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An interview with Kathryn Anderson

Posted by , on 15 November 2016

This interview by Aidan Maartens first featured in Development, Volume 143, Issue 22

 

Kathryn Anderson is Professor and Chair of the Developmental Biology Program at the Sloan Kettering Institute in New York. Her lab investigates the genetic networks underlying the patterning and morphogenesis of the early mouse embryo. We caught up with Kathryn at the 2016 Society for Developmental Biology – International Society of Differentiation joint meeting in Boston, where she was awarded the Edwin G. Conklin medal.

 

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You’re here at the SDB-ISD meeting to receive the Edwin G. Conklin medal. What does the award mean to you?

The recognition of your colleagues is a wonderful thing and I guess I’m kind of sentimental about this. It’s nice to think that the people in the field appreciate what we’ve done. The other part that’s particularly nice is that for a long time I was thought of as a fly person who’d gone astray! Doing the mouse project was a big risk and to think that people have appreciated it means a lot to me.

 

When did you first become interested in biology?

My parents must have steered me in this direction. My father was probably a frustrated chemist and I guess he wanted me to do science, not that I was particularly aware of it. I did science fairs at junior high and then I had an absolutely wonderful biology teacher in high school: he made a huge difference. We’d read things like The Double Helix and got an impression of what it was like to do science, not just the theory. And also, I grew up by the beach so a lot of my spare time was spent looking at tide pools, pulling up little animals – I always loved that.

 

In your early career at Berkeley you made seminal contributions to our understanding of early embryonic patterning in Drosophila. Looking back, do you think many of the questions you grappled with then have now been answered?

At the time I moved away from dorsoventral patterning, there were many open questions in the field, but I think no burning ones that I particularly wanted to get to the bottom of. Since I’ve left the field there have been huge steps forward. I’ve particularly followed progress in understanding morphogenesis, for instance Maria Leptin’s and Eric Wieschaus’ work on how the furrow cells actually do what they need to do, which has been really exciting. The Toll pathway has also opened up in exciting new ways. So it’s great to be able to follow the field in depth, because I used to live there!

 

In the 1990s your lab switched from working exclusively with flies to accommodate mice as well and mice are now your lab’s primary model system. What spurred on that change, and was it a challenging transition?

I was always interested in mammalian development and I took a mouse genetics course at Bar Harbor when I was teaching in Berkeley. So I was intrigued by the possibilities of mouse genetics. And then I did this totally wonderful sabbatical with Rosa Beddington at Mill Hill in London. At the time Mill Hill was exclusively vertebrate developmental biology, so to go there from the invertebrate field was very engaging. Rosa was amazing and she made mouse embryos seem totally accessible. I had some time to think on this sabbatical and thought ‘well, these guys really know what they’re doing, I can’t really improve on mouse knockout technology’. So what could I do in mice that would be a little different? This was the time when the MIT mouse genome project was beginning, where they’d made DNA polymorphism-based markers for genetic mapping. I read those papers and thought: you could actually map a mutant with a very small number of animals with that technology. So this opened up the possibility of doing forward genetics in mouse. One graduate student, Andrew Kasarskis, was convinced that he could get a thesis out of it, though many people thought I’d lost my mind! He moved with me when we moved the lab to New York, which really helped.

In terms of the challenges: I wasn’t really put off by them. The long generation time didn’t bother me – I mean a fly screen takes a year and a half! You just do things on a smaller scale. My goal was never to do Drosophilasaturation mutagenesis, that wouldn’t have worked.

 

And you seem to have brought an enthusiasm for genetics into your mouse work…

Genetics is essential. But we’ve never done only genetics – we combined it with biochemistry, cell biology, molecular biology. Genetics doesn’t exist in isolation, but without genetics you don’t know where your reality is. The fun and kind of sad thing about mammalian genetics is that there’s so much we don’t know, so you can do a simple, forward genetic recessive loss-of-function screen and still find new stuff. And this is in the mouse, which is such an important model – it’s a real thrill.

 

And what got you interested in primary cilia?

It was totally driven by the screen we did. It turns out there are a lot of genes in the mammalian genome that are required to make primary cilia. And if you make mutations in these genes you get aberrant Hedgehog signalling, and Hedgehog mutants have these beautiful and striking phenotypes at mid-gestation, the stage we chose to screen at. The phenotypes just leap out at you. We were also fortunate that we were prepared to recognise they were Hedgehog signalling mutants. Jonathan Eggenschwiler, the first postdoc to work on mice in my lab, had worked on one of the very first five mutants that came from the screen, which turned out to be Rab23. Jonathan did a lot of painstaking work to show that this mutant disrupted Hedgehog signalling and in the course of doing that we got to know what Hedgehog pathway mutants looked like morphologically.

