maternal High Fat Diet and Acute Viral Mimic Exposure Impact Placental Inflammation, Lipid Peroxidation, and Cellular Dynamics Across Mouse Pregnancy
Thaina Ferraz, Lucas Cardoso, Sadra Mohammadkhani, Enrrico Bloise, Kristin L. Connor

A model of apical-out human first trimester trophoblast organoids to study regeneration after syncytial damage
Ida Calvi, Giada Guntri, Alexandra Graff Meyer, Lhéanna Klaeylé, Qian Li, Jan Seebacher, Hans-Rudolf Hotz, Naomi McGovern, Margherita Y. Turco

Lipid Metabolism Remodeling in Human Cardiomyocyte Differentiation and Maturation
Haite Tang, Raina Liu, Zhiqiang Xiong, Qiqi He, Gang Lu, Wai-Yee Chan, Wuming Wang

Dynamic Spiral Artery Remodeling in Early Human Pregnancy: An Analysis of Specimens Collected with a Standardized Protocol
Shenglong Ye, Yeling Ma, Wenlong Li, Linjing Qi, Xiao Fang, Xin Yu, Duo Yu, Xiaoye Wang, Dong-bao Chen, Yan-Ling Wang

Human organoids reveal PTEN-driven mesendoderm specification via retinoic acid signaling suppression
Wuming Wang, Qiqi He, Hong Zhang, See-Wing Chan, Zhiqiang Xiong, Haite Tang, Yue Lv, Xianwei Su, Ya Guo, Yong Fan, Xingguo Liu, Xiuwu Bian, Andrew M. Chan, Hongbin Liu, Gang Lu, Wai-Yee Chan

Uterine stromal Erbb3-Igf1 signaling is critical to functional gland development conducive to implantation
Bo Li, Mengyuan Wang, Amanda Dewar, Wenbo Deng, Sudhansu K. Dey, Xiaofei Sun

From Li et al. This image is made available under a CC-BY 4.0 International license.

Single-cell transcriptomic profiling of bam mutant tumor reveals germline heterogeneity and gcrf1 as a modulator in Drosophila germ cells
Zhipeng Sun, Yujun Zeng, Todd G. Nystul, Guohua Zhong

Transient let-7/miR-98 reprograms primed pluripotency to induce naive human PSCs
Yoshihiko Fujita, Moe Hirosawa, Karin Hayashi, Hiroki Ono, Belinda Kaswandy, Mai Ueda, Maya Lopez, Takuya Yamamoto, Yasuhiro Takashima, Hirohide Saito

From Fujita et al. This image is made available under a CC-BY-NC 4.0 International license.

Flexible oocyte manipulation with delayed maturation and improved SCNT efficiency using induced pluripotent stem cells
Luis H. de Aguiar, Yoke Lee Lee, Abdallah W. Abdelhady, Prasanthi Koganti, Vimal Selvaraj, Soon Hon Cheong

In Vitro Fertilization Accelerates Female Reproductive Aging Through Early Ovarian Failure
Eric A. Rhon-Calderon, Cassidy N. Hemphill, Alexandra J. Savage, Ana Domingo-Muelas, Zhengfeng Liu, Christopher J. Krapp, Laren Riesche, Nicolas D. Plachta, Richard M. Schultz, Marisa S. Bartolomei

Dysregulated circRNA expression profile and associated miRNA sponging in abnormal lung development in congenital diaphragmatic hernia
Marietta Jank, Arzu Ozturk Aptekmann, Muntahi Mourin, Nolan De Leon, Matthew Kraljevic, Daywin Patel, Wai Hei Tse, Claire McCallum, Richard Wagner, Shana Kahnamoui, Yuichiro Miyake, Athanasios Zovoilis, Michael Boettcher, Richard LeDuc, Richard Keijzer

IPSC-based modeling of resiliency in centenarians reveals longevity-specific signatures
Todd W. Dowrey, Samuel F. Cranston, Nicholas Skvir, Yvonne Lok, Payton Bock, Elizabeth K. Kharitonova, Elise MacDonald, Ella Zeldich, Christopher Gabel, Alexander Tyshkovskiy, Stefano Monti, Vadim N. Gladyshev, Paola Sebastiani, Thomas T. Perls, Stacy L. Andersen, George J. Murphy

PPARG directs trophoblast cell fate and establishment of the uterine-placental interface
Esteban M. Dominguez, Ayelen Moreno-Irusta, Khursheed Iqbal, Keting Chen, Alex Finlinson, Marc Parrish, Hiroaki Okae, Takahiro Arima, Geetu Tuteja, Michael J. Soares

Cfap300 regulates the transdifferentiation of Corpuscle of Stannius cells in zebrafish
Usharani Nayak, Kalyani Sahoo, Praveen Barrodia, Rajeeb K. Swain

Basal cytoplasmic calcium levels regulate C. elegans germ stem cell proliferation
Alexandra C. Wells, Parva M. Vyas, Aahana N. Shankaran, Corrissa J. Velder, Rabia N. Kaya, Edward T. Kipreos

Regeneration of distinct complex structures in the annelid Platynereis is partially based on common morphological, cellular, and molecular events
Zoé Velasquillo Ramirez, Viktor Starunov, Louis Paré, Loeiza Baduel, Théaud Hezez, Sophie Lemoine, Catherine Senamaud-Beauford, Michel Vervoort, Morgane Thomas-Chollier, Nikos Konstantinides, Eve Gazave

Impaired subgranular zone radial glia morphology and transient amplification of neural progenitors in Mllt11-deficient mice leads to increased hippocampal neurogenesis
Sam Moore, Danielle Stanton-Turcotte, Karolynn Hsu, Emily A. Witt, Angelo Iulianella

Lineage Tracing Reveals a Shared Cellular Origin for Supraclavicular Brown and Inguinal Beige Adipocytes
Yali Ran, Kai Zhang, Yi-Ting Shen, Qianxing Mo, Ziyi Wang, Hari Krishna Yalamanchili, Sharon John, Mari Kogiso, Xia Gao, Chunmei Wang, Tanvi Sinha, Brian L. Black, Miao-Hsueh Chen

ETV2 mediated differentiation of human pluripotent stem cells results in functional endothelial cells for engineering advanced vascularized microphysiological models
Shun Zhang, Zhengpeng Wan, Lei Wang, Caihong Wu, Junkai Zhang, Sarah Spitz, Xun Wang, Marie A. Floryan, Mark F Coughlin, Francesca M. Pramotton, Liling Xu, Ron Weiss, Roger D. Kamm

Human iPSC-derived salivary gland organoids model diabetic salivary gland dysfunction
Devon Duron Ehnes, Akira Morishita, Ashish Phal, Hee Yun Jung, Yen Chian Lim, Zachary Foreman, Vincenzo Cirulli, Julie Mathieu, Hannele Ruohola-Baker

| Plant development

Maternal transmission of a plastid structure enhances offspring fitness
Tyler J. Carrier, Andrés Rufino-Navarro, Thorben Knoop, Urska Repnik, Andrés Mauricio Caraballo-Rodríguez, David M. Needham, Corinna Bang, Sören Franzenburg, Marc Bramkamp, Willi Rath, Arne Biastoch, José Carlos Hernández, Ute Hentschel

Rice Ethylene Receptors Function as Ca²⁺-Permeable Ion Channels to Orchestrate Calcium-Dependent Antagonism of Ethylene Responses in Roots
Zhangli Ye, Zijian Yang, Changyuan Li, Yangbo Chen, Enjie Yu, Chunhui Song, Zongran Yang, Shuo Liu, Hao Tian, Dongdong Kong, Legong Li, Liangyu Liu

Primary metabolism underpins the execution of immune responses in different tissues of the same plant
Emma C. Raven, Rhea Stringer, Catherine Walker, Hannah Rae Thomas, Christine Faulkner

From Raven et al. This image is made available under a CC-BY 4.0 International license.

Assembly of two functionally-distinct protein import complexes in the outer membrane of plant chloroplasts
Sreedhar Nellaepalli, Domagoj Baretic, Astrid F. Brandner, Sybille Kubis-Waller, Ziad Soufi, Shuyang Cheng, Sireesha Kodru, Jun Fang, Ursula Flores-Perez, Vaishnavi Ravikumar, Pablo Pulido, Marjorie Fournier, Ivan Ahel, Syma Khalid, R. Paul Jarvis

| Environment, evolution and development

Sensory receptor expansion and neural accommodation in butterfly color vision
Ke Gao, Julia Ainsworth, Antoine Donati, Yunchong Zhao, Michelle Franc Ragsac, Cara Genduso, Zoie Andre, Andrew Tomlinson, Michael W. Perry

From Gao et al. This image is made available under a CC-BY 4.0 International license.

Two Cytochrome P450 epoxidases mediate juvenile hormone biosynthesis in Drosophila melanogaster
Daiki Fujinaga, Yuya Ohhara, Naoki Okamoto, et al.

Endothelin 3 and T-type Ca²⁺ channels drive enteric neural crest cell calcium activity, contractility and migration
Nicolas R. Chevalier, Fanny Gayda, Nadège Bondurand, et al.

Loss of the distal-proximal GLP-1/Notch activation gradient in the aging C. elegans germline
Rustelle Janse van Vuuren, Pier-Olivier Martel, Patrick Narbonne

Apoptosis promotes fertility in C. elegans by maintaining functional germline morphology
UN Saydee-Onwubiko, ME Werner, GC Trapp, AS Maddox

Trehalose metabolism regulates transcriptional control of muscle development in lepidopteran insects
Sharada Mohite, Tanaji Devkate, Prashant Kalaskar, Prashant Singh, Abhishek Subramanian, Rakesh Shamsunder Joshi

fgf8a signalling shapes brain divergence between Malawi cichlids
Aleksandra Marconi, Jake Morris, Pío Sierra, Dillan Saunders, Joel Elkin, Benjamin Steventon, Richard Durbin, Stephen H. Montgomery, M. Emília Santos

From Marconi et al. This image is made available under a CC-BY 4.0 International license.

Circulating hemocytes continue to proliferate throughout lifespan in Daphnia
S.C. Cuthrell, L. Y. Yampolsky

Cell Biology

Kv2.1-Kv6.4 subunits deficiency impairs inhibitory signaling and visual circuit dynamics in zebrafish
Ruchi P. Jain, Rosa R. Amini, Lukasz Majewski, Vladimir Korzh

Multiplexed embryo profiling links cellular state to zygotic genome activation in single cells
Max Hess, Marvin F. Wyss, Edlyn Wu, Joel Lüthi, Chiara Rebagliati, Nadine L. Vastenhouw, Darren Gilmour, Shayan Shamipour, Lucas Pelkmans

Lymphatics unload VEGFR3 in response to the endothelial stress upon VEGFR2 insufficiency
Taotao Li, Xudong Cao, Fei Zhou, Xiujuan Li, Wenjuan Ma, Haoyu Zhong, Beibei Xu, Man Chu, Xiwen Jia, Kai Ding, Xin Shen, Yahui Liu, Yun Zhao, Zhen Zhang, Junhao Hu, Young-Kwon Hong, Lena Claesson-Welsh, Yulong He

Clinical Interventions and Inflammatory Signaling Shape the Transcriptional and Cellular Architecture of the Early Postnatal Lung
Tristan Frum, Angeline Wu, Marcela S. Ymayo, Yu-Hwai Tsai, Sha Huang, Mengkun Yang, Sydney G. Clark, Peggy P. Hsu, Ian A. Glass, Gail H. Deutsch, Jason R. Spence

From Frum et al. This image is made available under a CC-BY 4.0 International license.

Trophoblast stem cells and syncytiotrophoblasts lack inflammatory responses to LPS but retain robust interferon-mediated antiviral immunity
Cristine R. Camp, Joshua Baskaran, Matthew Brown, et al.

Direct comparison of constitutive Rax-Cre transgenic drivers that activate in the mouse embryonic eye field
Nadean L. Brown, Samuel Goodyear-Brown, Sabine Fuhrmann

ABCC6 and ANK regulate extracellular homeostasis of pyrophosphate and citrate and affect mineral deposition in bones and soft connective tissues
Flora Szeri, Fatemeh Niaziorimi, Celina Ng, Cassandra Mikkelson, Ibtesam Rajpar, Qinglin Wu, Steven P. Matyus, Margery A. Connelly, George Tavadze, Stefan Lundkvist, Ryan E. Tomlinson, Koen van de Wetering

Hemidesmosomes regulate epidermal differentiation during embryogenesis
Juliet S. King, Kendall J. Lough, Scott E. Williams

Fluid-Niche and Microglial Signatures Prime Robust Intraventricular Macrophage Response to Blood During Brain Development
Miriam E. Zawadzki, Christine Hehnly, Jordan C. Benson, Dario X. Figueroa Velez, Sivan Gelb, Ceva Stanley, Lillian I.J. Byer, Huixin Xu, Cameron Sadegh, Aja Pragana, Maria K. Lehtinen

Nuclear lamina-associated domain biogenesis is regulated by nuclear pore density during embryogenesis and mediates UV protection
Fei Xu, Adrián Fragoso-Luna, Itai Sharon, Angelo L. Angonezi, Ohad Medalia, Peter Askjaer, Susan E. Mango

Modelling

Excitatory neurons as the default fate in bifurcation of excitatory and inhibitory neuron lineages
Mei Wang, Xiao-Ying Qiu, Yun-Bin Duan, Xia Tang, Qi Lu, Yan Li, Hui-Wen Qin, Xing-Tao Long, Meng-Meng Jin, Peng-Yu Fan, Hui Zhang, Ya-Nan Li, Jie He

Integrative Functional Genomics Identifies ARHGAP10 in the 4q31.2 Locus as a Novel Congenital Heart Disease and Ciliopathy Gene
Ewelina Sochaka, Svanna Hinson, Dave Shook, Doug DeSimone, Saurabh Kulkarni

Rapid canalization of chromosome conformation-transcription fingerprints during embryogenesis revealed by fully-automated cell identity decoding with CeSCALE
Konstantinos Ntemos, Fei Xu, Nour-Zaynab Bazzi, Geoffrey Fucile, Hermina Petric Maretic, Ivan Dokmanic, Susan E. Mango, Ahilya N. Sawh

From Ntemos et al. This image is made available under a CC-BY 4.0 International license.

