DORA

San Francisco Declaration on Research Assessment

DSC_0283_cleaned_small

From Sequence to Function

Kasuga Grand Shrine, Nara

Young British Researchers Visit Japan

Slide1

Journal club on the Node

In Development this week (Vol. 138, Issue 6)

Posted by on February 22nd, 2011

Here are the research highlights from the current issue of Development:

Arteriovenous-specific regulation of angiogenesis


Endothelial cells (ECs) assume arterial- or venous-specific molecular characteristics at early stages of development. These lineage-specific molecular programmes subsequently instruct the development of the distinct vascular architectures of arteries and veins. Now, on p. 1173, Jau-Nian Chen and co-workers investigate the role that these early molecular programmes play in angiogenesis. Using the zebrafish caudal vein plexus as a model for venous-specific angiogenesis, they identify a new compound, aplexone, as an inhibitor of venous, but not arterial, angiogenesis. They show that aplexone targets the HMG-CoA reductase (HMGCR) pathway and that injection of mevalonate, a metabolic product of HMGCR, into zebrafish embryos reverses the effect of aplexone on venous angiogenesis. They also show that the inhibitory effect of aplexone on venous angiogenesis in zebrafish and human ECs is mediated by HMGCR-regulated membrane targeting of the small GTPase RhoA through protein prenylation. These and other findings indicate that angiogenesis is differentially regulated by the HMGCR pathway in an arteriovenous-specific manner in both zebrafish and human ECs.



miRNA hits Barx1 in the stomach


The spatiotemporal control of gene expression is crucially important during development, and microRNAs (miRNAs; short RNA molecules that silence complementary mRNA sequences) are thought to fine-tune the expression of developmentally important genes. Here, Ramesh Shivdasani and colleagues report that specific miRNAs influence mouse stomach organogenesis by regulating the expression of the mesenchymal transcription factor Barx1 (see p. 1081). Barx1 controls stomach morphogenesis and helps to specify the stomach-specific epithelium. However, Barx1 levels in the stomach decline sharply after epithelial specification. The researchers show that depletion of the miRNA-processing enzyme Dicer in cultured stomach mesenchymal cells increases Barx1 levels and that conditional Dicer gene deletion in mice disrupts stomach development. They identify miR-7a and miR-203 as regulators of Barx1 expression and show that these miRNAs repress Barx1 expression in the developing stomach by binding to the Barx1 3′ untranslated region. Barx1 downregulation by miRNAs in the mouse embryonic stomach might thus be an example of a widely used mechanism for modulating gene expression during development.



EGF signals muscle in to maintain intestinal stem cells


In high-turnover tissues, the precise control of stem cell proliferation is essential for tissue homeostasis. In Drosophila, the integrity of the midgut epithelium is maintained by intestinal stem cells (ISCs) but what regulates the proliferation of these cells? Benoît Biteau and Heinrich Jasper now report that EGF receptor (EGFR) signalling maintains the proliferative capacity of ISCs (see p. 1045). Using clonal analysis, RNAi knockdown and other experimental approaches, the researchers show that the EGF ligand Vein is expressed in the muscle surrounding the intestinal epithelium and that Vein provides a constitutive signal that activates ERK (extracellular signal-regulated kinase) in ISCs. Interestingly, the transcription factor FOS integrates this EGFR/ERK signal with signals mediated by the JNK (Jun N-terminal kinase) pathway in response to stress. The researchers suggest that the visceral muscle acts as a functional niche for ISCs and propose that FOS, by integrating the niche-derived permissive signal with stress-induced instructive signals, adjusts ISC proliferation to environmental conditions.



Niche-free progression of adult neural stem cells


Many tissues contain adult stem cells that could provide sources of cells for cell-based therapies. For example, adult neural stem cells (NSCs), which are found in brain regions such as the subependymal zone (SEZ), could be used to treat nervous system disorders. Little is known, however, about the intrinsic specification of adult NSCs or how dependent this specification is on the local niche. To understand the biology of NSCs better, Benedikt Berninger and co-workers have been using continuous live imaging to follow the cell divisions and lineage progression of cells isolated from the adult mouse SEZ (see p. 1057). They now report that SEZ cells cultured at low density without growth factors are primarily neurogenic, and that adult NSCs progress through stereotypic lineage trees consisting of asymmetric stem cell divisions, symmetric transit-amplifying divisions and final symmetric neurogenic divisions. The researchers conclude from these results that lineage progression from stem cell to neuron is cell-intrinsic and is independent of the local niche to a surprising degree.