Other people had made IFT [intraflagellar transport] mutants that disrupted cilia and hadn’t recognised what they were, but when we saw them in our labs, under our microscopes we said, ‘that’s Hedgehog’! That turned out to be pretty amazing, actually: there’s this whole organelle required for Hedgehog signalling in vertebrates, but not in flies, and there are literally hundreds of non-redundant genes in the mammalian genome where mutations disrupt cilia and thus Hedgehog signalling. It’s a geneticist’s dream, but raises the question of why organise the genome like this: there are so many weak points in Hedgehog signalling – and Hedgehog is so vital.

So at first we had an embarrassment of riches, trying to figure out how each of these genes worked. Other people started working on it too and showed that the Hedgehog pathway proteins are enriched in cilia and that they traffic from one place to another in response to Hedgehog ligands. This became an organelle that’s doing something dynamic and extremely interesting. And then, if you perturb the ciliary structure in different ways, you alter the pathway in different ways. So you can get gain or loss of signalling by disrupting different proteins, all of which are required to make cilia. It became a complex, but also tractable, puzzle.

 

 

Your lab also currently works on the mechanisms of gastrulation in the early mouse embryo.

Gastrulation was really what I came into the mouse system to do. To my great disappointment the Toll pathway does nothing in the early mouse embryo: the plan for my sabbatical was to start getting a foothold in what Toll does in early mammalian development, but my and other people’s studies made it pretty clear early on that the conserved function of the Toll pathway was in immunity, not development.

And so we worked on immunity for a little while, but I’m really a developmental biologist. My rationale for doing mouse genetics was that if the Toll pathway has nothing to do with mammalian development, then maybe there are things about early mammalian development that you can’t figure out by extrapolating from flies. So I wanted to find out the rules that control gastrulation and cell fate specification in the mouse. Mice are obviously very different to flies: everything is dynamic. It’s not like a blastoderm where every cell sort of knows what it’s going to do. Cell fate decisions are being made ‘on the fly’: cells move from one place to another, see another cue, do something different. It seemed like the rules might be quite different.

In the meantime a lot of people knocked out a lot of genes and found a bunch of signalling pathways important for mouse gastrulation, but the mutations we identified through screens were mostly other things: cell biology was really prominent. For instance, we’ve been very interested in how epithelial organisation and cell migration are regulated by those signalling molecules, and how they actually control a cell’s behaviour to get it to the right place to sense the next signal. Unlike the famous fly screens, in mouse screens we actually get a lot of the ‘mechanical’-type factors like cytoskeletal regulators. This is partly due to the lack of a real maternal contribution: you’re looking at the first time a lot of these systems are used. One of the first mutants we identified was a regulator of the Arp2/3 complex, something you’d not expect to find as a regulator of patterning in the fly screens, but which had anterior-posterior duplications in the body plan in the mice. This tells us that cell migration is crucial to make the body plan of the mouse. It was surprising and delightful to get these sorts of core cell biological factors coming from the screens.

 

Your lab is based at the Sloan Kettering Institute. I wonder what working in proximity to cancer biologists is like?

The Sloan Kettering Institute is the basic science branch of the Memorial Sloan Kettering Cancer Center and while there is cancer biology done here, most of it is basic science. When I arrived, I went to the Molecular Biology programme which was this funny mix of nucleic acid biochemists and fly geneticists. When Harold Varmus became president he decided that because of his personal experience, developmental biology was really important for cancer and so there should be a developmental biology unit. I think development is well appreciated in the Institute and we do get exposed to cancer biology. It’s nice to be able to see the connections and learn to speak the language.

 

Two years ago you were awarded FASEB’s Excellence in Science Award, which recognises outstanding achievements by women in biology. What do you think of the current outlook for young female researchers in developmental biology?

Things have improved, though perhaps not as much or as quickly as one would have hoped. Women face the same challenges as they did 20 years ago and there are fewer women in the field than there should be. I think things get better when there are women in leadership positions and that’s one way forward – to break these glass ceilings and make sure that we lobby to have women in charge, or create positive reinforcements for institutions that take these actions. As well as being positive role models, women in leadership positions can practically understand how to increase the prospects for younger women researchers.

 

Do you have any advice for young scientists?

Find what you love – it might be something that you love just for a personal reason – and follow that. You really need a personal love for what you’re doing.

 

What might Development readers be surprised to find out about you?