A Single-cell Spatiotemporal Manifold of Tissue Morphology and Dynamics
Erin Haus, Anthony Santella, Yichi Xu, Ruohan Ren, Dali Wang, Zhirong Bao

Stochastic Modeling of BMP Heterodimer-Receptor Interactions Shows Emergence of Low-Pass Filtering Behavior
Nissa J. Larson, Aasakiran Madamanchi, Linlin Li, David M. Umulis

A conserved logic for the development of cortical layering in tetrapods
Astrid Deryckere, Saket Choudhary, Connor Lynch, Lian Kirit V. P. Limperis, Pauline Affatato, Jamie Woych, Elias Gumnit, Alonso Ortega Gurrola, Rahul Satija, Christian Mayer, Maria Antonietta Tosches

Tools & Resources

Jam2 Signaling Functions Downstream of Hand2 To Initiate The Formation Of Organ-Specific Vascular Progenitors In Zebrafish
Martyna Griciunaite, Julius Martinkus, Sanjeeva Metikala, Ricardo DeMoya, Suman Gurung, Diandra Rufin Florat, Saulius Sumanas

A toolkit for testing membrane-localising tags across species
Irene Karapidaki, Mette Handberg-Thorsager, Tsuyoshi Momose, Hitoyoshi Yasuo, Grigory Genikhovich, Sarah Assaf, Clara Deleau, Ying Pang, Clayton Pavlich, Beke Lohmann, Maria Lorenza Rusciano, Mattia Stranges, Juliette Mathieu, Marie Zilliox, Kirill Ustyantsev, Bastien Salmon, Béryl Laplace-Builhé, Manon Koenig, Jeffrey J. Colgren, Maria Ina Arnone, Eugene Berezikov, Thibaut Brunet, Gregor Bucher, Pawel Burkhardt, Daniel J. Dickinson, Evelyn Houliston, Jan Huisken, Lucas Leclère, Michalis Averof

From Karapidaki et al. This image is made available under a CC-BY 4.0 International license.

The SPN-4 Rbfox RNA-binding protein selects maternal mRNAs for CCR4-NOT-dependent clearance in early Caenorhabditis elegans embryos
Caroline A. Spike, Dylan M. Parker, Tatsuya Tsukamoto, Naly Torres-Mangual, Erika C. Tsukamoto, Karissa Coleman, Micah D. Gearhart, David Greenstein, Erin Osborne Nishimura

Dissecting Small Noncoding RNA Landscapes in Mouse Preimplantation Embryos and Human Blastoids for Modeling Early Human Embryogenesis
Savana Biondic, Zhao Cheng, Richard Yin, Thorold Theunissen, Sophie Petropoulos

Generation of parasympathetic neurons from hiPSC that reproduce the electrophysiological properties of native neurons and modulate the activity of hiPSC-atrial cardiomyocytes
Alison M. Thomas, Isabella Noelle Chiong, Joana F Neves, Andrew Tinker, Franziska Denk,  Laura Fedele

TUSC3 serves as a rate-limiting gatekeeper of a glycan-mediated ER Triage Checkpoint for BMP4/Dpp
Antonio Galeone, Emilio Solazzo, Francesco Lavezzari, Seung-Yeop Han, Bruna My, Riccardo Rizzo, Giuseppe Gigli, Hamed Jafar-Nejad, Thomas Vaccari

A regulatory region that controls Wnt gene expression following tissue injury is required for proper muscle regeneration
Catriona Y. Logan, Xinhong Lim, Matt Fish, Makiko Mizutani, Brooke Swain, Roel Nusse

Research practice & education

The W-index: a novel tool to evaluate gender equity in STEM research
Penelope Holland, Jalene M. LaMontagne, V. Bala Chaudhary, Suw Charman-Anderson, Lindsey Gillson, Thorunn Helgason, Angela Lipscomb, Elva J. H. Robinson, Alex James

Systematic Review of Over A Century of Global Bioscience Research
Okechukwu Kalu Iroha, Dauda Wadzani Palnam, Peter Abraham, Israel Ogwuche Ogra, Ndukwe K. Johnson, Elkanah Glen, Dasoem Naanswan Joseph, Seun Cecilia Joshua, Grace Peter Wabba, Morumda Daji, Dogara Elisha Tumba, Mercy Nathaniel, Emohchonne Utos Jonathan, Samson Usman, Mela Ilu Luka, Vaibhav B. Sabale, Emmanuel Oluwadare Balogun, Umezuruike Linus Opara

New Quantitative Cost-Impact Effectiveness Indexes to Assist in Publication Decisions by Researchers in the Open Access Era
Julia C. Hardy, Christine Kim Vu, Dong Wang

Enhancing CRISPR Education: A Plug-And-Play Framework for Teaching Gene Editing in Plant Biology
Divya Jain, Faizan Ali, Gift Obunkukwu, Hyndavi Yammanuru, Jing Zou, Joshua Obeng, Kyla Danae Hughes, Laxmi Joshi, Madhavarapu Sudhakar, Oluwaseun Adeyemi, Peter Prestwich, Shahla Borzouei, Shivani Dharam, Shubh Pravat Singh Yadav, Mst Sumayae Khan, Rajni Parmar, Upama Adhikari, Ali Taheri, Robin Taylor, Vicki Caruana, Mary Williams, Sonali Roy

How to catch flies in the city (fast): Citizen Science on Drosophila ecology helps to raise awareness for biodiversity in urban environments
Isolde Gottwald, Sonja Steindl, Flora Strasser, Megumi Kiesel, Heimo Rainer, Elisabeth Haring, Martin Kapun

Evaluating peer-to-peer bioinformatics education: a case study of student learning outcomes and community impact in an undergraduate multi-omic data analysis course
Wade R. Boohar, Kayla Y. Xu, Nicole Black, Mahija Mogalipuvvu, Kate Manley, Peter Calabrese, Jerry S.H. Lee

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A bittersweet acceptance: Between a manuscript and grief

Posted by , on 10 November 2025

I was so excited when I received notification that my first first-author research paper was accepted. My excitement quickly turned into sadness with the realization that my co-PI was not seeing our vision come to fruition.

The first time I met Scott Hawley was in my genetics module. As a fresh PhD student at the Stowers Institute for Medical Research, I was eager to soak up new knowledge. Studiously, I had already gone through the recommended reading material, chapters from one of Scott’s books. Post it notes were poking out of my binder containing those pages, revealing where I had written down thoughts and questions. The idea of Scott could be intimidating: an infamous scientist in the fields of meiosis and fly genetics. Quickly it became clear that there was no reason to be intimidated. He had a passion for teaching and supporting others where he could. Shortly after we wrapped up the genetics module, I ran into Scott in the cafeteria where he asked if I would consider rotating in his lab. I was exhilarated because I already had the same idea.

When I started my first lab rotation a few months later, I was brimming with what we in Germany would call “Vorfreude” (engl.: “pre-joy”). I had previously met with Scott and my supervisor Cathy about my project for the next eight weeks. The project they had in mind for me was focused on the synaptonemal complex, a structure I had never heard of before coming to Stowers. The topic sounded exciting and I quickly became fascinated by it. What I came to understand was that in early meiosis, this protein structure forms between the paired maternal and paternal copy of each chromosome (Fig. 1a). If it does not form properly, crossovers between these two chromosome copies cannot be made properly, causing the faulty segregation of chromosomes (Fig. 1b). The lab of Scott Hawley was one of the many labs trying to understand how the synaptonemal complex was involved in these processes.

Fig. 1: Meiosis I and the synaptonemal complex (SC). a) Under normal conditions, the maternal and paternal copy of each chromosome pair and the SC subsequently forms between them. This allows for the formation of crossovers between the homologous chromosomes which ensures their proper segregation at the end of meiosis I. b) If the SC does not form properly, crossovers are severely diminished causing faulty chromosome segregations.

The Hawley lab, and one of my co-authors specifically, had established a mutated fruit fly. This was nothing out of the ordinary for fly people, we love that stuff! This interesting mutation removed the gene coding for the synaptonemal complex protein Corolla and inserted in that very location the coding sequence for the same protein but from a closely related species. My goal for the rotation was to perform the first characterizations of the effects this gene replacement had on meiosis. Cathy already had a plan for which experiments I should do and with her support I got to work. I made crosses, scored flies, and performed microscopy. Some of the work was old habit, most of it was new to me. Quickly it became clear what we were dealing with: The synaptonemal complex in these flies was disassembling too early (Fig. 2a) and, unsurprisingly, there was a moderate but significant increase in faulty chromosome segregation (Fig. 2b)1. Where it got confusing (and intriguing!) was that crossover rates on the X chromosome were almost entirely abolished (Fig. 2c)1. The near complete lack of X chromosome crossovers should lead to a dramatically higher rate of errors in chromosome segregation. Scott loved it and he offered me to join his lab to figure out how these phenotypes arose.

Fig. 2: The effect of the corolla gene replacement on meiosis. a) Microscopy images of the SC in wild type fruit flies (= corolla+)and the gene replacement flies (= corollamau) visualized through immunofluorescence of the two SC proteins C(3)G and Corolla. While the SC stays intact through meiotic progression in corolla+ flies, it disassembles in corollamau flies. Scale bar represents 1 mm length. b) Rate of faulty X chromosome segregation. corollamau flies have an increased rate of chromosome segregation errors. c) Crossovers on the X chromosome as a percentage of rates in corolla+ flies. Crossover rates are significantly lower. d) Crossovers on the 2nd chromosome as a percentage of rates in corolla+ flies. Specific intervals show a decrease or increase of crossovers but overall there is no significant difference. * means p ≤ 0.05, ** means p ≤ 0.01, *** means p ≤ 0.001, **** means p ≤ 0.0001.

A bit less than 16 weeks later I had made my decision. While I was not going to join the Hawley lab as he first imagined it, I was going to be co-supervised by Scott Hawley and Matt Gibson to work on a joint project. However, we agreed that I could continue working on the project I had begun during my rotation in the Hawley lab. The experiments should have been straightforward but as science often goes, it took longer than we thought to finish. As a clear next step, I looked at the rates of crossovers on a different chromosome. Fruit flies only have four chromosomes: The sex chromosomes X and Y, the two large autosomes as known as the 2nd and 3rd chromosomes, and a very small 4th  chromosome. We needed to look at one of the large autosomes. It would not have made a huge difference as we knew there was differences in how crossovers on the sex chromosomes and autosomes respond to synaptonemal complex defects but autosomes between one another did not show major differences2.  Therefore, we decided to look investigate crossovers on the 2nd chromosome as a representative autosome. While crossovers were almost entirely absent from the X chromosome, the effect on crossovers on the 2nd chromosome was nowhere near as dramatic (Fig. 2d)1. These results solved our confusion as to why the chromosome segregation machinery was not overwhelmed by chromosomes lacking crossovers.

Thinking the work was done, I presented the story at an internal seminar. As it was my first talk in front of a larger audience, it was exhilarating, especially because I received a lot of questions at the end of my talk. One of those questions was fascinating: “Have you tried looking at these flies at a colder temperature? That might change its disassembly dynamics.” Scott loved the idea and it was an easy experiment to do. The standard rearing temperature we maintained the flies at was 25 °C. I moved these flies to 18 °C instead and indeed, the synaptonemal complex stayed fully intact (Fig. 3a)1! So, I went back to the bench to repeat the chromosome segregation and crossover experiments at this colder temperature. Due to the rescue of the early disassembly of the synaptonemal complex, crossovers on the X chromosome were improved but overall crossovers still did not reach wild type levels and chromosome segregation was still significantly higher than in wild type flies (Fig. 3b-d)1. This was even more exciting as it meant that this synaptonemal complex protein, Corolla, is not only part of the structure itself but directly involved in crossover formation.

Fig. 3: Temperature-sensitive phenotypes in corollamau flies. a) Microscopy images of the SC in wild type fruit flies (= corolla+)and the gene replacement flies (= corollamau) visualized through immunofluorescence of the two SC proteins C(3)G and Corolla. The SC stays intact throughout meiotic progression in corollamau flies reared at 18 °C. Scale bar represents 2 mm length. b) Rate of faulty X chromosome segregation. corollamau flies reared at 18 °C still have an increased rate of chromosome segregation errors. c) Crossovers at 18 °C on the X chromosome as a percentage of rates in corolla+ flies. Crossover rates are significantly lower. d) Crossovers at 18 °C on the 2nd chromosome as a percentage of rates in corolla+ flies. Specific intervals show a decrease or increase of crossovers but overall there is no significant difference. * means p ≤ 0.05, ** means p ≤ 0.01, *** means p ≤ 0.001, **** means p ≤ 0.0001.