Going with the flow: Pkd1l1 and Pkd2 set L-R axis


The internal organs of all vertebrates show distinct left-right (L-R) asymmetry. The earliest known event in the establishment of this asymmetry is a leftwards extracellular fluid flow at the embryonic node. This ‘nodal flow’, which is generated by the rotational movement of node cilia, activates asymmetric gene expression. But how is nodal flow detected? The two-cilia hypothesis proposes that, whereas motile cilia generate the flow, immobile node cilia detect nodal flow and respond by generating a left-sided Ca2+ signal. This signal generation is thought to be mediated by a complex consisting of the calcium channel polycystic kidney disease 2 (Pkd2) and an unknown sensor protein. In this issue, two papers further evaluate this hypothesis.


On p. 1131, Dominic Norris and colleagues identify the Pkd1-related locus Pkd1l1 as the missing Pkd2 partner and sensor protein in L-R patterning in mouse. Point mutants in either Pkd1l1 or Pkd2 fail to activate asymmetric gene expression at the node, they report, and develop similar L-R patterning defects. Cilia and node morphology and cilia motility are normal in both types of mutant, however, which suggests that Pkd1l1 and Pkd2 act downstream of nodal flow. Moreover, Pkd1l1 and Pkd2 localise to cilia and interact physically. Thus, the researchers propose, Pkd1l1 and Pkd2 form a cilia-specific stress-responsive channel in the node, a conclusion consistent with the two-cilia hypothesis.


On p. 1121, Hiroyuki Takeda and colleagues report that the medaka mutant abecobe is defective for L-R asymmetric gene expression but not for nodal flow, and identify the abecobe gene as Pkd1l1. They show that Pkd1l1 expression is confined to Kuppfer’s vesicle (KV; a medaka organ equivalent to the mouse node) and that, as in the mouse, Pkd1l1 interacts with and colocalises with Pkd2 in KV cilia. However, importantly, the researchers report that all KV cilia contain Pkd1l1 and Pkd2 and that all of the KV cilia are motile. These results necessitate reconsideration of the two-cilia model for L-R patterning and the researchers propose a new model in which cilia both generate nodal flow and interpret it through a nodal flow sensor that consists of Pkd1l1-Pkd2 complexes.



Plus…


Definitive hematopoietic stem cells (HSCs) give rise to all of the mature blood cell lineages in adults, and, as reviewed by Alexander Medvinsky and colleagues, recent advances have shed light on the embryonic origin of HSCs. See the Review Article on p. 1017



GD Star Rating
loading…
Share

Tags , , , , , , , , , , , ,
Category Research | No Comments »

In Development this week (Vol 137, Issue 19)

Posted by on September 7th, 2010

Here are the research highlights from the current issue of Development:

Nr5a receptors reset EpiSC pluripotency


Rodent embryonic stem (ES) cells that are derived from blastocysts self-renew without mitogenic growth factors and robustly colonize chimaeras, whereas egg cylinder-derived stem cells (EpiSCs) require fibroblast growth factor and contribute poorly to chimaeras. Nevertheless, expression of a single reprogramming gene, such as Klf4 or Nanog, can return EpiSCs to a molecular and developmental pluripotent ‘ground state’. Now, on p. 3185, Ge Guo and Austin Smith use a genome-wide genetic screen to identify other molecules that can reprogramme EpiSCs. By using piggyBac transposition to randomly activate endogenous gene expression in mouse EpiSCs and by selecting for undifferentiated colonies in the absence of growth factors, the researchers unexpectedly identify the Nr5a nuclear receptors as potent inducers of ground state pluripotency. Intriguingly, they also show that, unlike previously identified reprogramming factors, Nr5a receptors do not play a role in ES cell renewal. Together, these results highlight the usefulness of EpiSC conversion (in defined culture) as an experimental system for studying molecular reprogramming.



EGFR-Notch signalling makes (proneural) waves


During neurogenesis in the Drosophila optic lobe, a wave of differentiation that converts neuroepithelial cells into neuroblasts sweeps across the neuroepithelial sheet in a medial to lateral direction. This differentiation wave is preceded by the ‘proneural wave’: the transient expression of the proneural gene lethal of scute [l(1)sc]. Now, Tetsuya Tabata and colleagues report that EGFR and Notch signalling play pivotal and coordinated roles in proneural wave progression in the Drosophila optic lobe (see p. 3193). They show that EGFR signalling is activated in neuroepithelial cells and induces l(1)sc expression. Transient, spatially restricted expression of Rhomboid regulates EGFR, they report, and Rhomboid expression is regulated by the EGFR signal, a feedback loop that moves the proneural wave laterally. The researchers also report that Notch signalling, which prolongs the proneural state, is regulated both by itself and by EGFR signalling. Based on these results, the researchers propose that coordinated sequential EGFR and Notch signalling regulates proneural wave progression, which, in turn, induces neuroblast formation in a precisely ordered manner.