Maybe it’s not ‘surprising’, but a real passion I have outside the lab is music, whether modern classical composers like David Lang or bands like Radiohead. And New York is a great place for this passion.

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In Development this week (Vol. 143, Issue 22)

Posted by , on 15 November 2016

Here are the highlights from the current issue of Development:

 

A postnatal model for Zika virus infection

Zika virus (ZIKV) infection results in zikaembryonic microcephaly and has been declared a global health emergency by the World Health Organization. Disruption of the neural progenitor cells is considered to be the major cause of microcephaly; however, the fate of other cell types, including differentiated neurons and vascular cells, remains unknown. Since infected mouse embryos die perinatally, it also remains unknown whether ZIKV infection can cause postnatal microcephaly in animal models. Now, on p. 4127, Jian-Fu Chen and colleagues report a postnatal model for ZIKV infection using intracerebral inoculation of embryonic brains with the ZIKV. The infected pups survive after birth and show postnatal microcephaly, which bears relevance for a better understanding of the microcephaly observed in ZIKV-infected newborn humans. In addition to microcephaly, the postnatal mouse model recapitulates several aspects of fetal brain abnormalities associated with ZIKV in humans, including extensive neuronal apoptosis and loss, axonal rarefaction, corpus callosum diminishment, and reactive astrocyte and microglial cell accumulation. Furthermore, the authors show that ZIKV infection leads to increased vessel density and vessel diameter, and causes blood–brain barrier leakage in the developing brain. While further research is required to better characterise the approach, the development of a postnatal model for ZIKV infection is an important step forward in understanding this disease, and the findings reported by the authors offer novel insight into the pathology of ZIKV infection in the postnatal setting.

 

New network for tooth development: Sox2 bites back

Embedded ImageInitiation and subsequent growth of the mammalian tooth depends on distinct populations of epithelial and mesenchymal stem cells located in the labial cervical loop (LaCL) and the neurovascular bundle, respectively. In rodents, Sox2 marks the dental epithelial stem cells (DESCs) and has been shown to be an important regulator of tooth development, but the molecular mechanism by which this occurs has not been determined. In this issue (p. 4115), Brad Amendt and colleagues uncover a Pitx2/Sox2/Lef-1 network that controls the epithelial stem cell niche in the continuously erupting rodent incisor. The authors demonstrate that Sox2 is necessary for the maintenance of the stem cell niche, as inactivation of Sox2 leads to lower incisor arrest, as well as abnormalities in the upper incisor and molar teeth. Conditional overexpression of Lef-1 can partially rescue the Sox2-related defect in incisor growth, possibly owing to increased cell proliferation at embryonic stages and the formation of a new compartment of stem cells in the LaCL. The authors also provide evidence for physical interaction between Pitx2 and Sox2, and show how both factors are core components of the Pitx2/Sox2/Lef-1 network. Together, these findings represent a significant milestone in our understanding of the transcriptional control that defines dental stem cell development and differentiation.

 

 

An interview with Kathryn Anderson

Embedded ImageKathryn Anderson is Professor and Chair of the Developmental Biology Program at the Sloan Kettering Institute in New York. Her lab investigates the genetic networks underlying the patterning and morphogenesis of the early mouse embryo. We caught up with Kathryn at the 2016 Society for Developmental Biology – International Society of Differentiation joint meeting in Boston, where she was awarded the Edwin G. Conklin medal.

 

Transposable elements in development

tereviewThis Review discusses how and when transposable elements are expressed during development and how they modulate genome architecture, gene regulatory networks and protein function during embryogenesis.

 

 

Optimising and improving DamID

Joachim Wittbrodt and colleagues present critical improvements to the DamID protocol improve specificity and sensitivity in determining genome-wide protein-DNA interactions in transient or stable transgenic animal lines.

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Genetically encoded, inducible cell death

Reinhard Köster and colleagues present Tamoxifen-induced Caspase activation in zebrafish. This enables fast, efficient and specific cell ablation via targeted apoptosis.

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Quantitative stem cell biology: the threat and the glory

This meeting report from Steven Pollard highlights the major advances and emerging trends in quantitative stem cell biology as presented at the 5th annual Cambridge Stem Cell Symposium this year.

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Paris – Cambridge – Paris: a Megakaryocyte story

Posted by , on 14 November 2016

The first news came as a shock: so the British Railways are not always perfectly on time? For an Italian, that was a massive cultural shock. The second one was even more surprising: English weather is not that bad; actually, it is better than Parisian weather. But still, I was unable, on the train from Paris to Cambridge, to stop thinking about how exciting it will be to spend some time in a new lab and discover (brace yourself for the jargon) how to properly forward program induced pluripotent stem cells (iPSCs) into megakaryocytes (MKs).