I was finishing up some last experiments before writing up the complete story. During that time, on a Friday morning in late January I arrived at the lab and Cathy quickly found me. By the look of her face, I immediately knew that she was bearing bad news. Scott had died that morning. Of course, in good old Scott fashion, he had emailed people from the lab about work related matters earlier that morning just prior to that. I liked that. I think that’s how he would have wanted to go, thinking of his science until the very end. Him being gone did not make any sense. I couldn’t even imagine how Cathy must have felt. She has worked with Scott for over two decades. Even for me, Scott was more than just my co-PI. He was my biggest supporter, always looking for ways to push me and my career further. We shared ideas for crazy experiments and talked about papers we recently read. I had realized already that I wanted to continue studying the synaptonemal complex beyond my PhD, a field I stumbled into by accident. And while the fact that he to his last day suffered from imposter syndrome did not fill me with confidence that I could beat mine, a part of me felt like I could make it because he said so. But without him? I was not so sure anymore.

I don’t remember much of what I did the following couple of months, but I did finish those last experiments. With the support of Cathy and Stacie, another long-term Hawley lab scientist, I was able to write up the story for the first time. Looking back, I will always remember the embarrassing first draft I sent them. Cutting myself some slack, it was my first time writing a scientific paper. What I came to appreciate is that a first draft is better than nothing because editing is a lot easier than writing about something for the first time. After several drafts went through multiple people (thank you all!), the manuscript was done. The first submission was desk-rejected, which was frustrating, but the second attempt went better. One round of very fair but major revisions later and the paper was accepted.

The acceptance of a scientist’s first first-author publication in a peer-reviewed journal is a milestone achievement. Regardless of what your paper is about, you had to overcome a multitude of hurdles to get to this point. When I saw the notification, I was filled with so much joy. I shared the news with my co-authors, colleagues, and friends. Everyone was excited! Then the sadness hit me. The one person who will not be celebrating this achievement with me was Scott. At that point it had been almost exactly nine months since he passed. I had accepted his death though certain situations were still upsetting. For some reason I hadn’t considered that this particular moment would upset me as well. It was his exuberant joy which I was able to channel and get out of this. I could imagine the email he would send in response to the manuscript acceptance and his palpable jubilation when we would have celebrated in person. I always knew that it was not me who was special but that he made everyone feel special in those moments, something that I can only imagine stems from his own imposter syndrome. There are plenty of people who will celebrate the very big papers and talk admiringly about their favorites. Scott didn’t care where your paper ended up and every trainee who went through his lab was “one of his best”. It is exactly that skill of Scott’s to make everyone around him feel important and special, that has made it possible for me to accept those bittersweet moments. If I can carry only a fraction of that faith forward, into how I move through my own work, how I teach, and how I mentor, then some part of Scott’s spirit will continue living through me and hopefully inspire others.  

References

1. Williams, S., McKown, G., Yu, Z., Gardner, J., Staber, C., Gibson, M.C., Hawley, R.S., The synaptonemal complex component corolla regulates meiotic crossover formation in Drosophila melanogaster. Chromosoma 134, 10 (2025). https://doi.org/10.1007/s00412-025-00839-z

2. K.K. Billmyre, K.K., Cahoon, C.K., Heenan, G.M., Wesley, E.R., Yu, Z., Unruh, J.R., Takeo, S., Hawley, R.S., X chromosome and autosomal recombination are differentially sensitive to disruptions in SC maintenance, Proc. Natl. Acad. Sci. U.S.A. 116 (43) 21641-21650 (2019). https://doi.org/10.1073/pnas.1910840116

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Neanderthal DNA helps explain how faces form

Posted by , on 10 November 2025

A press release from Development

Every human face is unique, allowing us to distinguish between individuals. We know little about how facial features are encoded in our DNA, but we may be able to learn more about how our faces develop by looking at our ancient relatives, the Neanderthals. Neanderthal faces were quite distinctive from our own, with large noses, pronounced brows and a robust lower jaw. Now, scientists from the MRC Human Genetics Unit in the Institute of Genetics and Cancer at the University of Edinburgh, UK, are using the DNA of our extinct distant relatives to learn more about how faces develop and evolve. Published today in the journal Development, they show how a region of Neanderthal DNA is better at activating a jaw-forming gene than the human counterpart, revealing one potential reason for Neanderthal’s larger lower jaws.

Hannah Long (University of Edinburgh, UK), who led the study, explains that scientists have sequenced the Neanderthal genome using DNA extracted from ancient bone and says, “The Neanderthal genome is 99.7% identical to the genome of modern-day humans and the differences between species are likely responsible for altering appearance”. Both human and Neanderthal genomes consist of about 3 billion letters that code for proteins and regulate how genes are used in the cell, which makes finding regions that impact appearance like looking for a needle in a haystack. Fortunately, Long and her colleagues had an informed idea where to look first: a region of the genome that is linked to Pierre Robin sequence, a syndrome in which the lower jaw is disproportionately small. “Some individuals with Pierre Robin sequence have large deletions or DNA rearrangements in this part of the genome that change face development and limit jaw formation. We predicted that smaller differences in the DNA might have more subtle effects on face shape,” said Long.

By comparing human and Neanderthal genomes, the team found that in this region, roughly 3000 letters in length, there were just three single-letter differences between the species. Although this region of DNA doesn’t contain any genes, it regulates how and when a gene is activated, specifically a gene called SOX9, a key coordinator of the process of face development. To demonstrate that these Neanderthal-specific differences are important for the development of the face, Long and colleagues needed to show that the Neanderthal region could activate genes in the right cells at the right time as the embryo develops. The researchers simultaneously inserted the Neanderthal and human versions of the region into the DNA of zebrafish and programmed the zebrafish cells to produce different colours of fluorescent protein depending on whether the human or Neanderthal region was active. Watching the zebrafish embryos develop, the researchers found that both the human and Neanderthal regions were active in the zebrafish cells that are involved in forming the lower jaw and the Neanderthal region was more active than the human version.

A 2-day-old zebrafish embryo viewed from below; with the zebrafish head pointing towards the top-left corner of the image. Within the transparent embryo, the fluorescent cells show activity of the inserted human DNA in specific cells (lower green signal) overlapping with the developing jaw (lower purple signal). Image credit: Kirsty Uttley and Hannah Jüllig.

“It was very exciting when we first observed activity in the developing zebrafish face in a specific cell population close to the developing jaw, and even more so when we observed that the Neanderthal-specific differences could change its activity in development,” said Long. “This led us to think about what the consequences of these differences could be, and how to explore these experimentally.” Knowing that the Neanderthal sequence was more powerful at activating genes, Long and colleagues then asked if the resulting increased activity of its target, SOX9, might change the shape and function of the adult jaw. To test this theory, they provided the zebrafish embryos with extra SOX9 and found that cells that contribute to forming the jaw occupied a larger area.

“In our lab, we are interested in exploring the impact of additional DNA sequence differences, using a technique that mimics aspects of facial development in a dish. We hope this will inform our understanding of sequence changes in people with facial conditions and inform diagnosis,” says Long. This research shows that by studying extinct species we can learn how our own DNA contributes to face variation, development and evolution.


Uttley, K., Jüllig, H. J., De Angelis, C., Auer, J. M. T., Ozga, E., Bengani, H. and Long, H. K. (2025). Neanderthal-derived variants increase SOX9 enhancer activity in craniofacial progenitors that shape jaw development. Development, 152, dev204779. doi:10.1242/dev.204779

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Interview with Nicole Roos and Anthony Wokasch: winners of the MBL Embryology course image competition  

Posted by , on 10 November 2025

Last September marked the return of our image competition with the MBL Embryology course at Woods Hole. The 2025 cohort submitted impressive images, ranging from polychaete worms to butterflies, squid, and mice, using a range of microscopy techniques. Here, we interview Nicole Roos and Anthony Wokasch, the winners of the popular vote of the image competition with their submission, ‘Mouse embryo’. As winners of the image competition, their submission was featured on the cover of a recent issue of Development.  

Can you describe your research career so far?

Nicole: As a kid I loved conducting at-home experiments, visiting the science museum and attending my chemistry and biology classes, so pursuing a career in science has always been a no brainer for me. I started my research career as a freshman at The University of Texas at Dallas, USA, while pursuing my BSc in Biochemistry. Inspired by a family member who survived breast cancer, I joined the lab of Dr Nikki Delk to study chronic inflammation in tumor microenvironments. My interest in genetics was sparked while investigating mutations that affect chromatin remodeler function at the University of Texas Southwestern Medical Center, USA, with Dr Laura Banaszynski. Now, I am a fourth year PhD candidate working with Dr Leila Rieder in the Genetics and Molecular Biology program at Emory University, USA.

Anthony: I began my research career at American University, USA, where I completed a joint BSc/MSc in Biology. During my time there, I did my Master’s thesis in the lab of Naden Krogan, where I characterized the role of the floral boundary gene SUPERMAN (SUP) in a transcriptional mechanism which regulates gene expression and floral organ patterning of the reproductive organs in the flower of Arabidopsis thaliana. Following completion of my Master’s, I became a fellow at the National Cancer Institute (NCI) in the lab of Dr Peter D. Aplan. There I tested the effects of a DNA methyltransferase (DNMT1) inhibitor in a murine model for Myelodysplastic Syndrome (MDS). However, at this point my interest in development was overwhelming and led me to pursue a PhD at Vanderbilt University, USA, where I am a PhD candidate in my fourth year.

Can you tell us about your current research?

Nicole: At Emory, I use the powerful model system Drosophila melanogaster (fruit flies) to study how histone genes, which encode proteins that package and organize DNA in the nucleus, are regulated in embryogenesis and throughout development. Histone gene regulation is uniquely regulated throughout development, and this regulation is carried out by a nuclear body called the histone locus body. Not only do I get to study genetics, but through my research I took interest in developmental biology. This compelled me to apply to the Embryology course offered by the Marine Biological Laboratory (MBL) in Woods Hole, USA, where I discovered a strong desire to study regeneration and/or evolutionary developmental biology in the future.

Anthony: My current research, under the guidance of Dr Maureen Gannon focuses on how the Pdx1 transcription factor and its C-terminal interacting factors, Oc1 and SPOP, regulate the choice between proliferation or differentiation of early pancreatic progenitor cells. This work has deepened my understanding of how epigenetic and molecular factors control cell fate decisions during organogenesis.

What is your favourite imaging technique/microscope?

Nicole: The majority of my research at Emory University requires widefield fluorescence microscopy, so I was excited to take the Embryology Course at the MBL to learn various confocal microscopy techniques. I quickly became fascinated with live imaging using various spinning disc confocal microscopes (my favorite being the Nikon Yokogawa W1 spinning disc) and collaborated with other students to live image processes such as sea urchin egg and sea star sperm cross-fertilization (sea sturchins), nematode egg laying, and early embryonic cleavage of comb jellies. However, I also loved taking intricate fluorescence images on the Evident FV400 scanning confocal, the same microscope we used to take the image of the stained mouse embryo.

Anthony: My favorite microscope is the Evident FV4000 Confocal Laser Scanning Microscope, which we used at the MBL during the course to take this is image. 

What are you most excited about in microscopy? 

Nicole: I’m fascinated by current microscopy techniques which bypass diffraction limit imaging and visualize single molecule interactions. The development of expansion microscopy techniques alongside super resolution microscopy allow scientists to visualize cell biology more deeply now than ever before. I am especially intrigued by the combination of expansion microscopy with stimulated electron depletion (STED), which has been used in fluorescence imaging of chromatin at the nucleosomal level. This can inform the field of developmental biology and my field, where we study DNA-protein interactions to understand how histones are regulated.

Anthony: I am really excited right now doing whole-mount immunofluorescence of embryonic mouse pancreas samples and using confocal microscopy and or light-sheet (LSFM) to reveal key changes of cell fate choices and morphology during development. 

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Categories: Images, Interview, News

Catch up on Development presents… webinar on development across scales

Posted by , on 6 November 2025

Our October webinar featured two early-career researchers working on development across scales. Here, we share the talks from Osvaldo Contreras (Victor Chang Cardiac Research Institute and UNSW) and Yinan Wan (Biozentrum, University of Basel).

Catch up on previous webinars and sign up to the Development presents… mailing list to learn about the upcoming webinars as they are announced.

Osvaldo Contreras (Victor Chang Cardiac Research Institute and UNSW)

Talk and Q&A

Yinan Wan (Biozentrum, University of Basel)

Talk and Q&A

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Beyond the beginning – development that lasts a lifetime

Posted by , on 4 November 2025

[Editorial from Development’s latest Special Issue – Lifelong Development: the Maintenance, Regeneration and Plasticity of Tissues, edited by Merixtell Huch and Mansi Srivastava.]

Development special issue cover showing colourful gills.

Traditionally, developmental biology has been considered the study of the embryo, and significant events such as metamorphosis or birth signify the pinnacle of development. However, we now better appreciate that development is a continuum and that – as in plants – developmental processes occur throughout the lifetime of an animal. Cell fate specification and differentiation, morphogenesis and patterning can continue after embryonic development; growth, degrowth, ageing, regeneration, and even reverse development (e.g. in some disease states) are just some examples of development-like processes occurring during the life history of a species. This special issue sought to draw these connections and to highlight how embryonic studies have revealed fundamental lifelong principles, advocating for a broader interpretation of developmental biology that circumvents restriction to specific stages in the life cycle.