Hand2 on heart: promoting cardiac fusion


The embryonic heart tube forms from bilateral groups of cardiomyocytes that move towards the embryonic midline where they merge. The transcription factor Hand2 is essential for this ‘cardiac fusion’ but its downstream effectors are unknown. By studying zebrafish heart development, Deborah Yelon and colleagues now identify Fibronectin as a component of the Hand2 pathway that mediates cardiac morphogenesis (see p. 3215). By performing transplantation experiments between wild-type and hand2 mutant embryos, the researchers show that hand2 regulates cardiac fusion by altering the environment through which the cardiomyocytes migrate. Next, they show that fibronectin 1 (fn1) expression is increased in hand2 mutant embryos. Finally, they report that reduction of fn1 function rescues cardiac fusion in hand2 mutant embryos but not the apicobasal polarity defect that is also seen in these embryos. Thus, the Hand2 pathway regulates cardiac morphogenesis by establishing an appropriate environment for cardiac fusion by limiting Fibronectin function but it establishes the apicobasal polarity that is needed for heart tube extension through another, unidentified, effector.



Wise up to Wnt’s role in tooth development


The number, size and shape of mammalian teeth vary widely – just compare a person’s smile with a dog’s ‘smile’. But what controls the patterning of dentition? Mutations in Wise (Sostdc1), which encodes an inhibitor of Lrp5- and Lrp6-dependent Wnt signalling, cause patterning defects in tooth development in mice. Now, by investigating the pathways modulated by Wise, Robb Krumlauf and co-workers show that crosstalk between Wnt and other signalling pathways controls mouse tooth development (see p. 3221). The researchers use genetic experiments to reveal that Wise suppresses the survival of vestigial tooth buds in the normally toothless region between the incisors and molars by inhibiting Lrp5- and Lrp6-dependent Wnt signalling. They also identify the Fgf and Shh signalling pathways as major downstream targets of Wise-regulated Wnt signalling, and show that Shh acts as a negative-feedback regulator of Wnt signalling. Thus, the researchers suggest, variations in the expression of signalling modulators such as Wise could underlie the evolutionary diversity in mammalian dentition.



Del1-ving into forebrain development


During early embryogenesis, morphogen gradients specify the neural plate along the anterior-posterior axis. Canonical Wnt signalling causes the posteriorization of neural tissues. Consequently, Wnt signal attenuation in the embryo’s anterior region is required for the determination of the head region; but how is this achieved? On p. 3293, Hidehiko Inomata, Yoshiki Sasai and co-workers reveal that modulation of canonical Wnt signalling by the extracellular matrix protein Del1 (Developmental endothelial locus-1) is essential for forebrain development in Xenopus embryos. Del1 overexpression expands the forebrain domain, the researchers report, whereas Del1 functional inhibition represses forebrain development. They show that Del1 function in neural plate patterning is mediated mainly by inhibition of canonical Wnt signalling downstream of β-catenin. Notably, however, Del1 inhibition of canonical Wnt signalling involves the Ror2 (receptor tyrosine kinase-like orphan receptor 2) pathway, which is implicated in non-canonical Wnt signalling. These data suggest that Del1 promotes forebrain development by creating a local environment that attenuates the cellular response to Wnt signals via a unique pathway.



Extracellular signal PARtners asymmetric division


Asymmetric cell divisions generate cell diversity during development, and the orientation of the axis of these divisions determines the future position of differentiated cells. But is the asymmetrical localization of the polarity (PAR) proteins that control asymmetric cell division regulated by extracellular or intracellular signals? On p. 3337, Yukinobu Arata and colleagues answer this controversial question. In C. elegans embryos, the P0 zygote and the P1, P2 and P3 germline cells undergo a series of asymmetric divisions. By examining the development of these germline cells in vitro, the researchers show that, although PAR-2 is distributed asymmetrically in P2 and P3 cells in the absence of extracellular signals, the orientation of PAR-2 localization in these cells depends on their contact with endodermal precursor cells. Other experiments indicate that the endodermal precursor cells control the orientation of PAR-2 localization by extracellular signalling via the MES1/SRC1 pathway. The researchers propose, therefore, that Src is an evolutionarily conserved molecular link that coordinates extrinsic cues with PAR protein localization during asymmetric cell divisions.



Plus…

KNOX genes: versatile regulators of plant development and diversity


Plant KNOX homeodomain transcription factors maintain pluripotent stem cells in the shoot apical meristem, and recent studies have uncovered novel roles for the KNOX proteins in sculpting plant form and its diversity, which Angela Hay and Miltos Tsiantis review. See the Review on p 3153



GD Star Rating
loading…
Share

Tags , , , , , , , , , , , , , , , ,
Category Research | No Comments »


Copyright 2010 - 2012 The Company of Biologists Ltd

Company of Biologists