I am Alessandro, a graduate student in Dr. Hana Raslova’s lab and I am currently trying to model and study the pathological mechanism of an inherited platelet disorder associated with a predisposition to develop leukemia. In our lab, we developed several iPSC models for haematological diseases and the transition from the undifferentiated, pluripotent state to the committed, haematopoietic state, in particular when it comes to the specification of MKs progenitors and mature cells, it is not an easy task. That is why I have found the approach developed by Dr. Ghevaert’s team extremely intriguing: instead of recapitulating in vitro the key developmental events of the primitive haematopoiesis, they took a more direct approach and imposed a combination of three transcription factors of great importance for MKs on the pluripotent stem cells. This transcriptional program, called forward programming, force the cells directly into the megakaryocytic fate, generating a highly proliferative cell that retains the main features of mature megakaryocytes, included the production of platelets. Indeed, such a tool would give a major boost to my project of disease modeling, mostly allowing me entire batteries of biochemical assays. After some e-mailing during last summer, Dr. Ghevaert kindly allowed me to visit the lab and try to forward program some of our cell lines.

Guided by the amazing Dr. Thomas Moreau, I was able to achieve this task and see myself the efficient conversion of my iPSCs into megakaryocytes, although some of them did not particularly appreciate the short stint in England and decided to proliferate less efficiently than the usual! Nonetheless, the time in Cambridge was incredibly fruitful: the folks there really helped me to blend in the lab and we had interesting conversations about our work and the different approaches; we also shared some enjoyable time off, listening to the Dr. Ghevaert’s skilled execution of some piano classics! And last but not least, Cambridge is such a lovely town, full of history and beauty, a pleasant alternative to the urban complexity of Paris.

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The river Cam

 

I am really grateful to The Company of Biologists and the journal Disease Models and Mechanisms for their crucial support during this short stay. I hope that more young scientists will continue to benefit from your generous support. Many thanks to the entire Ghevaert’s team for hosting and a big merci to Thomas Moreau for his patience and all the scientific discussions we had.

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POSITION FOR POSTDOCTORAL SCIENTIST IN TUMOR IMMUNOLOGY

Posted by , on 14 November 2016

Closing Date: 15 March 2021

POSTDOCTORAL POSITION

 

Bellvitge Institute for Biomedical Research (IDIBELL) offers a postdoctoral contract to join the Transformation and Metastasis group led by Dr. Eva González-Suárez within the Cancer Epigenetics and Biology Program (PEBC) http://www.idibell.cat/modul/area-6-programa-depigenetica-i-biologia-del-cancer/ca &  http://pebc.cat/

The laboratory of Dr Gonzalez Suarez is funded by the Susan G Komen Foundation and a European Research Council ERC-Consolidator grant. The candidate will join a project focused on understanding tumor-immune crosstalk in epithelial tumors.

 

The primary goal of Dr. Eva González-Suárez´s laboratory is to understand the signaling pathways implicated in epithelial stem cell fate, their alterations during cancer and metastasis, and the interactions between tumor cells and microenvironment. We have a multidisciplinary approach using mouse models, cell cultures, clinical samples and molecular and cell biology techniques to translate basic research into clinically relevant results.

 

REQUIREMENTS

 

We are looking for motivated postdoctoral scientists holding a PhD in a relevant discipline with interest in cancer biology. Candidates must have:

– An outstanding publication record in peer review journals

– Experience working with mouse models of cancer and patient derived xenografts.

– Strong technical skills in tumor immunology, molecular biology and lineage tracing.

 

WE OFFER

 

  • The opportunity to contribute to cutting-edge research projects and work closely with an international team of scientists and work in one of the leading labs in Europe.
  • A 3-year full time contract, immediate start. Renewal based on performance.

 

APPLICATION

 

  • Applications must include a CV with a cover letter and contacts for 2 references

Please apply by email to: egsuarez@idibell.cat. Please, clearly state in the subject of your email “Postdoc Position” and a link to your most outstanding publication

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A Bioimage Analysis Community Meeting, NEUBIAS2020

Posted by , on 14 November 2016

 

Learn and Communicate Bioimage Analysis

NEUBIAS2020 conference is a new annual meeting of the BioImage Analysis community. We are very glad to invite you to the first conference in Lisbon (Portugal) on 12-17th of February 2017, hosted and co-organized by the Gulbenkian Institute of Science.