The 26 research and review-type papers published in this issue illustrate this goal, including a breadth of mechanisms, research organisms and organ types. A selection of Research Articles demonstrates how several tissues and organs continue to develop, differentiate and mature during post-embryonic stages, establishing the principle of lifelong development. These examples include the mouse gut (Pan et al., 2025) and adipose tissue (Mahapatra et al., 2025), zebrafish vasculature (Preußner et al., 2025), and the Caenorhabditis elegans germline (Gupta et al., 2025). The mammalian nervous system represents a particularly well-studied example of postnatal refinement in response to sensory stimuli and learning. Therefore, we are glad to capture studies that discuss the ongoing development of retinal cells (Shah et al., 2025) and visual cortex (Xavier et al., 2025), microglia (Hammond et al., 2025), astrocytes (Iyer et al., 2025) and neurons (Liu et al., 2025). In addition to an extension of embryonic development, some tissues and organs undergo extensive remodelling during metamorphosis in invertebrates or puberty in humans (Rauner et al., 2025), and tissue-resident stem cells are crucial for the homeostasis and maintenance of adult tissues, which may also change behaviour over a lifespan due to shifting niche environments (Puri and Blanc, 2025).

Beyond these examples of post-embryonic development, regeneration offers perhaps the most striking illustration of development-like processes occurring in adults. We are therefore excited that regenerative studies are well represented in the special issue. Research papers characterise the initial molecular events and signalling in regeneration (Quinn et al., 2025), as well as the regeneration of specific tissues and organs, such as the zebrafish skin (Craig et al., 2025) and heart (Feng et al., 2025; Forman-Rubinsky et al., 2025). Whole-body regeneration is also explored in planarians, with studies revealing how these species maintain robust regenerative potential throughout life (Zelko et al., 2025), and the mechanisms by which polarity and patterning are re-established during regeneration (Anderson and Petersen, 2025; Miliard et al., 2025). In addition, our review-type content highlights a recent workshop from this field (Bayin et al., 2025), the interplay between vertebrate regeneration and the nervous system (Wakelin and Johnston, 2025; Tendolkar and Mokalled, 2025) and non-traditional model systems with remarkable regenerative potential (García-Arrarás et al., 2025). We are pleased that one of these organisms, the tapeworm, also features in a Research Article in the same issue (Nanista et al., 2025). Moreover, our Techniques and Resources articles provide valuable references for studying adult stages of highly plastic species (Temiz et al., 2025; Little et al., 2025), with a Hypothesis article exploring such phenotypic plasticity as the basis of complex developmental potential (Dardiry and Ikmi, 2025).

This special issue underscores the continuity of developmental processes across the lifespan from embryogenesis to regeneration, tissue maintenance and phenotypic plasticity. By linking classical developmental biology and emerging insights into post-embryonic and adult stages, we aim to broaden the field’s conceptual understanding of developmental biology. We hope you enjoy reading the issue and that it inspires further investigation of how developmental mechanisms operate beyond early life, adapt to environmental cues, and contribute to lifelong organismal plasticity. Development welcomes future submissions that explore these dynamic and evolving aspects of development across diverse systems and life stages.

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September in preprints

Posted by , on 31 October 2025

Welcome to our monthly trawl for developmental and stem cell biology (and related) preprints.

The preprints this month are hosted on bioRxiv – use these links below to get to the section you want:

Developmental biology

Cell Biology

Modelling

Tools & Resources

Research practice and education

Spotted a preprint in this list that you love? If you’re keen to gain some science writing experience and be part of a friendly, diverse and international community, consider joining preLights and writing a preprint highlight article.

Developmental biology

| Patterning & signalling

Tissue-wide, synchronous Erk oscillations time the segmentation of the zebrafish notochord

Priyom Adhyapok, James Norman, Michel Bagnat, Stefano Di Talia

Cellular NAD+ availability and redox state constrain developmental speed in the Drosophila eye

Nisha Veits, Yuting Guo, Jingjing He, Khalil Mazouni, Ivan Nemazanyy, Martin Bres, Cara Picciotto, Claire Mestdagh, Yan Yan, Francois Schweisguth

Cytoneme feedback ensures signaling specificity when multiple ligands converge on a common receptor

From Veits et al. This image is made available under a CC-BY 4.0 International license.

Akshay Patel, Molly Maranto, Hind Hitti, Sougata Roy

EBF1 regulates sensory establishment in the cochlea by positioning the medial boundary of the prosensory domain and restricting proliferation of the sensory progenitor population

Kathryn G. Powers, Joshua Hahn, Juliette Wohlschlegel, Olivia Bermingham-McDonogh

Morphogen-guided neocortical organoids recapitulate regional areal identity and model neurodevelopmental disorder pathology

Yuan-Chen Tsai, Hajime Ozaki, Xinyi Wang, Axel A. Almet, Isabel Fleming, Kaori Shiraiwa, Matthew Jung Min Noh, Caihao Nie, Sunnyana Trejo, Bret Kiyoshi Sugita, Jiya Dalal, Ruben Alberto Gonzalez, Briana De Jesus, Gregory Li-Min Chen, Michael J Gandal, Qing Nie, Momoko Watanabe

Rewired gene interactions during development of serially homologous appendages in male and female Drosophila

Amber M. Ridgway, Javier Figueras Jimenez, Beñat Yáñez Iturbe-Ormaeche, Maria D. S. Nunes, Alistair P. McGregor

Ectomesenchymal identity emerges via relief of Twist1 transcript destabilization

Lara C. Busby, Jessica R. Patrick, Luke W. Lyons, Megan L. Martik

Spatiotemporal proteomics reveals dynamic antagonistic gradients shaping signalling waves

Wilke H. M. Meijer, Virginia Andrade, Suzan Stelloo, Wouter M. Thomas, Marek J. van Oostrom, Eveline F. Ilcken, Kim T. J. Peters, Michiel Vermeulen, Katharina F. Sonnen

Bruce suppresses autophagy-regulated caspase activity and wing tissue growth in Drosophila

Natsuki Shinoda, Yutaro Hama, Nozomi Hanawa, Masayuki Miura

Vnd and En are expressed in orthogonal stripes and act in a brief competence window to combinatorially specify NB7-1 and its early lineage

Nathan Anderson, Sen-Lin Lai, Chris Q. Doe

Bendless-mediated K63 ubiquitination modulates cellular signalling to regulate Drosophila hematopoiesis

Asfa Kamal, Yash Sheregare, Chaitanya Patkar, Mrunmayi Markam, Rujul Deolikar, Nawaneetan Sriraman, Aditya Seth, Manish Jaiswal, Rohan Jayant Khadilkar

Notch coordinates self-organization of germ layers and axial polarity in cnidarian gastruloids

Sanjay Narayanaswamy, Franziska Haas, Emmanuel Haillot, Elly Tanaka, Ulrich Technau

The protein-tyrosine phosphatase Shp2 is essential for lymphatic endothelial cell differentiation in zebrafish

Daniëlle T.J. Woutersen, Andreas van Impel, Stefan Schulte-Merker, Jeroen den Hertog

A hormonally regulated gating mechanism controls EMT timing to ensure progenitor cell specification occurs prior to epithelial breakdown

Andrew T Plygawko, Jamie Adams, Zack Richards, Kyra Campbell

Figure from Plygawko et al. This image is made available under a CC-BY 4.0 International license.

Nodal/Smad2 signaling sustains developmental pausing by repressing Pparg-mediated lipid metabolism

Giacomo Furlan, S. Bryn Martin, Brandon Cho, Sarah A. McClymont, Elizabeth J. Robertson, Evelyne Collignon, Miguel Ramalho-Santos

Spatio-temporal control of myoblast identity drives muscle diversity in the Drosophila leg

Camille Guillermin, Violaine Tribollet, Mathilde Bouchet, Anne Laurencon, Dan Zhou, Sergio Sarnataro, Laurent Gilquin, Isabelle Stevant, Guillaume Marcy, Emeric Texeraud, Yad Ghavi-Helm, Benjamin Gillet, Sandrine Hughes, Samantha Vonau, Jonathan Enriquez

Rac1 inhibition slows down the segmentation clock and increases the somite size

Maria Pappa, Charisios D. Tsiairis

A systemic role of macrophage-derived BMP2/4 homolog Dpp in regulating sterol hormone synthesis under dietary stress

Sergio Juarez-Carreño, Marco Milán

Gene network switching provides a mechanistic basis for time-to-space translation in insect embryonic patterning

Mahla Ahmadi, Heike Rudolf, Christine Mau, Jimena Garcia-Guillen, Ezzat El-Sherif

Endothelial Slit2 guides the Robo1-positive sympathetic innervation during heart development

Juanjuan Zhao, Susann Bruche, Konstantinos Lekkos, Carolyn Carr, Joaquim M. Vieira, John G. Parnavelas, William D. Andrews, Mathilda T.M. Mommersteeg

Uncoupling Neocortical Neuron Fate and Migration via a Let-7–RBX2 Axis

Steven Decker, Keiko Hino, Anna La Torre, Sergi Simó

Canonical WNT signalling governs Echinococcus metacestode development

Ruth Herrmann, Luisa Schiegl, Michaela Herz, Kilian Rudolf, Akito Koike, Markus Spiliotis, Monika Bergmann, Nancy Holroyd, Uriel Koziol, Matt Berriman, Klaus Brehm

Vascular Patterning affects Intramembranous Ossification through HIF1α-Vegf Signaling

Soma Dash, Jonathan R. Rettig, Madelaine Gogol, Paul A. Trainor

Morphogen and juxtacrine signalling dynamically integrate to specify cell fates with single-cell resolution

Alicia Donoghue, Lewis S Mosby, Inês Lago Baldaia, Tamara Hodgetts, Evelina Ursu, Zeynep Erten, Zena Hadjivasiliou, Vilaiwan M Fernandes

Gli3R-mediated inhibition of hedgehog signaling alters the embryonic transcriptome in zebrafish

Anna J. Moyer, Summer B. Thyme

Integrated ERK, PKA, YAP/TAZ, and SHH Signaling Drives Cortical Lineage Diversification and Evolutionary Expansion

Zhuangzhi Zhang, Zhejun Xu, Tongye Fu,Jialin Li, Feihong Yang, Chuannan Yang, Wenhui Zheng, Zizhuo Sha, Yanjing Gao, Mengge Sun, Zhenmeiyu Li, Jing Ding, Xiaosu Li, Zhengang Yang

From Zhang et al. This image is made available under a CC-BY 4.0 International license.

The Wnt co-receptor Arrow-LRP5/6 is required for Planar Cell Polarity establishment in Drosophila

Ursula Weber, Reza Farhadifar, Marek Mlodzik

Cardiomyocyte-expressed TGFβ signals to fibroblasts to program early heart maturation and adult myocyte identity

Rachel A. Minerath, Rajesh K. Kasam, Casey O. Swoboda, Vikram Prasad, Kelly M. Grimes, N. Scott Blair, Hadi Khalil, Christina M Alfieri, Logan Eads, Anthony J. Saviola, Mohamad Azhar, Lianjie Miao, Mingfu Wu, Michelle Tallquist, Kirk C. Hansen, Matthew T Weirauch, Katherine E. Yutzey, Douglas P. Millay, Jeffery D. Molkentin

Chaperone AIP Couples mTORC1 Activation and Catabolic Metabolism During Neonatal Development

Márta Korbonits, Xian Wang, Sayka Barry, Chung Thong Lim, Oniz Suleyman, Stefano De Tito, Nazia Uddin, Maria Lillina Vignola, Charlotte Hall, Laura Perna, J. Paul Chapple, Gabor Czibik, Sian M Henson, Valle Morales, Katiuscia Bianchi, Viðar Örn Eðvarðsson, Kristján Ari Ragnarsson, Viktoría Eir Kristinsdóttir, Anne Debeer, Yoeri Sleyp, Rena Zinchenko, Glenn Anderson, Michael Duchen, Kritarth Singh, Chih Yao Chung, Yu Yuan, Sandip Patel, Artem O. Borovikov, Hans Tómas Björnsson, Hilde Van Esch, Sharon Tooze, Ezra Aksoy, Caroline Brennan, Oliver Haworth

Arabidopsis epigenetic factor AS2 attenuates nucleolar stress by camptothecin and establishes leaf polarity by repressing a CDK inhibitor

Ayami Nakagawa, Hidekazu Iwakawa, Hiro Takahashi, Simon Vial-Pradel, Mari Takahashi, Kazuomi Ohga, Takuma Ito, Motoki Tamai, Eri Takada, Sumie Keta, Nanako Ishibashi, Sayuri Ando, Iwai Ohbayashi, Masaki Ito, Mami Yamazaki, Byung-Yoon Cha, Je-Tae Woo, Michiko Sasabe, Munetaka Sugiyama, Shoko Kojima, Yasunori Machida, Chiyoko Machida

Dual-patterned pluripotent stem cells self-organize into a human embryo model with extended anterior-posterior patterning

Zukai Liu, Chengxiang Qiu, Connor A. Kubo, Stella Xu, Riza M. Daza, Eva Nichols, Wei Yang, Anh Vo, Mary B. O’Neill, Choli Lee, Jay Shendure, Nobuhiko Hamazaki

From Liu et al. This image is made available under a CC-BY 4.0 International license.