The conference aims to promote knowledge- and technological- transfer between all the players of the BioImage Analysis Community: Life scientists, Image Analysis and Software Developers, Microscopists, BioImaging Facility staff, and most importantly: Biomage Analysts, a new profession in Life Science that NEUBIAS aims to support and promote.

In brief, the event articulates in four parts:

All are now open to registration.

The symposium

The Symposium aims to offer a broad view over the latest developments and updates in Bioimage analysis and can be attended independent of registration to training schools. It includes

  • A Showcase giving exposure to open source software packages and tools updates
  • Company’s products
  • Community round tables
  • Career path debates
  • Community progress report

Bioimage Analysis will be covered as a broad field of Research, Technology-development and Service-for-Data-Producers (i.e. researchers in Life Science) in the context of many types of BioImage data: Optical Microscopy, Electron Microscopy, Medical Imaging, among others.

 

More About NEUBIAS, Mobility Grants, Careers, Action

The Network

NEUBIAS is a network Action funded by COST (www.cost.eu), aiming to maximize the impact of advances in imaging technology on the Life Sciences, and to boost the productivity of bioimaging-based research projects in Europe. The Action intends to provide a stronger identity to Bioimage Analysts by organising a new type of meeting fostering interactions between all stakeholders (i.e. NEUBIAS 2020).

Please visit our webpage for more information.

www.neubias.org

Mobility Grants

NEUBIAS also provides mobility funds for scientists willing to expand their knowledge in Bioimage Analysis and/or to develop Image Analysis capabilities for their research project.
Check the next Call for Short Term Scientific Missions, closing on November 15th, 2016.

http://eubias.org/NEUBIAS/mobility-grants/

Career Actions: Our Request

NEUBIAS also needs the input from the whole community to devise best-practice guidelines for the career path of BioImage Analysis, a new profession still not fully recognized in the field. If your work activity embraces Bioimage Analysis to support Life Science (as a service, collaboration etc…), please take 5 minutes to fill our new “Career Consultation”:

http://eubias.org/NEUBIAS/careers/


We are looking forward to see you in February!

On behalf of all NEUBIAS members

Gaby Martins (Event Host, co-organizer)
Sebastian Munck and Arne Seitz (Event Co-organizers)
Jean-Yves Tinevez (Training School co-Organizer)
Fabrice Cordelières and Paulo Aguiar (Training School Organizers)
Perrine Paul-Gilloteaux, Chong Zhang, Sébastien Tosi and Graeme Ball (Taggathon Organizers)
Julia Fernandez Rodriguez (STSMs coordinator)
Kota Miura (Vice Chair, Training School co organizer)
Julien Colombelli (Chair)

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Forgotten classics: Rosa Beddington’s chimeras

Posted by , on 11 November 2016

R. S. P. Beddington (1981). An autoradiographic analysis of the potency of embryonic ectoderm in the 8th day postimplantation mouse embryo. Journal of Experimental Embryology and Morphology. 64: 87-10. Open Access
R. S. P. Beddington (1982). An autoradiographic analysis of tissue potency in different regions of the embryonic ectoderm during gastrulation in the mouse. Journal of Experimental Embryology and Morphology. 69: 265-285. Open Access

Recommended by Patrick Tam, University of Sydney


 

The original chimera was a beast made out of different beasts, with “the head of a lion and the tail of a serpent, while her body was that of a goat, and she breathed forth flames of fire”. Today’s biomedical definition is not too far from Homer’s, a chimera being an organism made up of cells from more than one zygote. As an experimental technique, chimeras have been used for decades to define the developmental potential of cells and the influence of the environment cells find themselves in (does a cell stick to its original fate if transplanted to a different location? Does the environment override an initial choice?). Even today, one stringent test for pluripotency is the ability of transplanted cells to give rise to all cell types in the chimeric organism.

The first mouse chimeras (1, 2) were made by aggregating two pre-implantation (cleavage stage) embryos together: the resultant embryos, twice the normal size, gave rise to normal sized chimeric pups. Subsequent techniques involved injecting exogenous cells into blastocysts. But what about the decisions that happen in later stages? Post-implantation mouse chimeras were pioneered by Rosa Beddington, and her two single author papers describing the work, published in 1981 and 1982 in the Journal of Embryology and Experimental Morphology (the forerunner of Development), are the subject of this Forgotten Classics highlight.

 

embryo-pic
From Figure 3 in the 1981 paper. An 8th day mouse embryo.