Regulation of mouse blastocyst primitive endoderm differentiation by p38-mitogen-activated-kinases (p38-MAPKs) is inner-cell-mass (ICM) autonomous and unrelated to cavity expansion defects in ICM specification

Martina Bohuslavová (née Stiborová), Andrea Hauserová, Rebecca Collier, Joaquin Lilao-Garzón, Silvia Muñoz-Descalo, Alexander W. Bruce

Cell autonomous polarization by the planar cell polarity signaling pathway

Alexis T Weiner, Silas Boye Nissen, Kaye Suyama, Bomsoo Cho, Gandhy Pierre-Louis, Jeffrey D Axelrod

E(spl)m4 Directly Antagonizes Traf4 to Inhibit JNK Signaling in Drosophila  Katrin Strobel, Jennifer Falconi, Cédric Leyrat, Rémi Logeay, Sarah J. Bray, Alexandre Djiane

| Morphogenesis & mechanics

Lineage domains and cytoskeletal cables organize a cellular square grid in a crustacean

Beatrice L. Steinert, Leo Blondel, Chandrashekar Kuyyamudi, Evangelia Stamataki, Anastasios Pavlopoulos, Cassandra G. Extavour

Self-organized fingering instabilities drive the emergence of tissue morphogenesis in digit organoids

Rio Tsutsumi, Antoine N. Diez, Steffen Plunder, Ryuichi Kimura, Shinya Oki, Kaori Takizawa, Haruhiko Akiyama, Yusuke Mii, Ritsuko Takada, Shinji Takada, Mototsugu Eiraku

Spatiotemporal cellular dynamics of the notochord shape intervertebral disc morphogenesis in the mouse embryo through apoptosis and proliferation

Julie Warin, Estelle Balissat, Pauline Colombier, Lily Paillat, Maeva Dutilleul, Anne Camus

Biophysical mechanisms of morphogenesis in lizard lungs

Kaleb Hill, Aaron H. Griffing, Michael A. Palmer, Bezia Lemma, Aria Lupo, Tony Gamble, Natalia A. Shylo, Andrej Košmrlj, Paul A. Trainor, Celeste M. Nelson

From Hill et al. This image is made available under a CC-BY 4.0 International license.

VANGL2 shapes the mouse heart tube from adjacent epithelia and without planar polarity

Paul Palmquist-Gomes, Gaëlle Letort, Ayushi U. Hegde, José María Pérez-Pomares, Sigolène M. Meilhac

LGL-1 and the RhoGAP protein PAC-1 redundantly control polarization of the C. elegans embryonic epidermal epithelium

Olga D. Jarosińska, Amalia Riga, Hala Zahreddine Fahs, Joren M. Woeltjes, Ruben Schmidt, Fathima S. Refai, Suma Gopinadhan, Kristin C. Gunsalus, Mike Boxem

Tartrate-resistant acid phosphatase (TRAP/ACP5) sex-specifically regulates bone maintenance in old mice, but the anabolic effects of mechanical loading is regulated in a sex-independent way

Bhavik Rathod, Jasmine Samvelyan, Nicole Gustafsson, Aneta Liszka, Narelle McGregor, Jianyao Wu, Claes Ohlsson, Anna Fahlgren, Natalie Sims, Jonas Fuxe, Göran Andersson, Jessica J Alm, Sara H Windahl

Human-mouse cross-species comparison identifies common and unique aspects of intestinal mesenchyme development

Kelli Johnson, Xiangning Dong, Zhiwei Xiao, Hamza Islam, Meghan Anderman, Ian Glass, Jason R. Spence, Katherine D. Walton

Functionally Essential and Structurally Diverse: Insights into the zebrafish Left-Right Organizer’s Cilia via Optogenetic IFT88 Perturbation and Volume Electron Microscopy

Favour Ononiwu, Melissa Mikolaj, Christopher Dell, Abdalla Wael Shamil, Kedar Narayan, Heidi Hehnly

Critical phenomenon underlies de novo luminogenesis during mammalian follicle development

Kim Whye Leong, Yuting Lou, Arikta Biswas, Jue Yu Kelly Tan, Boon Heng Ng, Xixun Lu, Xin Ping Joan Teo, Thong Beng Lu, Carlo Bevilacqua, Isabelle Bonne, Robert Prevedel, Tetsuya Hiraiwa, Chii Jou Chan

Distinct dermal fibroblasts direct mechano-chemical signaling to the epidermis during pregnancy

Yoshihiko Kobayashi, Kazunori Sunadome, Koichiro Maki, Hiroki Fukunaga, Hitomi Matsubara, Sahomi Ohkubo, Ritsuko Maki, Maki Yoshikawa, Aleksandra Tata, Purushothama Rao Tata, Ken-ichi Matsumoto, Taiji Adachi, Mitsuhiro Iwaki, Takuya Yamamoto, Fumiko Toyoshima

Patterned integrin–laminin adhesion coordinates epithelial collective cell migration

Anna Mertens, Nicola Moratscheck, Petra A Klemmt, Chaitanya Dingare, Marion Basoglu, Virginie Lecaudey

Single-cell morphodynamics predict cell fate decisions during mucociliary epithelial differentiation

Mari Tolonen, Ziwei Xu, Ozgur Beker, Varun Kapoor, Bianca Dumitrascu, Jakub Sedzinski

Under Pressure: A unique mechanoresponsive mechanism of body site-specific keratin regulation in palmoplantar epidermis

Sarah N. Steiner, Eric Horst, Mitre Athaiya, Craig N. Johnson, Joseph Y. Shen, Michelle L. Kerns, Geeta Mehta, Ramiro Iglesias-Bartolome, Pierre A. Coulombe

Sequoia affects Drosophila central nervous system development by regulating axonal extension and guidance

Noor Al-Hajri, Mar Alujas, Sofia J. Araújo, Guy Tear 

From Al-Hajri et al. This image is made available under a CC-BY 4.0 International license.

Sox2 Regulates Lateral Line Morphogenesis via Yap/Taz-Mediated Mechanotransduction

Akshai Janardhana Kurup, Aya Mikdache, Patricia Diabangouaya, Gwendoline Gros, Camila Garcia-Baudino, Cristian A. Undurraga, Andres F. Sarrazin, Pedro P. Hernandez

Cell Proliferation and Morphogenetic Compartmentalization in the Phoronid Phoronopsis harmeri: Conserved and Derived Patterns

Evgeny G. Ivashkin, Olga I. Taimanova, Anton I. Bogomolov, Elena N. Temereva

A structural transition ensures robust formation of skeletal muscle

Mario A. Mendieta-Serrano, Yiqi Hou, Sophie Theis, Thomas E. Hall, Shannon E. Taylor, Berta Verd, Robert G. Parton, Timothy E. Saunders

From Mendieta-Serrano et al. This image is made available under a CC-BY 4.0 International license.

Dynamic expression and differential requirement of the myocyte fusogen Myomixer during distinct myogenic episodes in the zebrafish

Sunandan Dhar, Serena Thomas, Hui Li Yeo, Timothy E. Saunders, Sudipto Roy

Motile cilia spin the Reissner fiber, a tensioned and anchored extracellular thread essential for body morphogenesis

Elizabeth A. Bearce, Samuel G. Bertrand, Samara Williams, Sophie I. Fisher, Adamend L. Freda, Zoe H. Irons, Calvin Chmelir, Daniel T. Grimes

A self-limiting mechanotransduction feedback loop ensures robust organ formation

Yusuke Mori, Paul Robin, Anne Belle Briggs, Daniel S. Levic, Jiacheng Wang, Kira L. Heikes, Michel Bagnat, Edouard Hannezo, Akankshi Munjal

Dynamics of bicoid mRNA localisation and translation dictate morphogen gradient formation

T. Athilingam, E.L. Wilby, P. Bensidoun, A. Trullo, M. Verbrugghe, X. Shi, M. Lagha, T.E. Saunders, T.T. Weil

Roles of K-channel activity in feather bud morphogenesis

Madison Zitting, Zhou Yu, Ting-Xin Jiang, Ping Wu, Randall Widelitz, Cheng-Ming Chuong, Robert Hsiu-Ping Chow

| Genes & genomes

Aldehyde dehydrogenase protein: a placental glycogen trophoblast marker suitable to monitor placental pathologies in mouse models

Alka Rani, Melissa Arboleda, Heidi Stuhlmann

The Drosophila ovarian terminal filament imports molecules needed for lipid droplets, the fusome, and functional germ cells

Bhawana Maurya, Allan C Spradling

Integrated transcriptomic analysis reveals a metabolically quiescent state and gene expression networks related to intermediate and mature human 8-cell stage embryo resembling cells in vitro

Pauliina Paloviita, Sonja Nykänen, Sanna Vuoristo

Single-cell transcriptomic profiling of C. elegans Q neuroblast lineage during migration and differentiation

Felipe L. Teixeira, Brian Sanderson, Jennifer L. Hackett, Erik A. Lundquist

Active maintenance of meiosis-specific chromosome structures in C. elegans by the deubiquitinase DUO-1

Liesl G. Strand, Charlotte P. Choi, Savannah McCoy, Emmanuel T. Nsamba, Nicola Silva, Anne M. Villeneuve

From Strand et al. This image is made available under a CC-BY-NC 4.0 International license.

AMP accumulation during mitochondrial stress induces transcription of cytosolic and mitochondrial protein synthesis components via NHR-180

Avijit Mallick, Theresa Ramalho, Yunguang Du, Rui Li, Levi Ali, Sookyung Kim, Pooja Rai, Andreas Bergmann, Lihua Julie Zhu, Cole M. Haynes

Neural crest induction requires SALL4-mediated BAF recruitment to lineage specific enhancers

Martina Demurtas, Samantha M. Barnada, Emma van Domselaar, Zoe H. Mitchell, Laura Deelen, Marco Trizzino

Editing-independent effects of Adar in Drosophila melanogaster

Khadija Hajji, Damiano Amoruso, Barbora Nováková, Nagraj Sambrani, Deying Yang, Anzer Khan, Vojtech Bystry, Alejandro Medaglia-Mata, Domenico Alessandro Silvestris, Ernesto Picardi, Mary A. O’Connell, Liam P. Keegan

Expression Atlas Of Dmrt Genes Across Sex And Development – Functional Insights From The Mouse Olfactory System

Rafael Casado-Navarro, Ana Bermejo-Santos, Rodrigo Torrillas-de la Cal, María Pilar Madrigal, Virgilia Olivé, Li Ying Chen-Chen, Sonia Amorós-Bru, Sandra Jurado, Esther Serrano-Saiz

Single-cell-scale spatial transcriptome of the developing and adult mouse ovary

Anthony S. Martinez, Tyler J. Gibson, Jennifer McKey

Decoding the Spatial and Epigenetic Logic of Early Skin Development

Nigel L. Hammond, Syed Murtuza Baker, Amanda McGovern, Antony Adamson, Andrew D Sharrocks, Magnus Rattray, Jill Dixon, Michael J. Dixon

Nicotinamide opposes ET-1’s adverse effect on uterine decidualization via EDNRB

Yuye Wang, Qing Ma, Meitong Chen, Yukako Kayashima, Jiayi Zhou, Balaji Rao, Jessica L Bowser, Xianwen Yi, Nobuyo Maeda-Smithies, Feng Li

Foxh1 is a locus-specific PRC2 recruiter governing germ layer silencing

Jin Cho, Clark L. Hendrickson, Nathan Mar, Ira L. Blitz, Margaret Fish, Wenqi Wang, Ken W.Y. Cho

From Cho et al. This image is made available under a CC-BY 4.0 International license.

Dissecting Gene Regulatory Networks Governing Human Cortical Cell Fate

Jingwen W. Ding, Chang N. Kim, Megan S. Ostrowski, Yashodara Abeykoon, Bryan J. Pavlovic, Jenelle L. Wallace, Tomasz J. Nowakowski, Alex A. Pollen

eIF4E assembly into C. elegans germ granules is essential for its repressive function

Carmen Herrera Sandoval, Christopher Borchers, Boyoon Yang, Becky Boyd, Heather A. Hundley, Scott T. Aoki

Resf1 is required for proper placental development and configuration of trophoblast cell-specific heterochromatin

Kei Fukuda, Kimiko Inoue, Chikako Shimura, Moe Kitazawa, Michiko Hirose, Shogo Matoba, Atsuo Ogura, Yoichi Shinkai

Ovarian development is driven by early spatiotemporal priming of the coelomic epithelium

Cyril Djari, Chloé Mayère, Maëva Guy, Aitana Perea-Gomez, Paul Barreau, Agathe Rozier, Anthony S. Martinez, Tyler J. Gibson, Cassandre Guérin, Herta Ademi, Dagmar Wilhelm, Jennifer McKey, Marie-Christine Chaboissier, Serge Nef

The Fd4 transcription factor translates transient spatial cues in progenitors into long-term lineage identity

Sen-Lin Lai, Chris Q. Doe

Human NKX2.2 influences islet endocrine cell fate choices through regulation of WNT pathway genes

Christopher Schaaf, Fiona M. Docherty, Madison X. Rodriguez, Patrick Sean McGrath, Christopher J. Hill, Kristen L. Wells, Lori Sussel

From Schaaf et al. This image is made available under a CC-BY 4.0 International license.

A novel CHD4-CTCF regulatory axis drives key developmental programs and transitions in male germ cells

Rodrigo O. de Castro, Agustin Carbajal, Katarzyna P. Nowak, Ayelén González Montoro, Monika Kawecka, Luciana Previato, Roberto J. Pezza

SPT5 regulates Pol II pausing and elongation in different ways at early versus late embryonic stages

Alessandro Dulja, Marvin Mayer, Niklas Engel, Arkadiy K. Golov, Mattia Forneris, Yacine Kherdjemil, Songjie Feng, Rebecca R. Viales, Eileen E.M. Furlong

EHMT2 Controls Neural Crest-Derived Craniofacial Development but is Dispensable in Limb Development

Ye Liu, Yaguang Zhao, Minmin Liu, Paul Kim, Ji Liao, Di Lu, Huadie Liu, Piroska E. Szabó, Tao Yang

Transcriptomic and proteomic dynamics of ovarian follicle group culture resemble in vivo folliculogenesis

Andrea S. K. Jones, D. Ford Hannum, Taylor Schissel, Jordan H. Machlin, Vasantha Padmanabhan, Jun Z. Li, Ariella Shikanov

The genetic basis for DNA methylation variation across tissues and development

Jonathan Rosenski, Ofra Sabag, Eitan Marcus, Netanel Loyfer, Yuval Dor, Howard Cedar, Tommy Kaplan

Trimodal Single-Cell Gene Regulatory Networks Reveal Principles of Stemness Loss and Cell Fate Acquisition in Human Hematopoiesis

Carmen G. Palii, Steven Tur, Sirui Yan, William J.R. Longabaugh, Romeo Solano, F. Jeffrey Dilworth, Jeffrey A. Ranish, Marjorie Brand

An unbiased survey of distal element-gene regulatory interactions with direct-capture targeted Perturb-seq

Judhajeet Ray, Evelyn Jagoda, Maya U. Sheth, James Galante, Dulguun Amgalan, Andreas R. Gschwind, Chad J. Munger, Jacob Huang, Glen Munson, Madeleine Murphy, Eugenio Mattei, Timothy Barry, Vasundhara Singh, Aarthee Baskaran, Helen Kang, Eugene Katsevich, Lars M. Steinmetz, Jesse M. Engreitz

Resetting of H3K4me2 during mammalian parental-to-zygote transition

Chong Wang, Yang Li, Yaqian Wang, Yong Shi, Xiangrui Meng, Wenbo Li, Jia Guo, Kaiyue Hu, Hao Chen, Jiawei Xu

Nucleosome stability safeguards cell identity, stress resilience and healthy aging

Hiroshi Tanaka, Brenna S. McCauley, Clara Guida, Xue Lei, Sha Li, Tatiana M. Moreno, K’leigh Guillotte, Zong-Ming Chua, Adrianna Abele, Aashna Lamba, Rouven Arnold, Adarsh Rajesh, Marcos G. Teneche, Laurence Haddadin, Anagha Deshpande, Aniruddha J. Deshpande, Alexandre Colas, Caroline Kumsta, Michael Petrascheck, Rolf Bodmer, Weiwei Dang, Peter D. Adams

From Tanaka et al. This image is made available under a CC-BY 4.0 International license.

Transcriptional Readthrough at Atf4 Locus Suppresses Rps19bp1 and Impairs Heart Development

Zengming Zhang, Tongbin Wu, Zeyu Chen, Danni Chen, Zhengyu Liang, Christopher Adams, Yu Gu, Mao Ye, Fhujjen Barroga, Sylvia Evans, Xiaohai Zhou, Ju Chen

| Stem cells, regeneration & disease modelling

Nonsense, but not frameshift, truncating mutations result in Cyclin D2 stabilisation in an induced pluripotent stem cell model of MPPH

Erica L. Harris, Rowan D. Taylor, Katarzyna Szymanska, Ailsa M.S. Rose, Jacquelyn Bond, Colin A. Johnson, James A. Poulter

Rejuvenation-Responsive and Senolytic-Sensitive Muscle Stem Cells Unveiled by CD200 and CD63 in Geriatric Muscle

Ye Lynne Kim, Young-Woo Jo, Takwon Yoo, Kyusang Yoo, Ji-Hoon Kim, Myungsun Park, In-Wook Song, Hyun Kim, Yea-Eun Kim, Sang-Hyeon Hann, Jong-Eun Park, Daehyun Baek, Young-Yun Kong

Short-term exposure to culture media used in human ART shapes early calcium oscillations in ICSI-fertilized mouse oocytes and impacts adult phenotype

Bernadette Banrezes, Thierry Sainte Beuve, Anne Frambourg, Alice Jouneau

Differentiation stage-specific use of cap-independent and cap-dependent translation initiation in hematopoiesis

Michael C. Mazzola, Ting Zhao, Anna Kiem, Trine A. Kristiansen, Karin Gustafsson, Lai Ping Wong, Emily Scott-Solomon, Marissa D. Fahlberg, Sarah Forward, Emane Rose Assita, Giulia Schiroli, Maris Handley, Youmna Kfoury, Tsuyoshi Fukushima, Samuel Keyes, Azeem Sharda, Jelena Milosevic, Hiroki Kato, Pavel Ivanov, David B. Sykes, Sheldon J. J. Kwok, Ruslan I Sadreyev, Vijay G. Sankaran, Ya-Chieh Hsu, David T. Scadden

Vcam1 in endothelial and stromal cells regulates hematopoietic stem cell contact with the niche

Octavia Santis Larrain, Alice Alhaj Kadour, Sobhika Agarwala, Wantong Li, Bradley W. Blaser, Michael R. Lasarev, Roxana Alexandridis, Anthony Veltri, Khaliun Enkhbayar, Elliott J. Hagedorn, Owen J. Tamplin

A kidney specific mouse model to study the effects of in vivo induction of Yamanaka factors

Katharina Lemberg, Gijs A.C. Franken, Korbinian M. Riedhammer, Selina Hölzel, Kirollos Yousef, Kraisoon Lomjansook, Gina Kalkar, Caroline M. Kolvenbach, Daniel Marchuk, Elena Zion, Ken Saida, Florian Buerger, Friedhelm Hildebrandt

Natural killer cell TGF-β signaling regulates senolytic activity and vascular patterning in the postnatal lung

Declan J. Gainer, Kassandra M. Coyle, Matthew T. Rätsep, Douglas Quilty, Brian Tran, Sofia Skebo, M. Martin VandenBroek, Kimberly L. Laverty, Yupu Deng, Shawyon P. Shirazi, Hugh JM Brady, Jennifer M.S. Sucre, Eric Vivier, Niraj Shrestha, Hing C. Wong, Duncan J Stewart, Nicolle J. Dominik, Mark L. Ormiston

JARID2 Inhibition Reprograms Human Hematopoietic Progenitor Cells To Enhance Bone Marrow Transplantation

Wentao Han, Hassan Bjeije, Hamza Celik, Michael Rettig, Nancy Issa, Andrew L. Young, Yanan Li, Infencia Xavier Raj, Christine R. Zhang, Aishwarya Krishnan, Tyler M. Parsons, Samantha C. Burkart, Jason Arand, Wei Yang, Jeffrey A. Magee, Grant A. Challen

Human pluripotent stem cell-derived atrioventricular node-like pacemaker cells exhibit biological conduction bridge properties in vitro and in vivo

Michelle Lohbihler, Amos A. Lim, Stéphane Massé, Maggie Kwan, Omar Mourad, Olya Mastikhina, Brandon M. Murareanu, Malak Elbatarny, Renu Sarao, Beiping Qiang, Wahiba Dhahri, Matthew L. Chang, Alice L.Y. Xu, Amine Mazine, Shahryar Khattak, Sara S. Nunes, Kumaraswamy Nanthakumar, Michael A. Laflamme, Stephanie Protze

Glucocorticoid and Mineralocorticoid Receptors Jointly Promote Vascular Development in Kidney Organoids

Cory P. Johnson, Hannah M. Somers, Sophie E. Craig, Heath Fuqua, Lynne Beverly-Staggs, Kailee E. Tanaka, Sydney M. Brown, Charles H. Toulmin, Matthew D. Cox, Joel H. Graber, Melissa S. Maginnis, Hermann Haller

Resolving hematopoietic stem versus progenitor cell potential in the mouse dorsal aorta by differential Runx1 +110 enhancer activity

Giorgio Anselmi, Vincent Frontera, Christina Rode, Andrew Jarratt, Naeema T. Mehmood, Matthew Nicholls, Stella Antoniou, Emanuele Azzoni, John Stamatoyannopoulos, Ditsa Levanon, Yoram Groner, Marella F.T.R. de Bruijn

Hypoxia/HIF Signaling Negatively Regulates Bone Marrow Adiposity after Radiation Exposure

Cheyenne A. Jones, Wendi Guo, Kiana A. Gunn, Cahil Potnis, Amaya Sheffield, Colleen Wu

Exploring mechanisms of scar-free skin wound healing in adult zebrafish in comparison to mouse

İsmail Küçükaylak, Francisco Javier Martínez Morcillo, Kai Halwas, Nils Reiche, Manuel Metzger, Petra Comelli, Jürgen Brinckmann, Sabine Eming, Matthias Hammerschmidt

Hic2 fast-tracks iPS cell generation by suppressing KLF4-dependent epidermal detour

Meryam Beniazza, Masahito Yoshihara, Daniel F Kaemena, James Ashmore, Suling Zhao, Michael O’Dwyer, Emil Andersson, Victor Olariu, Shintaro Katayama, Abdenour Soufi, Kosuke Yusa, Keisuke Kaji

From Beniazza et al. This image is made available under a CC-BY-NC 4.0 International license.

Smed-pou4-2 regulates mechanosensory neuron regeneration and function in planarians

Ryan A. McCubbin, Mohammad A. Auwal, Shengzhou Wang, Sarai Alvarez Zepeda, Roman Sasik, Robert W. Zeller, Kelly G. Ross, Ricardo M. Zayas

Chondrolectin regulates the sublaminar localization and regenerative function of muscle satellite cells in mice

Lijie Gu, Kun Ho Kim, Xiyue Chen, Stephanie N Oprescu, Yufen Li, Junxiao Ren, Shihuan Kuang, Feng Yue

Signals from the head and germinative region differentially regulate regeneration competence of the tapeworm Hymenolepis diminuta

Elise McCollough Nanista, Landon Elizabeth Poythress, Isabell Reese Skipper, Trevor Haskins, Marieher Felix Cora, Tania Rozario

Microbes and diet reshape the intestine via distinct cellular dynamics

Alessandro Bonfini, Nicolas Buchon

Hyper-proliferation of Adipose Progenitors During Developmental Adipogenesis Programs Higher Adipocyte Number and Early-onset Obesity in Offspring Born to Obese Dams

TB Scheidl, JS Yoon, JL Wager, S Yonan, A Lakhdar, S Kailasam, JA Thompson

A double-assurance mechanism restrains generation of high potential transit-amplifying progenitors during neurogenesis

Cyrina M. Ostgaard, Arjun Rajan, Sophia R. Davidson, Cheng-Yu Lee

Tumors mimic the niche to inhibit neighboring stem cell differentiation

Yang Zhang, Yuejia Wang, Jinqiao Song, Lizhong Yan, Ziguang Wang, Dongze Song, Yudi Zhao, Shaowei Zhao

The circadian regulator PER1 inhibits osteoclastogenesis by activating inflammatory genes

Nobuko Katoku-Kikyo, Elizabeth K. Vu, Samuel Mitchell, Ismael Y. Karkache, Elizabeth W. Bradley, Nobuaki Kikyo

Myc and Tor drive growth and cell competition in the regeneration blastema of Drosophila wing imaginal discs

Felicity Ting-Yu Hsu, Rachel Smith-Bolton

Piezo1–Yap1 signalling translates tissue mechanics into regenerative cell states

Fernando Ferreira, Jaime A. Espina, Artemis G. Korovesi, Inês A. Ferreira, Quentin Tirel, Elias H. Barriga

WDR5 and Myc Cooperate to Regulate Formation of Neural Crest Stem Cells

Karlin Compton, Elizabeth Barter, Carole LaBonne

A STAT3-regulated lncRNA integrates microRNA biogenesis and sequestration to safeguard naïve pluripotency

Vincent Giudice, Florence Perold, Yannicke Pijoff, Nathalie Doerflinger, Nicolas Allègre, Claire Chazaud, Irène Aksoy, Pierre Savatier, Pierre-Yves Bourillot

The livebearers platyfish and swordtails partially regenerate their hearts with persistent scarring

Vincent Hisler, Lana Rees, Simon Blanchoud, Heidi E.L. Lischer, Rémy Bruggmann, Anna Jaźwińska

Regional Signaling Controls Stem Cell-Mediated Regeneration in an Invertebrate Chordate

Tal Gordon, Tom Levy, Chester Jiamu Yu, Benyamin Rosental, Lauren Lubeck, Lucia Manni, Irving L. Weissman, Ayelet Voskoboynik

Maternal–fetal inflammation affects Cdh1/E-cadherin epigenetic regulation and craniofacial development

Diogo Nani, Lucas Alvizi, Heloisa Maria de Siqueira Bueno, Ellen Cristina Miranda Lacerda, Maria Rita Passos-Bueno

Blocking apoptosis promotes survival and alters developmental dynamics of human retinal ganglion cells in retinal organoids

Jingliang Simon Zhang, Brian Guy, Clayton P. Santiago, Caterina Tiozzo, Meghana Sreenath, Ya-Wen Chen, Seth Blackshaw, Robert J. Johnston Jr.