 

The two papers should be read together, the second being a continuation and expansion of the first. The question that drove the project concerned the patterning of the epiblast (which was then referred to as the embryonic ectoderm), the tissue that gives rise to the embryo proper.  The problem was articulated by Beddington as follows:

 

“During gastrulation the single epithelial sheet of embryonic ectoderm is converted into a highly complicated form, made up of a variety of tissue types and embodying the basic design of the foetus. This means that the key to foetal organization must lie in the orderly allocation of tissue primordia within the embryonic ectoderm”

 

The problem was the inaccessibility of the mouse embryo for experimental manipulation. In Beddington’s time, while rats could be cultured ex utero until the end of gastrulation, mouse culturing techniques did not achieve comparable successes. Her papers describe a technique by which embryos are dissected from the uterus at day 8, at the late-primitive-streak stage, and then cultured for 36 hours in rat serum. These 36 hours are “a time of intensive cell division and differentiation and also marked by substantial morphogenetic activity”. The culture produced early-somite-stage embryos that look normal when compared to in utero counterparts, with some minor differences (they were more translucent, and had expanded yolk sacs). The work was a technical feat: dissecting early mouse embryos is not easy, yet Beddington was blessed with legendary dissecting skills.

 

embryo
Figure 1 from the 1982 paper. Beddington’s drawing of a sagittal section through an 8th day embryo, showing cell types and transplantation sites

 

This technique allowed the assessment of epiblast cell lineage in the intact embryo. As encountered in the last Forgotten Classic, cell lineage analysis requires a marker, and Beddington chose 3H-thymidine (3H-T), a radiolabelled nucleoside you can visualise with autoradiography. In many ways 3H-T is not the ideal marker: unlike genetic markers it dilutes with cell divisions; subsequent work indicated it can inhibit DNA synthesis and be cytotoxic (although this does not seem to have been a problem with Beddington’s work); and, perhaps most annoyingly, once you have your stained and sectioned embryos, you have to cover them with autoradiographic stripping film for three weeks before processing and analysing the film. Three weeks! And even then, after this intricate and demanding procedure, defective processing meant Beddington had  to discard whole batches of slides.

The method was to bathe day 8 embryos in 3H-T, remove cells from different regions of the epiblast, inject them into unstained, synchronous hosts, and see where the labelled cells ended up after 36 hours in culture. An elegant aspect of the work is the controls: controls that hadn’t been labelled; controls that had been bathed in 3H-T and cultured without dissection; controls that had been fixed before culturing. All of these experiments, diagrammed with characteristic artistry in the figure, were also carried out with reference to in utero development.

 

beddingotn
Figure 1 from the 1981 paper, showing the general strategy of the experiments.

 

With the method established – labelled controls looked pretty much the same as unlabelled controls, and the labelled cells could colonise host tissues and did not form structures you would not expect to see – the stage was set to address her main questions. Was cell fate spatially patterned in the epiblast? In other words, could you draw a fate map? And how plastic was this fate?

Beddington performed two types of injection. Orthotopic injections involved like-for-like injections, with labelled epiblast from a particular donor region injected into the same region in the host. These injections showed that different regions of the epiblast gave rise to different parts of the post-gastrulation embryo: for instance, distal epiblast could contribute to somites and notochord, but anterior epiblast could not. As Beddington acknowledged, this may not have been particularly surprising given results in the chick, but it was important to demonstrate that there was a consistent regionalised pattern of tissue allocation during gastrulation. You could begin to map the post-gastrulation embryo back to the epiblast.

 

technique
Figure 2 from the 1981 paper, showing the transplantation technique. The embryo was held in place with a holding pipette, and donor cells inserted into the tissue with an injection pipette.

 

What orthotopic transplantation cannot reveal is whether this regionalisation reflects an inherent cell fate, or the consequence of epiblast cells perceiving extrinsic cues. Heterotopic transplantation, putting donor cells in a location in the host that is different from where they came from, allowed Beddington to get at this. She found no evidence for rigid cell fate in the epiblast: when transplanted to a different location, cells readily contributed structures other than those they form normally (although there were some ‘propensities’ of certain cells to contribute to one structure or another, suggesting some degree of cell fate restriction). Thus, cell fate at the epiblast stage is ‘plastic’, and could be readily influenced by the environment the cells find themselves in. So the story is a mix: you can draw a fate map on the epiblast, but the cells are happy, if we labour the metaphor a bit, to learn a new language when transplanted into another country.

These papers represent a landmark of mouse embryology. In the following decades, many of the molecular players in epiblast patterning have been identified, as well as the mechanisms that maintain epiblast cell potency, supporting and expanding Beddington’s work. The recent BSDB meeting celebrating the present and future of chimeric research shows that chimeras still have as much to tell us about development as they taught Rosa Beddington in the early 1980s.

 


Thoughts from the field

Patrick Tam, University of Sydney

“The findings of these works have revealed the regionalisation of cell fates in the germ layers of the gastrulating mouse embryo, pointing to the establishment of a basic body plan.  These studies also outlined an experimental paradigm for the analysis of cell fate and potency in a mammalian embryo using innovative techniques of micromanipulation, lineage tracking and whole mouse embryo culture.     

Recently, there is heightened interest in the application of these techniques to generate post-implantation chimeras for assessing the differentiation potential of stem cells, such as mouse epiblast stem cells and human pluripotent stem cells1 . It is therefore timely and newsworthy to highlight Rosa’s papers.”

1:  Tam PPL (2016) Human stem cells can differentiate in post-implantation mouse embryos. Cell Stem Cell 18: 3-4.  PMID 26748747   DOI:10.1016/j.stem.2015.12.010

 

Virginia Papaioannou, Columbia University Medical Center

It is hard to remember a time before the fate map of the mammalian embryo had experimental backing, but in the late 70s, as mammalian embryo culture and manipulation techniques were just beginning to make great strides, it was the chick fate map that guided us and provided a template for investigation.  These two papers by Rosa Beddington were remarkable in adapting newly devised rat embryo culture methods to allow investigation of mouse postimplantation embryos ex utero and, for the first time, developing methods for making experimental postimplantation mouse chimeras.  Rosa used these techniques to approach two related aspects of embryonic cells: fate and potential, fate being the normal differentiation outcome of a cell in undisturbed development and potential being what that cell is capable of doing in altered circumstances, such as being placed heterotopically in a different position in the embryo. 

These two papers comprise the bulk of Rosa’s thesis work for her D.Phil. from Oxford University in 1981.  I was privileged to serve as her supervisor for this work and rereading the papers brought back the sheer gutsiness of this brilliant young student as she pioneered a new methodology for mouse embryology.  It also sent me searching for my copy of her dissertation, typewritten, with original photos taped onto the pages, where I marvelled anew at the camera lucida drawings of serial sections with labelled cells marked in pen, and hand drawn embryos with color-coded fate maps in coloured pencil. 

In the thesis, the work was divided into a chapter on cell fate (orthotopic tissue transplants in synchronous embryos) and a separate chapter on cell potency (heterotopic transplants in synchronous embryos).  In the subsequent publications this fate vs. potential distinction is not highlighted and both papers refer to “potency” in the title. Although I don’t remember why this was done, I imagine it was because of Rosa’s exactitude in the definition of the terms, as even synchronous orthotopic tissue transplantation is a disruption and might be subtly altering ‘normal’ cell fate.  As we understand more about altering cell states in the age of induced pluripotent stem cells, this assiduous attention to terminology and methodological detail is more relevant than ever.  Rosa’s papers, nonetheless, ushered in an era of rapid advances in understanding cell fate and potential in the postimplantation mammalian embryo.”

 


Aidan Maartens

This post is part of a series on forgotten classics of developmental biology. You can read the introduction to the series here and read other posts in this series here. We also welcome suggestions for future Forgotten Classics.

 

 

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This month on the Node

Posted by , on 11 November 2016

A roundup of the Node’s highlights from October 2016. 

 

preprints

 

October’s most discussed post came from Development’s Executive Editor Katherine Brown, who reported from a workshop on preprints in Cambridge and gave a journal’s perspective on the promises and challenges of preprinting. The comments section is worth reading, as is this recent post from the organiser of the workshop, Alfonso Martinez-Arias.

 

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We also continued our regular round up of preprints in developmental biology: September featured cell mechanics, cell divisions, and mesoderm development.

 

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We  heard from the DMDD about their latest screen into the genetics of neonatal death in mice, and from the IRB about the 18th Barcelona Biomedical Conference focussing on the insights developmental biology can give into pathology. Development’s sister journal Disease Models & Mechanisms announced a Special Collection all about rats.

 

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I reported from Development’s meeting on human development and stem cells (and included jittering scientists and some optical heritage), and the BSDB reported from their Autumn Meeting on the use of chimeras in developmental biology.

 

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Finally, we heard from Matthew Towers and Joseph Pickering, authors of a recent Development paper on digit patterning in the chick.

 

 

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Physical Biology of Stem Cells MRC 4-Year PhD Programme in Stem Cell Biology & Medicine

Posted by , on 10 November 2016

Closing Date: 15 March 2021

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Is this you?:

  • Physical Sciences, Mathematical Sciences or Computational Sciences background?
  • Interested in applying your training to aspects of Stem Cell Biology?
  • Passion for scientific research & hold (or expect to) a relevant 1st degree at the highest level?