Accelerated Tempo of Cortical Neurogenesis in Down Syndrome

Jingwen W Ding, Chang N Kim, Marilyn R Steyert, Andrew T Yuan, David Shin, Dimitar Ivanov, Tomasz J Nowakowski, Alex A Pollen

Reprogramming Factors Activate a Non-Canonical Oxidative Resilience Pathway That Can Rejuvenate RPEs and Restore Vision

Yuancheng Ryan Lu, James C. Cameron, Yan Hu, Han Shen, Shintaro Shirahama, Alexander Tyshkovskiy, Zhaoyi Chen, Jiahe Ai, Daniel Y. Zhu, Margarete M. Karg, Lindsey A. Chew, George W. Bell, Siddhartha G. Jena, Yue He, Philip Seifert, Daisy Y. Shu, Mohamed A. EI-Brolosy, Qiannuo Lou, Bohan Zhang, Anna M. Puszynska, Xiaojie Qiu, Xiao Tian, Meredith Gregory-Ksander, Vadim N. Gladyshev, David A. Sinclair, Magali Saint-Geniez, Jason D. Buenrostro, Catherine Bowes Rickman, Bruce R. Ksander, Jonathan S. Weissman

Germline stem cell isolation, lineage tracing, and aging in a protochordate

Tom Levy, Chiara Anselmi, Katherine J. Ishizuka, Tal Gordon, Yotam Voskoboynik, Erin McGeever, Angela M. Detweiler, Liron Levin, Karla J. Palmeri, Daniel Dan Liu, Rahul Sinha, Benjamin F. Ohene-Gambill, Tal Raveh, Maurizio Morri, Virginia Vanni, Lucia Manni, Debashis Sahoo, Norma F. Neff, Benyamin Rosental, Irving L. Weissman, Ayelet Voskoboynik

RNA helicase Ddx21 safeguards fetal HSPC expansion by recruiting Kdm5a to epigenetically sustain ribosomal and hematopoietic gene transcription

Adrian On-Wah Leung, Chang Li, Xianyin Huang, Zhuming Fan, Yuning Chen, Jiaxing Liu, Hong-Man Lin, Xiaoming Cui, Fujia Zhang, Ruoxi Niu, Kam-Tong Leung, Hoi-Hung Cheung

Inhibition of the neurodevelopmental disorder-associated 16p11.2 gene QPRT leads to altered cell type distribution in human stem cell-derived cerebral organoids

Julia Schwarzpaul, Clara M. Droell, Afsheen Kumar, Harishny Sarma, Madeleine Gruenauer, Selen Z. Ucar, Julio C. Hechavarría, Andreas G. Chiocchetti, Denise Haslinger

Sonoepigenetic Modification Mechanoprimes Early Osteogenic Commitment in Mesenchymal Stem Cells

Lizebona A. Ambattu, Blanca del Rosal, Carmelo Ferrai, Leslie Y. Yeo

Setdb1 safeguards proper differentiation of adult intestinal stem cells by controlling chromatin accessibility and transcriptome variability

Ioanna Peraki, Ioannis K. Deligiannis, Dimitris Botskaris, Marianna Stagaki, Haroula Kontaki, Elena Deligianni, Giannis Giannoulakis, Matthieu D. Lavigne, Celia P. Martinez-Jimenez, Iannis Talianidis

| Plant development

Molecular characterization of capulet2 reveals the importance of ANAPHASE PROMOTING COMPLEX 6 maternal expression in endosperm development

Yuri S. van Ekelenburg, Ida V. Myking, Cathal Meehan, Morten P. Hauger, Shinichiro Komaki, Keiko Sugimoto, José Gutierrez-Marcos, Paul E. Grini

De novo meristem development in Marchantia requires light and an apical auxin minimum

Eva-Sophie Wallner, Natalie Edelbacher, Liam Dolan 

Supergene control of chiral development in mirror-image flowers
Haoran Xue, Marco Saltini, Nicola Illing, Kelly Shepherd, Olivia Page-Macdonald, Oliver Marketos, Caroline Robertson, Anand Shankar, Sarah Süß, Christian Kappel, Saleh Alseekh, Eva E. Deinum, Robert A. Ingle, Michael Lenhard

The role of FRUITFULL controlling cell cycle during early flower development revealed by time series snRNA-seq experiments

Peilin Chen, Xiaocai Xu, Cezary Smaczniak, Bénédicte Desvoyes, Crisanto Gutiérrez, Robert Sablowski, Kerstin Kaufmann, Jose M Muino

Transgenerational polarity axis inheritance during Ceratopteris embryogenesis

Sjoerd Woudenberg, Andrew R.G. Plackett, Zhaodong Hao, Hidemasa Suzuki, Luis Alonso Baez, Cecilia Borassi, Thorsten Hamann, Minako Ueda, Jane A. Langdale, Joris Sprakel, Jasper van der Gucht, Dolf Weijers

COCHLEATA controls spatial regulation of cytokinin and auxin during nodule development

Karen Velandia, Muhammad Nouman Sohail, Tiana Scott, Alejandro Correa-Lozano, Alannah Mannix, Eloise Foo

Transfer RNA modifications during rhizome development in Oryza longistaminata

Wenze Li, Guangzhao Yang, Haoyue Xue, Ruichen Ma, Chaoying Zhang, Ruixuan Yao, Yajun Li, Xukai Li, Fengyi Hu, Peng Chen, Zheng Li

A common pathway controls cell size in the sepal and leaf epidermis leading to a non-random pattern of giant cells

Frances K. Clark, Gauthier Weissbart, Xihang Wang, Kate Harline, Chun-Biu Li, Pau Formosa-Jordan, Adrienne H. K. Roeder

A symbiotic MLO gene regulates root development via RALF34-triggered Ca2+ signalling in Lotus japonicus

Filippo Binci, Giacomo Guarneri, Sofía Cristina Somoza, Filippo Vascon, Arianna Capparotto, Edoardo Di Nuzzo, Giacomo Rago, Laura Cendron, Lorella Navazio, Marco Giovannetti

Progressive oxygenation of developing leaves directs morphogenesis

Gabriele Panicucci, Vinay Shukla, Viktoriia Voloboeva, Leonardo Jo, Kees van Kollenburg, Sara Buti, Laura Dalle Carbonare, Francesco Licausi, Daan A. Weits

Transcriptional cofactor AtSDR4L and its paralog DIG2 repress somatic embryogenesis during post-embryonicdevelopment in Arabidopsis

Dongeun Go, Bailan Lu, Liang Song

A Key Role for S-Nitrosylation in Immune Regulation and Development in the Liverwort Marchantia polymorpha

Nadra Tabassum, Justin Goodrich, Gary J. Loake

| Environment, evolution and development

Expanding the fly eye gene regulatory network: from Drosophila to the hoverfly Episyrphus balteatus

T. Navarro, J. Torres, R. Sáez-Moreno, G. Guerrero, I. Almudí, A. Iannini, J. Figueras, K Wotton, S. Aerts, F. Casares

Oogenesis and germinal bed morphology of the brown anole (A. sagrei)

Bonnie K. Kircher, Antonia Weberling, Erin J. Vance, Natalia A. Shylo, Katherine Starr, Zoe B. Griffin, Hannah Wilson, Melainia McClain, Florian Hollfelder, Suzannah A. Williams, Thomas J. Sanger, Richard R. Behringer, Paul A. Trainor

doi:

Getting a head start: Craniofacial heterochrony in marsupials involves dynamic changes to molecular and cellular mechanisms underlying neural crest development

Axel H Newton, Ella R Farley, Andrew T Major, Jennifer C Hutchison, Ben M Lawrence, Karen E Sears, Marilyn B Renfree, Aiden M C Couzens, Geoff Shaw, Sara Ord, Richard A Schneider, Andrew J Pask

The heterochronic activation of TGF-β signaling drives the diversity of the avian sterna

Seung June Kwon, Zhaonan Zou, Mizuki Honda, Shiro Egawa, Shinya Oki, Yuji Atsuta

WntA expression and wing transcriptomics illuminate the evolution of stripe patterns in skipper butterflies

Jasmine D. Alqassar, Teomie S. Rivera-Miranda, Joseph J. Hanly, Christopher R. Day, Silvia M. Planas Soto-Navarro, Paul B. Frandsen, Riccardo Papa, Arnaud Martin

Integrated Genomic and Methylome Profiling Reveals Promoter Repression and Age-Linked CpGs in the California Mussel

Laurel S. Hiebert, Ava Soesbe, Tzung-Fu Hsieh, Qirui Cui, Soojin V. Yi

The evolution of investment in innate-like and diversified T cell receptors across development

Reese A. Martin, Anna E. Savage, Ann T. Tate

Rewiring of chromatin regulation underlies the evolution of brown algal multicellularity

Jeromine Vigneau, Jaruwatana Sodai Lotharukpong, Pengfei Liu, Remy Luthringer, Bérangère Lombard, Damarys Loew, Fabian B. Haas, Michael Borg, Susana M Coelho

 From Vigneau et al. This image is made available under a  CC-BY-NC 4.0 International license.

Developmental temperature drives distinct transcriptomic responses to acute temperatures and correlated differences in thermal tolerance

Alison Hall, Manali Rege-Colt, Melissa Pespeni

PIF4-mediated regulation of H2O2 homeostasis controls Arabidopsis seedling thermomorphogenesis

Ritesh Kumar Raipuria, Kumud Saini, Mahesh Kumar Panda, Aditi Dwivedi, Aashish Ranjan

Cell Biology

Separately prestored proteasome components to prevent polyspermy

Liying Wang, Chao Liu, Xing Wang, Yueshuai Guo, Qiuxing Zhou, Yinghong Chen, Huafang Wei, Xiaoming Huang, Shuai Liu, Wei Li, Chun So, Ling Sun, Renjie Jiao, Xuejiang Guo, Qiang Guo, Wei Li

Mitochondrial organization in the developing proximal tubule is controlled by LRRK2

Mohsina Anjum Khan, Kyle Bond, Elyse Grilli, Daniel Cameron, Liyang Zhao, Sunder Sims-Lucas, Andrew P. McMahon, Thomas J. Carroll, Leif Oxburgh

Mitochondrial fission regulates ROS for ventral furrow formation in Drosophila gastrulation

Somya Madan, Sayali Chowdhary, Sakshi Phalke, Harsh Mittal, Manos Mavrakis, Richa Rikhy

DISC1-PML protein interaction for congenital CMV infection-induced cortical neural progenitor deficit: perturbance of host signaling via viral IE1

Atsushi Saito, Stephanie Tankou, Kazuhiro Ishii, Makiko Sakao-Suzuki, Edwin C. Oh, Hannah Murdoch, Ho Namkung, Sunday Adelakun, Keiko Furukori, Masahiro Fujimuro, Paolo Salomoni, Gerd G. Maul, Gary S. Hayward, Qiyi Tang, Robert H. Yolken, Miles D. Houslay, Nicholas Katsanis, Isao Kosugi, Kun Yang, Atsushi Kamiya, Koko Ishizuka, Akira Sawa

Oocyte surface proteins EGG-1 and EGG-2 are required for eggshell integrity in Caenorhabditis elegans

Ji Kent Kwah, Shannon Pfeiffer, Mst Gitika Khanom, Aimee Jaramillo-Lambert

Mitochondria-Lysosome Crosstalk Shapes Metabolic Transition in Neonatal Enterocytes

Gonzalo Herranz, Diego Alonso-Larre, Tamara González, Laura Akintche, Alejandra Ramos-Manzano, Marta Iborra-Pernichi, María Velasco de la Esperanza, Covadonga Díaz-Díaz, Ian G Ganley, Patricia Boya, Sara Cogliati, Nuria Martínez-Martín, Fernando Martín-Belmonte

ANKRD5: a key component of the axoneme required for sperm motility and male fertility

Shuntai Yu, Guoliang Yin, Peng Jin, Weilin Zhang, Yingchao Tian, Xiaotong Xu, Tianyu Shao, Yushan Li, Fei Sun, Yun Zhu, Fengchao Wang

Mouse germline cysts contain a fusome that mediates oocyte development

Madhulika Pathak, Allan C. Spradling

Organ-specific rewiring of mitochondrial integrity through COX7A dictates cellular ploidy control

Archan Chakraborty, Sophia DeLuca, Meera Gangasani, Stephen Rogers, Nenad Bursac, Donald T. Fox

Essential role for Nup43 in Drosophila fertility and spermiogenesis through Mysin VI-dependent actin cone assembly dynamics

Jyotsna Kawadkar, Ashley Suraj Hermon, Rohit Kumar, Ram Kumar Mishra

ROCK2 inhibition has a dual role in reducing ECM remodelling and cell growth, while impairing migration and invasion

Daniel A. Reed, Anna E. Howell, Nadia Kuepper, Alice M. H. Tran, Astrid Magenau, Deborah S. Barkauskas, Max Nobis, Cecilia R. Chambers, Victoria Lee, Lily M. Channon, Jessie Zhu, Shona Ritchie, Janett Stoehr, Kaitlin Wylie, Julia Chen, Denise Attwater, Kate Harvey, Sunny Z. Wu, Kate Saw, Ruth J. Lyons, Anaiis Zaratzian, Michael Tayao, Andrew Da Silva, David Gallego-Ortega, Anthony J. Gill, Thomas R. Cox, Brooke A. Pereira, Kendelle J. Murphy, Jennifer P. Morton, Elgene Lim, Alexander Swarbrick, Sandra O’Toole, Michael S. Samuel, C. Elizabeth Caldon, Alexandra Zanin-Zhorov, Paul Timpson, David Herrmann