 

If so, the Cambridge Stem Cell Institute would like to hear from you.

 

To find out more and apply, please visit:
http://www.stemcells.cam.ac.uk/study/physical-biology

Application Deadline: 6 February 2017 

wellcome-logo-black        mrc-logo       university-of-cambridge-logo

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From our sister journals – October 2016

Posted by , on 10 November 2016

Here we highlight some developmental biology related content from other journals published by The Company of Biologists.


 

Journal typography

roque

Helio Roque and colleagues describe that flies lacking MKS, a component of the transition zone in cilia, show abnormalities during development, but not in the adult.

 

liu

Hua Liu and  Ken-Ichi Nonomura describe large scale chromatin remodelling in meiosis I of rice mediated by the Argonaute protein MEL1

 

devos

In their Commentary, Damien Devos and colleagues explore changing concepts in the emergence of eukaryotic cells, and in his Editorial, Editor-in-Chief Michael Way announces a forthcoming special issue on plants

 

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Gabrielle Kardon and colleagues show that TBX3 is responsible for specifying a subset of forelimb muscles, and their attachment to tendons.

 

spot

Nicholas Pilon and colleagues describe how a mouse line found in a screen for genes involved in neural crest development provides a model for Waardenburg syndrome type 4.

 

bingle

Colin Bingle and colleagues develop an in vitro model of the murine middle ear epithelium, recapitulating cell populations and protein production.

 

cagan

In his Editorial, Senior Editor Ross Cagan gives some tips for those wanting to conduct drug screening in model systems

 

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rooij

Johan de Rooij and colleagues disrupted αE-catenin function in developing zebrafish, and found that specifically disrupting αE-catenin mechnotransduction leads to defective convergence and extension.

 

volk

Elly Ordan and Talila Volk describe how Amontillado, the Drosophila homologue of pheremone convertase 2, cleaves Slit to promote muscle patterning.

 

stress

Ernesto Maldonado and colleagues show that zebrafish mutants lacking stress granules have developmental abnormalities and respond poorly to stress.

 

Journal typography

Manfred Schartl and colleagues explore how the fish genome adapts to abrupt ploidy change by allele silencing.

 

Karl Gotthard and colleagues explore how butterflies regulate energy and lipid metabolism during diapause.

 

 

 

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Intern for Disease Models & Mechanisms

Posted by , on 8 November 2016

Closing Date: 15 March 2021

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DMM is looking for an enthusiastic intern who wishes to gain experience in science publishing, including writing press releases, contributing to our social media activities, and supporting our Reviews Editor with commissioned articles. The internship is envisaged to last for 9 months at a salary of £20,000 per annum pro rata.

Our interns have a great track record of continuing on into important publishing roles.

Joining an experienced and successful team, the internship offers an ideal opportunity to gain in-depth experience on a growing Open Access journal in the exciting and fast-moving field of translational research. DMM publishes primary research articles and a well-regarded front section, including commissioned reviews and poster articles, thought-provoking editorials and interviews with leaders in the field. We also have an active social media presence and will be growing our press release programme. The intern will work alongside an established publishing team in our Cambridge offices.

Because the journal serves both basic biomedical researchers and clinicians, applicants will have a PhD or MD, ideally with some relevant research experience, and a broad knowledge of model organisms and disease issues.

Is the role for you? You would be expected to…

Support our Reviews Editor:
• Identify and commission topical front-section content from top-ranking scientists, see articles through peer review and work closely with authors to finalise articles for publication.
• Travel to international scientific conferences and research institutes, representing the journal, keeping abreast of the latest research and making contacts in the DMM community.

Develop your own areas of activity:
• Spot newsworthy articles, write informative press releases and handle any media enquiries.
• Interview high-profile scientists in the biomedical arena.
• Contribute to our social media output.
• Be creative – contribute other ideas for the journal’s development and promotion.

Essential requirements for the job are enthusiasm, commitment, judgement and integrity. Candidates should have excellent interpersonal skills and confidence, excellent oral and written communication skills, and a broad interest in research and the research community. They should also be willing to travel. Previous editorial experience is not required, but we would expect candidates to be able to demonstrate an interest in scientific communication.

For details on how to apply, go to: http://www.biologists.com/wp-content/uploads/2015/05/DMM-Intern.pdf

DEADLINE FOR APPLICATIONS: 30TH NOVEMBER 2016

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