Histone methyltransferase DOT1L differentially affects the development of dendritic cell subsets

Rianne G. Bouma, Willem-Jan de Leeuw, Aru Z. Wang, Muddassir Malik, Joeke G.C. Stolwijk, Veronique A.L. Konijn, Anne Mensink, Natalie Proost, Maarten K. Nijen Twilhaar, Tibor van Welsem, Negisa Seyed Toutounchi, Alsya J. Affandi, Jip T. van Dinter, Fred van Leeuwen, Joke M.M. den Haan

Mechanical context defines integrin requirement for maintaining epithelia architecture

Lourdes Rincón-Ortega, Cecilia H. Fernández-Espartero, Isabel M. Palacios, Acaimo González-Reyes, María D. Martín-Bermudo

The I-BAR domain protein baiap2l1a is required for protrusion and lateral elongation of epithelial microridge structures

Yasuko Inaba, Kimika Iwasaki, Aoi Nakamura, Shiro Suetsugu, Yasumasa Bessho

Integrins pattern the Drosophila embryonic neuroepithelium by influencing progenitor morphodynamics, division and position

Lamiya Dohadwala, Anupriya Garg, Maithreyi Narasimha

Role of Klhl14 in senescence and epithelial-to-mesenchymal transition via TGF-β modulation

Rufina Maturi, Abel Soto-Gamez, Anne L Jellema-de Bruin, Matteo Esposito, Schelto Kruijff, Gabriella De Vita, Rob P. Coppes

Uncovering the role of laminin(lama5) in maintenance of epithelial identity and polarity in bilayer zebrafish epidermis during development

Tooba Khan

Gap junction communication regulates luminal-myoepithelial crosstalk and cell differentiation in a bilayered human mammary epithelial cell model

Alec McDermott, Melany Juarez, David Tovar-Parra, Capucine Duval, Shunmoogum (Kessen) Patten, Isabelle Plante

Spatio-temporal control of nuclear mechanotransduction during Epithelial-to-Mesenchymal Transition

Ronan Bouzignac, Amandine Palandri, Amal Zine El Aabidine, Thomas Mangeat, Tatiana Merle, Martine Cazales, Antonio Trullo, Christian Rouviere, Virginia Pimmett, Mounia Lagha, Magali Suzanne

From Bouzignac et al. This image is made available under a CC-BY 4.0 International license.

Rotational migration in human pancreatic ductal organoids depends on actin and myosin activity

Gengqiang Xie, Chaity Modak, Olalekan H Usman, Raphael WF Tan, Nicole Coca, Gabriela De Jesus, Yue Julia Wang, D. Thirumalai, Xin Li, Jerome Irianto

A dynamic repertoire of wound closure strategies precedes whole-body regeneration

Allison P. Kann, Mansi Srivastava

Camsap3-Mediated Microtubules Maintain Transzonal Projections Essential for Germline-Soma Communication during Ovarian Follicle Maturation in Mice

Akihiro Aikawa, Junya Ito, Mika Toya, Masamitsu Sato

Modelling

Bayesian phylodynamics for developmental biology: incorporating age-dependence

Nicola Mulberry, Julia Pilarski, Jana Dinger, Tanja Stadler

Epigenetic–metabolic axis in the temporal scaling of mammalian cortical neurogenesis across species

Quan Wu, Charlotte Manser, Taeko Suetsugu, Ryo Yoshida, Hideya Sakaguchi, Yoichi Nabeshima, Hiroshi Kiyonari, Ruben Perez-Carrasco, Fumio Matsuzaki

Simulation-Based Inference of Cell Migration Dynamics in Complex Spatial Environments

Jonas Arruda, Emad Alamoudi, Robert Mueller, Marc Vaisband, Ronja Molkenbur, Jack Merrin, Eva Kiermaier, Jan Hasenauer

Tools & Resources

A Novel 3D Visualization Method in Mice Identifies the Periportal Lamellar Complex (PLC) as a Key Regulator of Hepatic Ductal and Neuronal Branching Morphogenesis

Tongtong Xu, Fujun Cao, Ruihan Zhou, Qin Chen, Jian Zhong, Yulin Wang, Chaoxin Xiao, Banglei Yin, Chong Chen, Chengjian Zhao

FishFeats: streamlined quantification of multimodal labeling at the single-cell level in 3D tissues

Gaëlle Letort, Tanya Foley, Ilona Mignerey, Laure Bally-Cuif, Nicolas Dray

CUT&TIME captures the history of open chromatin in developing neurons

Kiara C. Eldred, Matthew Wooten, Derek H. Janssens, Joshua Hahn, Shane J Neph, Sierra J. Edgerton, Gracious Wyatt-Draher, Stephanie M. Sherman, Jane E. Ranchalis, Andrew B. Stergachis, Thomas A. Reh, Steven Henikoff

SpinePy enables automated 3D spatiotemporal quantification of multicellular in vitro systems

Ryan G. Savill, Alba Villaronga-Luque, Marc Trani Bustos, Yonit Maroudas-Sacks, Julia Batki, Alexander Meissner, Allyson Q. Ryan, Carl D. Modes, Otger Campàs, Jesse V Veenvliet

Poly(A) probe HCR RNA-FISH specifically marks pyriform nurse cells in the brown anole lizard ovary

Zoe B. Griffin, Bonnie K. Kircher, Richard R. Behringer

Prediction of zoonotic virus-host transmissibility using comparative airway organoids

Namwook Kim, Christine S. Kim, Junhee Park, Hyeon Jun Yoon, Ju Ang Kim, Yong Gun Kim, Joonhyung Kim, Injun Song, Donghyuck Ahn, Jihyeon Myeong, Byungmoo Oh, Jaeyoon You, Eunju Hong, Sukin Jeong, Kyungmoo Yea, Sung Won Kim, Ok Sarah Shin, Seung Joon Kim, Minho Lee, Myungin Baek, Youngtae Jeong

Automated Image-Based Profiling of Pluripotent Stem Cell Colonies

Rui Geng, Benjamin L. Kidder

RNAi Gene knockdown of R-opsin and F-actin in the marine annelid Streblospio benedicti by delivering dsRNA

Jose Maria Aguilar-Camacho, Christina Zakas

Stable Maintenance of Two-Cell-Like Cells from Embryonic Stem Cells Reveals Chromatin and Super Enhancer Regulation of MERVL Elements

Rui Geng, Benjamin L. Kidder

Human DCM-time machine unravels cell state changes during primitive gut tube differentiation

Marieke E. van Leeuwen, Beatrice F. Tan, Evelyne Wassenaar, Esther Sleddens-Linkels, Ruben Boers, Cristina Gontan, Joost Gribnau

Identification of optimal fluorophores for use in the Drosophila embryo

Bernardo Chapa-y-Lazo, Thamarailingam Athilingam, Prabhat Tiwari, Prachi Pathak, Shaobo Zhang, Sophie Theis, Timothy E Saunders

Direct, high-throughput linking of single cell imaging and gene expression

Catherine K Xu, Georg Meisl, Nikita Moshkov, Karolis Goda, Alexey Shkarin, Maximilian F Schlögel, Tuomas PJ Knowles, Linas Mazutis, Jochen Guck

Streamlined Montage Cryo-Electron Tomography for Exploring the Ultrastructure of Cells and Tissues

Ryan Hylton, Micaela Boiero Sanders, Adriana Prajica, Gavin Rice, Stefan Raunser

Recapitulating apicobasal tissue polarity in extracellular matrix incorporated airway organoids

Zhuowei Gong, Dhruv Bhattaram, Laura Porritt, Kian Golestan, Amir Barati Farimani, Amy L. Ryan, Daniel J. Weiss, Xi Ren

Bridging the resolution gap in cryo-CLEM by introducing cryo-SXT: cryo-CLXEM

Johannes Groen, Anastasia Gazi, Sergey Kapishnikov, Anne Brelot, Matthijn Vos, Jost Enninga, Eva Pereiro, Anna Sartori-Rupp

Optimized CRISPR/Cas9 Electroporation and Single Cell Cloning Protocol for Generating Pure Cellular Models in Human Immortalized Myoblasts

Adrien Rihoux, Alexie Gagné, Jean Mezreani, Clémence Gonthier-Cummings, Laura K. Hamilton, Eric Samarut, Martine Tétreault

Deep3DSIM: Super-resolution imaging of thick tissue using 3D structured illumination with adaptive optics

Jingyu Wang, Danail Stoychev, Mick Phillips, David Miguel Susano Pinto, Richard M. Parton, Nick Hall, Josh Titlow, Ana Rita Faria, Matthew Wincott, Dalia Gala, Andreas Gerondopoulos, Niloufer Irani, Ian Dobbie, Lothar Schermelleh, Martin Booth, Ilan Davis

SPACE: spatially resolved multiomic analysis for high-throughput CRISPR screening in 3D models

Mengwei Hu, Yi Cui, Qianhui Huang, Khoi Chu, Sierra McKinzie, Michael Patrick, Sharanya Iyengar, Maerjianghan Abuduli, Marianne Spatz, Nandita Joshi, Brendan Miller, Shams Vellarikkal, Timothy Riordan, Danny Bitton, Jan Lubojacky, Iya Khalil, Federica Piccioni, Michael Rhodes, Alex Tamburino, Shanshan He, Joseph Beechem, Vanessa Peterson

ArchVelo: Archetypal Velocity Modeling for Single-cell Multi-omic Trajectories

Maria Avdeeva, Sarah Walker, Joris van der Veeken, Alexander Rudensky, Yuri Pritykin

Generation of Valvular Interstitial Cells from Human Pluripotent Stem Cells

Amine Mazine, Alexander A. Mikryukov, Ian Fernandes, Clifford Z. Liu, Soheil Jahangiri, Marcy Martin, Eric K. N. Gähwiler, Melanie Generali, Juliana Gomez, Neda Latifi, Yifei Miao, Yu Liu, Michael A Laflamme, Craig A Simmons, Simon P. Hoerstrup, Maximilian Y. Emmert, Bruce D. Gelb, Mingxia Gu, Gordon M. Keller

Automatic Body Morphometric Analysis of Adult Zebrafish Using MicroCT

Mohammed Kanani, Ronald Young Kwon

Alternating Angle Milling Suppresses Streaking Artifacts in FIB-SEM Imaging

Gleb Shtengel, Wei Qiu, Jesse Aaron, Arthur S. Crowe, Alexey A. Polilov, Katerina Karkali, Christopher K.E. Bleck, Harald H. Hess

Smart Microscopy: Current Implementations and a Roadmap for Interoperability

Lucien Hinderling, Hannah S. Heil, Alfredo Rates, Philipp Seidel, Manuel Gunkel, Benedict Diederich, Thomas Guilbert, Rémy Torro, Otmane Bouchareb, Claire Demeautis, Célia Martin, Scott Brooks, Evangelos Sisamakis, Erwan Grandgirard, Jerome Mutterer, Harrison Oatman, Jared Toettcher, Andrii Rogov, Nelda Antonovaite, Karl Johansson, Johannes K. Ahnlinde, Oscar André, Philip Nordenfelt, Pontus Nordenfelt, Claudia Pfander, Jürgen Reymann, Talley Lambert, Marco R. Cosenza, Jan O. Korbel, Rainer Pepperkok, Lukas C. Kapitein, Olivier Pertz, Nils Norlin, Aliaksandr Halavatyi, Rafael Camacho

Botanic Spectrum Analyser: A Deep Learning GUI for Plant Image Segmentation in Hyperspectral and RGB Phenotyping

Jason John Walsh, Levent Görgü, Emilie Jacob, Victoria Poulain, Laurent Gutierrez, Eleni Mangina, Sónia Negrão

Research practice & education

Mirror-image inversion in commonly used compound microscopes

François Lapraz, Céline Boutres, Baptiste Monterroso, Stéphane Noselli

Temperature-dependence of Early Development of Zebrafish and the Consequences for Laboratory Use and Animal Welfare

Angelina Miller, Katja L. Schröder, Karsten E. Braun, Caitlin Steindorf, Richard Ottermanns, Martina Roß-Nickoll, Henner Hollert, Thomas Backhaus

Speaker responses to audience-induced social-evaluative threat: Evidence from scientific presentation tasks in immersive virtual reality

Sue Lim, Ralf Schmälzle, Gary Bente

Reducing the environmental footprint of laboratory research using visual communications: A pilot study in Spain

Raquel Marco-Ferreres, Silvia Ayora, Carmela Cela, Álvaro Sahún-Español, María López-Sanz, Pablo Izquierdo

Natural history museums are missing an opportunity to present research and collections on YouTube

Selina A. Ruzi, Adrian A. Smith, Nicole M. Lee, Nicolás J. Galvez, Timothy A. Dinh

Evaluation of the Utility of a Research Ethics Training Course to Graduate Students

Michael D. Schaller, Peter H. Mathers

10 recommendations for strengthening citizen science for improved societal and ecological outcomes: A co-produced analysis of challenges and opportunities in the 21st century

Jack Nunn, Håkon da Silva Hyldmo, Lauren McKnight, Heather McCulloch, Jennifer Lavers, Julie Old, Laura Smith, Nicola Grobler, Cheryl Tan Kay Yin, Wing Yan Chan, Candice Raeburn, Nittya S. M. Simard, Adam Kingsley Smith, Sam Van Holsbeeck, Eleanor Drinkwater, Kit Prendergast, Emma Burrows, Christopher L. Lawson

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